Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0677700-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:28151297:28156417:1 gene:Os06g0677700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 description:YT521-B-like protein family protein. (Os06t0677700-00)
Sequence	ATGAGTCCCAAGTCCCAACTCCCAACCGGGGCAAAAAACCCTAAAAATTCTCTCTCCCCC ACCATGGACGACGGCGACCTCAGCTTCGACTTCGAGGGCGGCCTCGACCAGCCCCCCGCC GGCGGCGGCGGCGGCCCCGCGCCGCACTCGTCCGACCCCGGGGGCGTGGGCGGGGGCGGC GGCGGCGGCGGCCCCGGGGATGGCGGCGGGCACGGCCGCGGCCGCGGCCGCGGCAGCTAC CGGCAGACGGTGTGCCGGCACTGGCTCCGCGGCCTGTGCATGAAGGGGGAGGCCTGCGGG TTCCTGCACCAGTTCGACAAGGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGC GAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAAC ATGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTA CCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTC AATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACAT CCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCT CAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAG CAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCT GTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCA TCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAG GGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATT GAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAG ATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACG GCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAG AAAACACATCATCTGCGCAATCCATACAATGACAATCTCCCCGTTAAGATCAGCCGAGAT TGCCAGGAATTAGAACCCTTCATTGGTGAGCAATTGGCTTCACTGCTTTATCTAGAACCA GACAGCGAGCTGACGGCTATACTAATTGCAGCGGAGGCCAAGAAAGAAGAAGAAAAGGCT AAAGGAGTTAGTGCTGATGAGGCAGCTGACAATCAAGATATTGTGCTGTTTGATGACAAT GAAGAAGAGGAGGAAGAGGAAAGCGAGGAGGAAGAAGAGGGCAATGGCCAAGAATCTCAA GGAAGGGGAAGAGGAAGAGGGATGATGTGGCCACCTCAAATGCCAATGCTGCGTGGTGTT GGGCCAATGATGGGAGGGCGTGGCTTCCCTCCCAACATGATCGGCGACGGTTTTGGTTTT GGTGGTGGTTTTGGTATGCCTGATCCTTTTGGTGTGCCTCGTGGTTTTCCTCCATTTGGC CCAAGATTCCCTGGTGACTTCGCTAGAGGAGGTCCTATGCCTGGTATGGTCTTCCCCGGC AGGCCCCCACAACCTGGGGGCATGTTTCCTATGGGGCTAGAAATGATGATGGGTCCTGGT CGTGGACCGCTAATGGGAGGCTTGGGAATGGGTGGGCCTGGACGGCCAAATCGACCCGTT GGTATGGCTCCCTTCATGCCCCCACCACCTCCACCAAATAACCGTGGCACGAAGCGGGAG CAAAGAAGGCCAGGTGGTGAGAGGGGTGACAGGTATGAGACAACTTCAGATCAGGGAAGC AGGGGTCATGACGCCACTGGGAATTCTGGAGCAGAAGGAGCCAGGTCGCAGTCTGGGGAC AGATACGGTAGAAGCGCCCTCCGAGACGATGACAGTGAGAGTGACGAGGAAGCAGCGCCC AGGAGGTCGCGGAAACGATAA

Peptide Sequence

PEP ID	Os06t0677700-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:28151297:28156417:1 gene:Os06g0677700 transcript:Os06t0677700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 description:YT521-B-like protein family protein. (Os06t0677700-00)
Sequence	MSPKSQLPTGAKNPKNSLSPTMDDGDLSFDFEGGLDQPPAGGGGGPAPHSSDPGGVGGGG GGGGPGDGGGHGRGRGRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFG ECREPDCAYKHSYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSF NKFNQHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQ QQQQQQQQQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQ GIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGT AHYGRNFSIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEP DSELTAILIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEGNGQESQ GRGRGRGMMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFGFGGGFGMPDPFGVPRGFPPFG PRFPGDFARGGPMPGMVFPGRPPQPGGMFPMGLEMMMGPGRGPLMGGLGMGGPGRPNRPV GMAPFMPPPPPPNNRGTKREQRRPGGERGDRYETTSDQGSRGHDATGNSGAEGARSQSGD RYGRSALRDDDSESDEEAAPRRSRKR

Transcript Sequence

Transcript ID	Os06t0677700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28151297:28156417:1 gene:Os06g0677700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 description:YT521-B-like protein family protein. (Os06t0677700-00)
Sequence	ATGAGTCCCAAGTCCCAACTCCCAACCGGGGCAAAAAACCCTAAAAATTCTCTCTCCCCC ACCATGGACGACGGCGACCTCAGCTTCGACTTCGAGGGCGGCCTCGACCAGCCCCCCGCC GGCGGCGGCGGCGGCCCCGCGCCGCACTCGTCCGACCCCGGGGGCGTGGGCGGGGGCGGC GGCGGCGGCGGCCCCGGGGATGGCGGCGGGCACGGCCGCGGCCGCGGCCGCGGCAGCTAC CGGCAGACGGTGTGCCGGCACTGGCTCCGCGGCCTGTGCATGAAGGGGGAGGCCTGCGGG TTCCTGCACCAGTTCGACAAGGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGC GAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAAC ATGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTA CCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTC AATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACAT CCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCT CAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAG CAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCT GTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCA TCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAG GGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATT GAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAG ATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACG GCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAG AAAACACATCATCTGCGCAATCCATACAATGACAATCTCCCCGTTAAGATCAGCCGAGAT TGCCAGGAATTAGAACCCTTCATTGGTGAGCAATTGGCTTCACTGCTTTATCTAGAACCA GACAGCGAGCTGACGGCTATACTAATTGCAGCGGAGGCCAAGAAAGAAGAAGAAAAGGCT AAAGGAGTTAGTGCTGATGAGGCAGCTGACAATCAAGATATTGTGCTGTTTGATGACAAT GAAGAAGAGGAGGAAGAGGAAAGCGAGGAGGAAGAAGAGGGCAATGGCCAAGAATCTCAA GGAAGGGGAAGAGGAAGAGGGATGATGTGGCCACCTCAAATGCCAATGCTGCGTGGTGTT GGGCCAATGATGGGAGGGCGTGGCTTCCCTCCCAACATGATCGGCGACGGTTTTGGTTTT GGTGGTGGTTTTGGTATGCCTGATCCTTTTGGTGTGCCTCGTGGTTTTCCTCCATTTGGC CCAAGATTCCCTGGTGACTTCGCTAGAGGAGGTCCTATGCCTGGTATGGTCTTCCCCGGC AGGCCCCCACAACCTGGGGGCATGTTTCCTATGGGGCTAGAAATGATGATGGGTCCTGGT CGTGGACCGCTAATGGGAGGCTTGGGAATGGGTGGGCCTGGACGGCCAAATCGACCCGTT GGTATGGCTCCCTTCATGCCCCCACCACCTCCACCAAATAACCGTGGCACGAAGCGGGAG CAAAGAAGGCCAGGTGGTGAGAGGGGTGACAGGTATGAGACAACTTCAGATCAGGGAAGC AGGGGTCATGACGCCACTGGGAATTCTGGAGCAGAAGGAGCCAGGTCGCAGTCTGGGGAC AGATACGGTAGAAGCGCCCTCCGAGACGATGACAGTGAGAGTGACGAGGAAGCAGCGCCC AGGAGGTCGCGGAAACGATAAGGCGAGATTGAG