Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0679500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28275643:28279473:1 gene:Os06g0679500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9 elicitor response-like protein. (Os06t0679500-01);Similar to Beta-1,3-galactosyltransferase sqv-2. (Os06t0679500-02)
Sequence	ATGAGCTGGAGGAGAGGGGACGGGGGCGTGGCGAGGAGATGGGTCCTGCTGCTCTGCACC GGGAGCTTCTTCCTCGGCCTGCTCTTCACCGACAGGATGTGGACACTGCCTGAGGTTACT GAAGTTGCCAGGCCAAATGGAAGGAGAGAGAAGGAGGATGAGCTTACTGCTGGAGACTGT AATTCTGCTAAGGTTAATGTAAAACGAGATTACAGGGAGATCCTACAAACCCAAGATACC CATCATGCTGTATGGACTTTGGATAAGACAATAGCAAAACTGGAGACAGAACTTTCCGCT GCGAGAACTCTGCAGGAATCATTTCTCAATGGTTCTCCGGTTTCAGAAGGGCATAAGGGT TCGGACTCTACAGGAAGGCAGAAATATCTTATGGTGATAGGCATTAATACTGCTTTTAGC AGTCGACAGAGAAGGGATTCTATCCGTAACACATGGATGCCTCAAGGAATAAAGAGAAGA AAACTAGAAGAAGAGAAGGGGATCGTAATCCGTTTTGTTATTGGTCACAGTGCTATTTCA GGTGGCATTGTGGAGAGAGCAATCAAGGCAGAGGAAAGAAAACATGGAGATTTCATGAGA ATAGACCATGTTGAAGGATACCTTGAATTGTCTGGCAAAACCAAGACATACTTTGCTACA GCTGTTTCTTTATGGGATGCTGACTTCTATGTGAAGGTTGACGATGATGTGCATGTTAAT ATAGCAACACTCGGACAGATTTTATCGAATCATGTTAAGAAGCCCAGAGTATATATTGGA TGCATGAAGTCCGGTCCCGTCTTATCTGACAAAGATGTGAGGTACTATGAACCTGAGCAT TGGAAATTTGGTGACCAGTATTTCCGGCATGCAACTGGTCAATTGTATGCTATTTCAAAA GATTTGGCAACTTACATATCAATAAACAAACGTGTTTTGCATAAGTACATCAATGAGGAT GTGTCTTTGGGAGCCTGGTTCATAGGATTAGATGTTGAGCATATTGATGAGCGCCGACTT TGTTGTGGTACTCCACCTGATTGCGAATGGAAAGCTCAGGCAGGGAATACATGCGCAGTG TCATTTGATTGGAAATGCAGTGGCATATGTGACTCTGTGGAGAACATGCAGTGGGTGCAC AATAGATGTGGAGAAAGCGAGAAATCTCTCTGGATTTCTTCTTTCTAA

Peptide Sequence

PEP ID	Os06t0679500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28275643:28279473:1 gene:Os06g0679500 transcript:Os06t0679500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9 elicitor response-like protein. (Os06t0679500-01);Similar to Beta-1,3-galactosyltransferase sqv-2. (Os06t0679500-02)
Sequence	MSWRRGDGGVARRWVLLLCTGSFFLGLLFTDRMWTLPEVTEVARPNGRREKEDELTAGDC NSAKVNVKRDYREILQTQDTHHAVWTLDKTIAKLETELSAARTLQESFLNGSPVSEGHKG SDSTGRQKYLMVIGINTAFSSRQRRDSIRNTWMPQGIKRRKLEEEKGIVIRFVIGHSAIS GGIVERAIKAEERKHGDFMRIDHVEGYLELSGKTKTYFATAVSLWDADFYVKVDDDVHVN IATLGQILSNHVKKPRVYIGCMKSGPVLSDKDVRYYEPEHWKFGDQYFRHATGQLYAISK DLATYISINKRVLHKYINEDVSLGAWFIGLDVEHIDERRLCCGTPPDCEWKAQAGNTCAV SFDWKCSGICDSVENMQWVHNRCGESEKSLWISSF

Transcript Sequence

Transcript ID	Os06t0679500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28275643:28279473:1 gene:Os06g0679500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9 elicitor response-like protein. (Os06t0679500-01);Similar to Beta-1,3-galactosyltransferase sqv-2. (Os06t0679500-02)
Sequence	TCCGCCTCCGCACTGCATTCCTTCCAGTTCGTTTCGTTGCCGTTCGCTCAGCGCTCGCTT CCACGGTTCCCCCACCCACCACGCGCATTCGCATTCGCATTCGCAGCAGCTGAGACTTGG GATATGGTTATGAATTCCAAGACCCTTGTTGCTCTCGATTCCCCCCCTTTCTTTCCTCAC TCTCCCTGAGCTGGTGGGTGGCGGCGGCGGCGGCGGCCATGAGCTGGAGGAGAGGGGACG GGGGCGTGGCGAGGAGATGGGTCCTGCTGCTCTGCACCGGGAGCTTCTTCCTCGGCCTGC TCTTCACCGACAGGATGTGGACACTGCCTGAGGTTACTGAAGTTGCCAGGCCAAATGGAA GGAGAGAGAAGGAGGATGAGCTTACTGCTGGAGACTGTAATTCTGCTAAGGTTAATGTAA AACGAGATTACAGGGAGATCCTACAAACCCAAGATACCCATCATGCTGTATGGACTTTGG ATAAGACAATAGCAAAACTGGAGACAGAACTTTCCGCTGCGAGAACTCTGCAGGAATCAT TTCTCAATGGTTCTCCGGTTTCAGAAGGGCATAAGGGTTCGGACTCTACAGGAAGGCAGA AATATCTTATGGTGATAGGCATTAATACTGCTTTTAGCAGTCGACAGAGAAGGGATTCTA TCCGTAACACATGGATGCCTCAAGGAATAAAGAGAAGAAAACTAGAAGAAGAGAAGGGGA TCGTAATCCGTTTTGTTATTGGTCACAGTGCTATTTCAGGTGGCATTGTGGAGAGAGCAA TCAAGGCAGAGGAAAGAAAACATGGAGATTTCATGAGAATAGACCATGTTGAAGGATACC TTGAATTGTCTGGCAAAACCAAGACATACTTTGCTACAGCTGTTTCTTTATGGGATGCTG ACTTCTATGTGAAGGTTGACGATGATGTGCATGTTAATATAGCAACACTCGGACAGATTT TATCGAATCATGTTAAGAAGCCCAGAGTATATATTGGATGCATGAAGTCCGGTCCCGTCT TATCTGACAAAGATGTGAGGTACTATGAACCTGAGCATTGGAAATTTGGTGACCAGTATT TCCGGCATGCAACTGGTCAATTGTATGCTATTTCAAAAGATTTGGCAACTTACATATCAA TAAACAAACGTGTTTTGCATAAGTACATCAATGAGGATGTGTCTTTGGGAGCCTGGTTCA TAGGATTAGATGTTGAGCATATTGATGAGCGCCGACTTTGTTGTGGTACTCCACCTGATT GCGAATGGAAAGCTCAGGCAGGGAATACATGCGCAGTGTCATTTGATTGGAAATGCAGTG GCATATGTGACTCTGTGGAGAACATGCAGTGGGTGCACAATAGATGTGGAGAAAGCGAGA AATCTCTCTGGATTTCTTCTTTCTAAGCAGGGCCACCGGAAGATCTGACATGACTAGCTG AATGCTACATTGTATAACAGATCAGAACATGTTGTACATTGTGCAGAAAATGTATTAGAT TCATCTTGTAGCAATAGTAGCTAAGCTAGGCTCAATTTTGTGATTGGGGCTCACCATACA CCGATACACCAACTATGCAGACCGTGGTTTCACTGAGACTGCCGGTGACGGTTGAGGGTA CATAGGCTGATCTACTTTTTCTCATGTTTTAGGTTGCCATTTTTGTTGTAACTTGTAAGG ATCTAATGTATTCTGTGCATTGTTACCAAGATATATACATATATGCAGAGCCTTTTCACT CTTC