Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0678200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28190959:28196204:-1 gene:Os06g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:solanesyl diphosphate synthase 1 description:Similar to Geranyl diphosphate synthase. (Os06t0678200-01)
Sequence	ATGTCGTGGCGGTGGGCTCTCGCGCGGCGCGTCGCCGCGCTGGGCGCGACGAGCGGCGGT GGGGACGGCGCCACCGCCCAGGCGCAGCGGCTCTTCTCCTCGGCGGCTGCCCTCCTCGGG AGGCACCCTCCACCGCCGTCGCCGCCGCACTACCAGATTCGGAGCAAGGTGGTGGGTTGC AGAGGAGCTACTTTCGTGAGCTCGCGATGGTTACATGATGCTCAGTACCAGGTTCGCCAG GATGGGTTATCAAGGTCTGAGGAACAGCAGGATCCATTTGAGTTGGTTGCTGATGAGTTG TCACTTCTTGCAAATAGGCTACGATCCATGGTAGCTGCTGAGGTCCCCAAACTGGCATCA GCTGCTGAGTATTTTTTTAAGGTGGGAGCTGAGGGTAAAAGATTCAGACCCACGGTATTA TTGTTGATGGCATCAGCTCTGAAATTCCCCTTATCAGATTCAACAGAAGTGGGAGTTTTA ACTATACTGGCAAATAAGCTCCGCACGAGACAGCAAAATATTGCCGAGATAACTGAAATG ATTCATGTTGCAAGCCTTCTACATGATGATGTACTGGATGATGCTGACACTAGGCGTGGC GTCAGTTCGTTGAATTGCATTATGGGGAACAAGCTTTCTGTTCTGGCTGGTGACTTCCTC CTGTCTAGAGCATGTGTGGCACTTGCAGCGCTTGGGAACACAGAGGTGGTATCTCTAATG GCTACTGCTGTAGAACATCTAGTTACTGGTGAAACCATGCAAATCTCCACAAGTAGAGAG CAAAGGCGAAGTATGGATTACTACTTGCAGAAGACGTACTACAAAACAGCATCATTGATA TCAAATAGCTGCAAGGCTGTCGCTATTCTTGCAGGGCACACTGCTGATGTGTCAATGCTC GCATATGAATATGGTCGAAACCTGGGTTTAGCCTTCCAGTTGATCGACGATGTTCTTGAT TTCACAGGCACTTCTGCATCCCTTGGGAAGGGTTCATTAACTGATATCCGTCATGGAATC ATTACCGCACCTATGCTTTATGCGATGGAAGAATTCCCACAACTACATGAAGTTGTTGAC AGGGGTTTTGACAATCCTGCAAATGTTGAGCTTGCTCTTGACTACCTACAGAAGAGCCGC GGGATTGAAAAGACGAAAGAGCTTGCAAGAGAACATGCTAACCGTGCAATCAAAGCCATA GAAGCTCTCCCAGACAGCGATGATGAAGATGTTCTGACATCAAGGCGTGCTCTTATTGAC ATCACAGAGAGAGTCATCACTAGAACAAAATAG

Peptide Sequence

PEP ID	Os06t0678200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28190959:28196204:-1 gene:Os06g0678200 transcript:Os06t0678200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:solanesyl diphosphate synthase 1 description:Similar to Geranyl diphosphate synthase. (Os06t0678200-01)
Sequence	MSWRWALARRVAALGATSGGGDGATAQAQRLFSSAAALLGRHPPPPSPPHYQIRSKVVGC RGATFVSSRWLHDAQYQVRQDGLSRSEEQQDPFELVADELSLLANRLRSMVAAEVPKLAS AAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTRQQNIAEITEM IHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLM ATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSML AYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAMEEFPQLHEVVD RGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPDSDDEDVLTSRRALID ITERVITRTK

Transcript Sequence

Transcript ID	Os06t0678200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28190959:28196204:-1 gene:Os06g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:solanesyl diphosphate synthase 1 description:Similar to Geranyl diphosphate synthase. (Os06t0678200-01)
Sequence	GCCTTCGTTTTTTTCTTTCTTCCCAGACTTTTTCTCCAAGTTCAACTCCGCCTCCTCCCT CCTCCCTCCCCCCGATCTCGGGAGCCATGTCGTGGCGGTGGGCTCTCGCGCGGCGCGTCG CCGCGCTGGGCGCGACGAGCGGCGGTGGGGACGGCGCCACCGCCCAGGCGCAGCGGCTCT TCTCCTCGGCGGCTGCCCTCCTCGGGAGGCACCCTCCACCGCCGTCGCCGCCGCACTACC AGATTCGGAGCAAGGTGGTGGGTTGCAGAGGAGCTACTTTCGTGAGCTCGCGATGGTTAC ATGATGCTCAGTACCAGGTTCGCCAGGATGGGTTATCAAGGTCTGAGGAACAGCAGGATC CATTTGAGTTGGTTGCTGATGAGTTGTCACTTCTTGCAAATAGGCTACGATCCATGGTAG CTGCTGAGGTCCCCAAACTGGCATCAGCTGCTGAGTATTTTTTTAAGGTGGGAGCTGAGG GTAAAAGATTCAGACCCACGGTATTATTGTTGATGGCATCAGCTCTGAAATTCCCCTTAT CAGATTCAACAGAAGTGGGAGTTTTAACTATACTGGCAAATAAGCTCCGCACGAGACAGC AAAATATTGCCGAGATAACTGAAATGATTCATGTTGCAAGCCTTCTACATGATGATGTAC TGGATGATGCTGACACTAGGCGTGGCGTCAGTTCGTTGAATTGCATTATGGGGAACAAGC TTTCTGTTCTGGCTGGTGACTTCCTCCTGTCTAGAGCATGTGTGGCACTTGCAGCGCTTG GGAACACAGAGGTGGTATCTCTAATGGCTACTGCTGTAGAACATCTAGTTACTGGTGAAA CCATGCAAATCTCCACAAGTAGAGAGCAAAGGCGAAGTATGGATTACTACTTGCAGAAGA CGTACTACAAAACAGCATCATTGATATCAAATAGCTGCAAGGCTGTCGCTATTCTTGCAG GGCACACTGCTGATGTGTCAATGCTCGCATATGAATATGGTCGAAACCTGGGTTTAGCCT TCCAGTTGATCGACGATGTTCTTGATTTCACAGGCACTTCTGCATCCCTTGGGAAGGGTT CATTAACTGATATCCGTCATGGAATCATTACCGCACCTATGCTTTATGCGATGGAAGAAT TCCCACAACTACATGAAGTTGTTGACAGGGGTTTTGACAATCCTGCAAATGTTGAGCTTG CTCTTGACTACCTACAGAAGAGCCGCGGGATTGAAAAGACGAAAGAGCTTGCAAGAGAAC ATGCTAACCGTGCAATCAAAGCCATAGAAGCTCTCCCAGACAGCGATGATGAAGATGTTC TGACATCAAGGCGTGCTCTTATTGACATCACAGAGAGAGTCATCACTAGAACAAAATAGC AACTGTTAGCATTCACAAGGTGGAGAACTGGAGATAAGGCTGATTTTCGCCACAGGCGTG GTGTTCCACATGGAAATTTTTGTACACTTTGGTCATTGCATTCTTTTTCATTGTCCAAGT TTTGTGTAGCGTGGATCAAAATTAGGATCTGAATCTATGGATCGGTATTCCTCAGGATCA CCCCCACTCTGCAGCTCTAGTGTTCTTAGTTACGGGTTGCAGCAAAATCTGTGCATTAGT ATTACTGATTGCAATTATCACCAGACTGTAGCACTGTAGCCATATAAGTGGAAGCTTGAA ACATAATATACGAGGAAAATGGATCGGCTCTCCTATCATGAGAGCACGATTTCGATATGT TTCCCTACACTTCTCTTGTTGCTTCTGAAGAGAAATCTTGTATGCTTAACTTTGATTGTT TTCAATCTTCCAAGATTAGGCGCATTACAAAATATATTGATGTGACCCACATTTTCA