Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0681300-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:28390431:28396001:-1 gene:Os06g0681300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0681300-01);PAK-box/P21-Rho-binding domain containing protein. (Os06t0681300-02)
Sequence

ATGGAGATAAAGATGAAGGGGATATTCAAAGGTTTGAAGATAATCTCTCAAATATTCGCA
CTGCAGAAGCAACAAGAGATGGAAATCGGGTGCCCTACAGACGTCAGGCATGTGTCTCAC
ATAGGCGTGGGCACTAGTGATTCATGCCCAAGCTGGATGAGTGAATTCAGAGGATTGGAA
GAGTTGTCAGCAGGCTCCATGGGCTCCTTTGCACAGTCAAGGAAGACATCCTGGGCATCT
CAAGATTTTGACAAACCACCAAGAGCCACGCTCCCAACAGAAGTCTGCACAGACAAATCC
GGCCAGGAGGCCGCCTCCTGCTGCCATGACATCCCGAGAGGCCCCAAGAACCCGAGGAGG
AAGAAGGCAGCAAGAGCATCATCCGCGAGCTCCTTCTTGTCGAGGTCAAGGTCCTCCTCG
TTTGTGACAGCGTGCGGTGATTTCAGCGAGTTGCGTGGCGGCCTCCGAGTCGCCTAG

Peptide Sequence

PEP ID

Os06t0681300-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:28390431:28396001:-1 gene:Os06g0681300 transcript:Os06t0681300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0681300-01);PAK-box/P21-Rho-binding domain containing protein. (Os06t0681300-02)
Sequence

MEIKMKGIFKGLKIISQIFALQKQQEMEIGCPTDVRHVSHIGVGTSDSCPSWMSEFRGLE
ELSAGSMGSFAQSRKTSWASQDFDKPPRATLPTEVCTDKSGQEAASCCHDIPRGPKNPRR
KKAARASSASSFLSRSRSSSFVTACGDFSELRGGLRVA

Transcript Sequence

Transcript ID

Os06t0681300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28390431:28396001:-1 gene:Os06g0681300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0681300-01);PAK-box/P21-Rho-binding domain containing protein. (Os06t0681300-02)
Sequence

CTCCTATACCTCCCCTCGGCGGCGAGGCGGCGGAGCTCCGGCGAGCCTGGAGCACGTCGG
GGTTTCCCCTCCCGCGGCCTCGCCGTATCGGATCGCCGGCGTATGGCCTACGTCTACCTA
GGTATTCCTTCCATGCATGGCCTCCGTGCTCCGGCTAGCCGTCCCGCCCCCACGGTCGCC
GCCGTGTCCCCGCGTGCTGCCGGCCACCTCCGGGGCGCGGCGGTGCGGCGGGCTCAAGCT
GTAATCAGCCGAAGAGGCCTCGATATCCCTTATCCCACCACCTGCAGATAGTGATACAGT
GCTCCAAGTGTGCGCTAATTCTCTGAAGTCTGAACATGCCCTTGGCAACCGATTTAACCC
AGTGTCAGCGATACTCTATTAGTTGAGTTCAGATACTATGCGAGGAATTGAGAGACAGCC
GAGCTTCAGGTGTCCCTTTTGGTCGATTTGAAATTATATTAAGGGACGTAGACCAAATCA
CTATGCAAATGAGGAACAATGATGTTCTGAAATCTGTTTTGGATATGCAACTTCTATATT
TGCAAGGTACCTGCAGCTTATGAAGCCTGAAATCCTGGCAAGTACTGAGGCACCTCACCA
ATGGAGATAAAGATGAAGGGGATATTCAAAGGTTTGAAGATAATCTCTCAAATATTCGCA
CTGCAGAAGCAACAAGAGATGGAAATCGGGTGCCCTACAGACGTCAGGCATGTGTCTCAC
ATAGGCGTGGGCACTAGTGATTCATGCCCAAGCTGGATGAGTGAATTCAGAGGATTGGAA
GAGTTGTCAGCAGGCTCCATGGGCTCCTTTGCACAGTCAAGGAAGACATCCTGGGCATCT
CAAGATTTTGACAAACCACCAAGAGCCACGCTCCCAACAGAAGTCTGCACAGACAAATCC
GGCCAGGAGGCCGCCTCCTGCTGCCATGACATCCCGAGAGGCCCCAAGAACCCGAGGAGG
AAGAAGGCAGCAAGAGCATCATCCGCGAGCTCCTTCTTGTCGAGGTCAAGGTCCTCCTCG
TTTGTGACAGCGTGCGGTGATTTCAGCGAGTTGCGTGGCGGCCTCCGAGTCGCCTAGTTT
GAATGACAGTTCATATAGTTTTCTGGTGTGTGTTTTCTTCGTGCTGTTCGATCAGGAGGA
GAATAAAATCGCCTGAAATAATCGTATGAGCGTTGTGATGGATGCTAAGCGTCTAGATTA
GGGACATGTGTAATGTGTCCATGACTGAACAAACTATGCATTGTACTGCTTTTTTTGAGT
TTTGGCTATTTCTGAAGTTTG