Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0683200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28472626:28474779:-1 gene:Os06g0683200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24, chloroplast precursor (CL24). (Os06t0683200-01)
Sequence	ATGGCCGGGGTGGCGGCGTTGCAGGGCGCGATGGCGTCCCTCTCCATCTCTGCGCCGGGG GCGGCGAGCACCAGCAGCTTCTGGGGCCACCCGCTCTCCACCTTCGCCGCCGCGCCGGCT GGGGTTAAATTTATGATCAAGACATGCCCAATTCAAATGAGGCTTAAGCGATGGGAGAGG AAGAAGTGTAAACCAAACAGTCTTCCTGTCCTGCACAAGATGCATGTTAGGATTGGCGAT ACAGTACAAGTCATTGCAGGCCGTGAGAAAGGTAAAGTTGGAGAAGTTACGCGGCTTTTT AAGCACAACAGCACTGTAATAGTGAAGGACTTGAACTTGAAGTCCAAGCACAAGAAAGGA ACAGAAGATGAACCGGGTGAAATCGTCATGATTGAAGGCCCCATTCACAGCTCAAATGTG ATGCTCTACTCAAAGGAAAAGAATGTGGCGAGTAGGGTTGGACACAAATTCCTTGAGGAT GGAACGAAGGTTCGGTACCTGGTCAAGACTGGTGAAATAATTGACAGTGCTGAGAATTGG GTCAAGGTGTTCAAGGAAGGAAGTTCGGAGTGA

Peptide Sequence

PEP ID	Os06t0683200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28472626:28474779:-1 gene:Os06g0683200 transcript:Os06t0683200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24, chloroplast precursor (CL24). (Os06t0683200-01)
Sequence	MAGVAALQGAMASLSISAPGAASTSSFWGHPLSTFAAAPAGVKFMIKTCPIQMRLKRWER KKCKPNSLPVLHKMHVRIGDTVQVIAGREKGKVGEVTRLFKHNSTVIVKDLNLKSKHKKG TEDEPGEIVMIEGPIHSSNVMLYSKEKNVASRVGHKFLEDGTKVRYLVKTGEIIDSAENW VKVFKEGSSE

Transcript Sequence

Transcript ID	Os06t0683200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28472626:28474779:-1 gene:Os06g0683200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24, chloroplast precursor (CL24). (Os06t0683200-01)
Sequence	ACACGAAGGCGTTCGTTATCCTCTGCTGCTTCTCTGCGGTTTGAGCGAGCGAGGGAGGAA GAGGAGGGGAGGAGACGAAGATGGCCGGGGTGGCGGCGTTGCAGGGCGCGATGGCGTCCC TCTCCATCTCTGCGCCGGGGGCGGCGAGCACCAGCAGCTTCTGGGGCCACCCGCTCTCCA CCTTCGCCGCCGCGCCGGCTGGGGTTAAATTTATGATCAAGACATGCCCAATTCAAATGA GGCTTAAGCGATGGGAGAGGAAGAAGTGTAAACCAAACAGTCTTCCTGTCCTGCACAAGA TGCATGTTAGGATTGGCGATACAGTACAAGTCATTGCAGGCCGTGAGAAAGGTAAAGTTG GAGAAGTTACGCGGCTTTTTAAGCACAACAGCACTGTAATAGTGAAGGACTTGAACTTGA AGTCCAAGCACAAGAAAGGAACAGAAGATGAACCGGGTGAAATCGTCATGATTGAAGGCC CCATTCACAGCTCAAATGTGATGCTCTACTCAAAGGAAAAGAATGTGGCGAGTAGGGTTG GACACAAATTCCTTGAGGATGGAACGAAGGTTCGGTACCTGGTCAAGACTGGTGAAATAA TTGACAGTGCTGAGAATTGGGTCAAGGTGTTCAAGGAAGGAAGTTCGGAGTGATCATGGT AGCATGGGAGTCCTGCACATTTTCTGAACTGCACTTTTTGTATGCCCAAATGAGTTGATG CTTTTCTAGATTCAGATTTCAGAGTCTTGTAAATTTCTATACAGTTGCCAACATTTTTTT GTATCCAATGACATGCTTGGCTTGTTAACCAGCTACTAGAATGGTTCAGCTACATTCGCT CATACAAATGATTTTGT