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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0683400-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:28483812:28484488:1 gene:Os06g0683400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCCD1 description:Small calcium-binding protein with one EF-hand motif, Positive regulation of osmotic and salt tolerance (Os06t0683400-02)
Sequence

ATGGCGGCGGAGCAGAGACAGCAGCAGCAGATGATGCAGGAGGGGTTCGAGGACTACCTG
CCGGTGATGGCGGAGAGGCTGGGGGAGGAAGGGCTGATGCAGGAGCTCGCAAGCGGGTTC
CGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCG
CCGCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGC
GACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTC
AGCCCCGACCTCATGGACGAGCCTCGCCGGTGGCTCGACGACGCCGTCGCCCAGGCCTCA
CAGTTCCTCTTTCATTAG

Peptide Sequence

PEP ID

Os06t0683400-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:28483812:28484488:1 gene:Os06g0683400 transcript:Os06t0683400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCCD1 description:Small calcium-binding protein with one EF-hand motif, Positive regulation of osmotic and salt tolerance (Os06t0683400-02)
Sequence

MAAEQRQQQQMMQEGFEDYLPVMAERLGEEGLMQELASGFRLLMDPASGLITFDSLRRNA
PLLGLGGMSDDDLRGMLAEGDFDGDGALSEMEFCVLMVRLSPDLMDEPRRWLDDAVAQAS
QFLFH

Transcript Sequence

Transcript ID

Os06t0683400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28483812:28484488:1 gene:Os06g0683400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCCD1 description:Small calcium-binding protein with one EF-hand motif, Positive regulation of osmotic and salt tolerance (Os06t0683400-02)
Sequence

ATCCCTCTCCTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAAT
CGATCGATCAGTCAACCTCACTCATTCTCATGGCGGCGGAGCAGAGACAGCAGCAGCAGA
TGATGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGCGGAGAGGCTGGGGGAGGAAG
GGCTGATGCAGGAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCA
TCACCTTCGACAGCCTCCGCCGCAACGCGCCGCTGCTCGGCCTCGGCGGGATGTCCGACG
ACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGA
TGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCGCCGGT
GGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATG
GATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCA
GGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATG
TACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATTAATTGATCA
GCAAGCTTCTTCGTTTC