Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0676000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28059549:28065154:-1 gene:Os06g0676000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 3 description:Integral membrane protein, Metal ion transport (Os06t0676000-01)
Sequence	ATGAGCGGCCCAATGCAACGCTCGTCGCAGCCACAGTTTATCTCTAGCGTCGAGCGGAAC AATCAATCGAATGGTCCTGGCACTCCTCTTATTGACAGCATAGATGTTGATCAGATTGTT ATTCCAGAGAAAAATAGTTGGAAGAACCTATTTTCATACATAGGGCCCGGATTTCTTGTC TCTATTGCGTATATTGATCCTGGAAATTTTGAGACAGACCTACAGGCTGGAGCACAGTAC AAATATGAGCTTCTTTGGATCATACTTATTGCGTCATGTGCTGCTCTTATAATTCAATCA CTTGCAGCTAGGCTAGGAGTCGTGACTGGGAAGCACCTGGCCGAGCATTGCAGAGCTGAA TATCCAAAGGCTACAAATTTCATATTATGGATTCTTGCGGAACTAGCTGTAGTTGCATGC GACATTCCTGAAGTAATTGGAACTGCTTTTGCTTTGAACATGCTCTTTAAAATCCCTGTG TGGTGTGGTGTTCTGATAACTGGACTCAGCACTCTGATGCTACTGTTACTACAACAATAT GGGGTCCGTAAACTGGAATTTCTGATAGCTATTCTGGTGTCATTAATAGCAACTTGTTTC TTAGTTGAGCTTGGGTATTCTAAACCAAATTCTTCAGAAGTTGTGAGGGGCCTTTTTGTT CCTGAACTTAAAGGGAATGGAGCCACAGGTCTTGCTATCTCACTACTTGGTGCTATGGTG ATGCCGCATAATCTTTTTCTCCACTCAGCATTGGTACTATCAAGAAAAGTGCCACGGTCA GTTCATGGGATCAAAGAGGCATGTAGATTCTATATGATTGAAAGTGCATTTGCCCTCACG ATAGCGTTCCTCATTAACATATCTATCATATCTGTTAGTGGTGCTGTCTGCGGGTCAGAT AATTTGAGTCCTGAAGACCAGATGAATTGCAGTGATCTTGATCTTAACAAAGCTTCGTTT TTGTTAAAGAATGTCCTCGGAAACTGGAGCTCAAAGTTATTTGCAGTAGCCTTGTTGGCG TCTGGCCAGAGTTCTACAATTACAGGAACTTATGCGGGACAATATGTCATGCAGGGGTTT CTAGATCTTCGGATGACACCCTGGATACGGAACCTTCTAACTAGGTCCTTGGCAATTCTG CCAAGTCTGATTGTTTCGATAATTGGAGGTTCCTCAGCAGCTGGACAGTTGATTATCATT GCATCGATGATACTGTCATTTGAGCTTCCTTTTGCTCTAGTTCCACTCCTAAAATTCACA AGCAGCAGGACAAAAATGGGGCAGCACACAAATTCAAAAGCCATTTCTGTGATAACATGG GGAATTGGTTCGTTTATCGTTGTCATCAACACCTACTTCCTGATAACAAGCTTTGTCAAG CTGCTTCTCCACAACGGTCTATCGACTGTATCCCAAGTATTCTCCGGGATATTCGGTTTC CTGGGGATGCTCATATACATGGCTGCAATTCTCTACCTCGTTTTCCGGAAGAACAGGAAA GCTACCCTGCCATTGCTGGAGGGCGATTCGACGGTCCGCATAGTAGGTCGCGACACGGCC ACTGAAGGAGAAGGTTCTCTTGGCCATCTGCCCCGGGAGGACATCTCCAGCATGCAGCTT CCTCAGCAGCGAACTGCTTCTGATCTCGATTAG

Peptide Sequence

PEP ID	Os06t0676000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28059549:28065154:-1 gene:Os06g0676000 transcript:Os06t0676000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 3 description:Integral membrane protein, Metal ion transport (Os06t0676000-01)
Sequence	MSGPMQRSSQPQFISSVERNNQSNGPGTPLIDSIDVDQIVIPEKNSWKNLFSYIGPGFLV SIAYIDPGNFETDLQAGAQYKYELLWIILIASCAALIIQSLAARLGVVTGKHLAEHCRAE YPKATNFILWILAELAVVACDIPEVIGTAFALNMLFKIPVWCGVLITGLSTLMLLLLQQY GVRKLEFLIAILVSLIATCFLVELGYSKPNSSEVVRGLFVPELKGNGATGLAISLLGAMV MPHNLFLHSALVLSRKVPRSVHGIKEACRFYMIESAFALTIAFLINISIISVSGAVCGSD NLSPEDQMNCSDLDLNKASFLLKNVLGNWSSKLFAVALLASGQSSTITGTYAGQYVMQGF LDLRMTPWIRNLLTRSLAILPSLIVSIIGGSSAAGQLIIIASMILSFELPFALVPLLKFT SSRTKMGQHTNSKAISVITWGIGSFIVVINTYFLITSFVKLLLHNGLSTVSQVFSGIFGF LGMLIYMAAILYLVFRKNRKATLPLLEGDSTVRIVGRDTATEGEGSLGHLPREDISSMQL PQQRTASDLD

Transcript Sequence

Transcript ID	Os06t0676000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28059549:28065154:-1 gene:Os06g0676000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BACTERIOCIDE EFFECT 3 description:Integral membrane protein, Metal ion transport (Os06t0676000-01)
Sequence	GCCACGACGTCAACCCTCTCTCGTCTCTCTTCTCCTAGCCGACGCGACGACGACGACGAC GTCGTCGGTGTCGCCTCCGCGCGCGCGGCGCGCTGCTCCCCTGCACGCCGCCGCCGACCC ACGGAGAGGACTCCCCACCCATCCCAGGTACGGCGCCTCGCCGCGTTCTCTTCTCCAGGT TCGCTTTGCAGAACTCCCTAACAAGAACCAGATCCAACCCGACCACCGCTCCAAGTCTTG AGGGTTCTTGCATTGGGAGAGGGGGAGATGAGCGGCCCAATGCAACGCTCGTCGCAGCCA CAGTTTATCTCTAGCGTCGAGCGGAACAATCAATCGAATGGTCCTGGCACTCCTCTTATT GACAGCATAGATGTTGATCAGATTGTTATTCCAGAGAAAAATAGTTGGAAGAACCTATTT TCATACATAGGGCCCGGATTTCTTGTCTCTATTGCGTATATTGATCCTGGAAATTTTGAG ACAGACCTACAGGCTGGAGCACAGTACAAATATGAGCTTCTTTGGATCATACTTATTGCG TCATGTGCTGCTCTTATAATTCAATCACTTGCAGCTAGGCTAGGAGTCGTGACTGGGAAG CACCTGGCCGAGCATTGCAGAGCTGAATATCCAAAGGCTACAAATTTCATATTATGGATT CTTGCGGAACTAGCTGTAGTTGCATGCGACATTCCTGAAGTAATTGGAACTGCTTTTGCT TTGAACATGCTCTTTAAAATCCCTGTGTGGTGTGGTGTTCTGATAACTGGACTCAGCACT CTGATGCTACTGTTACTACAACAATATGGGGTCCGTAAACTGGAATTTCTGATAGCTATT CTGGTGTCATTAATAGCAACTTGTTTCTTAGTTGAGCTTGGGTATTCTAAACCAAATTCT TCAGAAGTTGTGAGGGGCCTTTTTGTTCCTGAACTTAAAGGGAATGGAGCCACAGGTCTT GCTATCTCACTACTTGGTGCTATGGTGATGCCGCATAATCTTTTTCTCCACTCAGCATTG GTACTATCAAGAAAAGTGCCACGGTCAGTTCATGGGATCAAAGAGGCATGTAGATTCTAT ATGATTGAAAGTGCATTTGCCCTCACGATAGCGTTCCTCATTAACATATCTATCATATCT GTTAGTGGTGCTGTCTGCGGGTCAGATAATTTGAGTCCTGAAGACCAGATGAATTGCAGT GATCTTGATCTTAACAAAGCTTCGTTTTTGTTAAAGAATGTCCTCGGAAACTGGAGCTCA AAGTTATTTGCAGTAGCCTTGTTGGCGTCTGGCCAGAGTTCTACAATTACAGGAACTTAT GCGGGACAATATGTCATGCAGGGGTTTCTAGATCTTCGGATGACACCCTGGATACGGAAC CTTCTAACTAGGTCCTTGGCAATTCTGCCAAGTCTGATTGTTTCGATAATTGGAGGTTCC TCAGCAGCTGGACAGTTGATTATCATTGCATCGATGATACTGTCATTTGAGCTTCCTTTT GCTCTAGTTCCACTCCTAAAATTCACAAGCAGCAGGACAAAAATGGGGCAGCACACAAAT TCAAAAGCCATTTCTGTGATAACATGGGGAATTGGTTCGTTTATCGTTGTCATCAACACC TACTTCCTGATAACAAGCTTTGTCAAGCTGCTTCTCCACAACGGTCTATCGACTGTATCC CAAGTATTCTCCGGGATATTCGGTTTCCTGGGGATGCTCATATACATGGCTGCAATTCTC TACCTCGTTTTCCGGAAGAACAGGAAAGCTACCCTGCCATTGCTGGAGGGCGATTCGACG GTCCGCATAGTAGGTCGCGACACGGCCACTGAAGGAGAAGGTTCTCTTGGCCATCTGCCC CGGGAGGACATCTCCAGCATGCAGCTTCCTCAGCAGCGAACTGCTTCTGATCTCGATTAG AAAGATGGCATACAAATACTCAAATCAATCACCAAAGAAATATACCACTGATGATAATCA TGCAGCTAGTAGCTACCTACATAGCCCAAAGAGTTAGCCAGCTGATCCCTCAGGTATTCA CCTGGATCATCCTAGTGAATACTGCATACTACTAATTCCACATATATAGTGACAATAATT TTGTCTTGATATCTGGTACTGCCGATTGTACACGATGGTTAGCTAACTGTGATCCTGTGA CACCAAAGCTTCTTACTTAGAATCTTATACATTTCG