Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0677300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28133801:28138094:1 gene:Os06g0677300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-5, RING-V protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0677300-01)
Sequence	ATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAG GATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAA ATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCT AGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCT TCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGT GATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCA ACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACAT TCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATC AACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCA GTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGT GTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATT GAGGAGACAGTGGATGTTCCTGGAGATGGAGGCAAAGATATCCCTGAAGAAGAGGCAGTC TGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGC TGCAAAGGGGAACTTGCTCTTGCACACCAAGACTGCGCTGTCAAATGGTTTAGCATCAAG GGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTG AGAATACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCT CAACAATACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATAC TTCTGCTTCTTGGAACAACTTCTGGTTACAGATTTGCTGTCACACGCACTGGCAATTTCG TTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGTAACC AAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCAT ATCTTCTACAATGTGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACT GGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCT AGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGGAAGT AATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGAT AACATTGTATGA

Peptide Sequence

PEP ID	Os06t0677300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28133801:28138094:1 gene:Os06g0677300 transcript:Os06t0677300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-5, RING-V protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0677300-01)
Sequence	MDKAEEGQSSEPADSAAPAQDDSVQTASGHNSRRPNLSLQIPARTLDNQIGTSARINISP SPSSTRAGLPPRPNSTRTKSSLKSIIPQQSFRARSSAQEGDRAILLVPGTPSEGQQDNTS TLRSFSFRKVINSLSAKRTHSLPVTPIATSDKTSSPANQINNLPTTDDQDVQARIRRSLS VPGNRKNRSLRRADSLGVIRVIPTTPRPIPVNTTASSDGIEETVDVPGDGGKDIPEEEAV CRICLVELNEGGETLKMECSCKGELALAHQDCAVKWFSIKGNKICDVCKQEVQNLPVTLL RIPTQTANRRVTNGAHQRASQQYRFWQDIPILVMVSMLAYFCFLEQLLVTDLLSHALAIS LPFSCVLGLLSSMIASTMVTKSYLWAYASFQFAIVILFAHIFYNVLKVNPVLAVLLSSFT GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPGSNAVNENNGDRQQAQHRESGD NIV

Transcript Sequence

Transcript ID	Os06t0677300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28133801:28138094:1 gene:Os06g0677300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-5, RING-V protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0677300-01)
Sequence	GATGGAAAAAAAAAAGAACCATTTGCAAATTGCAAAAACGTCCTTTCTCCAGTTCTCCTC CCCTGAGCTTCTCCCAACAAGAACACCCACTTGCTCTCTTCCCCTCTCTCTCTCGCCCCT CGAATTCTGGCGGCGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCG CCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGC GAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTT CAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGC CTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGG CGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAG AAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACT CATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAA CTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAG CAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGG CGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATA CAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCAAAG ATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGG AAACACTTAAAATGGAGTGCAGCTGCAAAGGGGAACTTGCTCTTGCACACCAAGACTGCG CTGTCAAATGGTTTAGCATCAAGGGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTC AAAATTTGCCTGTCACTTTGTTGAGAATACCAACTCAAACTGCTAATAGGCGAGTAACAA ATGGTGCTCATCAAAGAGCCTCTCAACAATACAGATTTTGGCAGGACATTCCAATTTTGG TCATGGTTAGCATGCTTGCATACTTCTGCTTCTTGGAACAACTTCTGGTTACAGATTTGC TGTCACACGCACTGGCAATTTCGTTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCA TGATAGCATCCACCATGGTAACCAAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTG CTATTGTGATACTGTTTGCTCATATCTTCTACAATGTGTTAAAAGTAAATCCAGTCCTTG CGGTCCTACTATCCTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAG TGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATG GTCAGCGACAAGAACCTGGAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAG CGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGATTAAGAAGCGCAATGA ATGTGAATAGCTAGCTTTGATATGTTCAGTAGGTTTAGCTCGTCGAACTTCAGAATCACC TATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAG GCTATGTGACAAGTGAGAACATGGAGAATGCGGCGGATATAGTTAGGCAACACAGAGAGC TGAACCAAACTATCCATTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGG TTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAA GTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATAC AGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAAT TTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAAATAGA GAAGAACTGTATGCAGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGATGTTCGC TTC