Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0675200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:28018171:28019815:-1 gene:Os06g0675200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0675200-01)
Sequence

ATGGCCTCCGCCGTCGCGAGTAACTTGCCTGCAGCTGCGCCCGCGGCTGTCATGCCGTTC
GGTGGATGGCATGGTCCGCGTGTCTCGTTCAGCCGCGACGCCGCCGGGGCTGAGGAGGCT
GCCGCGGTGGTCGTGTGTTCTTCGCCCCTGGCCGCCGCGGCGGCGGTGGCGACGACGACG
ACGCCGGAGCCGGCGATATCCAAGGACTTCATCGACTTCGAGTTCAGCCTCGGGGGCTCC
GCCACCATGCTCCCGGCGGACGAGCTCTTTGCCGACGGGAAGCTGCTCCCGCTTCGGAAG
GCGGCGGCTGTGCCGGAGATGGATGCGGCGGCGCCACGGCCGCCGCAGCCTGAGGCAATG
CCGGCGCCTTCGGAGCCGATGAAGCCACTACGGGCGGCTACCGCCGCGGTTGACGCCGCC
GACCCGTACGTTTTCTCTCCTAAGGCGCCCAGCTGCTCGAGCCGGTGGCGGGAGTTGCTC
GGGCTGAAGAGAGCGGCAGCGCAGAGCCCGAAGCCATCGCCGTCGTCTGCGCCCGCGAGA
ACCCCCGGGAGAGCGATGAACTCGACGGCGGCGAGGTCGCTGAAGCTGCTGCTCCAACGG
AACAACGGCCGCTCGTCCGGGGCCTCCGCGTCGGAGCTCGCCTCTGCGCCGCTCCTCCGC
GACAGCTCCGACTCGGAGGCGTCTCTCTCCCTCGCCTCCTCCCGCTTCTCCCTCTCGTCG
TCGTCGTCTTCCTCCGGCCACGACCACGACGACATCCCGCGCCTCTCCCTCGACTCCGCC
GCTGACCCCAACCCGCCCCGCATCCGCCTCGTCCGTTCCTCCCACCGCCACTCCACCTCC
TCATCCTCCTCATCCCGCGCCGGCCGAAGCCCCGCGCGCCGCCGCCCCTCCCCGCCGCCG
CCGCCGCGCTGCCTCTCCGTCGACTCCCCGCGCATGAACTCCTCCGGCAAGATCGTGTTC
CAGGGCCTGGAGCGCAGCTCCAGCTCACCGTGCACCCTCCACGCCGCGGCGAAGCCACGC
TCCCGCGCCGTCGACCGGTCATACTCCTCCGGCGTCCGCGTGGCGCCGGTGGTGCTGAAC
GTGCCGGTGTGCTCGCGGCCGGTGTTCGGGTTCTTCAAGGACAAGAAGGACGCGGCGGCG
AAGGACGCCATGGCGGCGAGGACGAGGTCGTCGCTGGGGCGGAAGACGACGGCGGCGCCG
CAAGGGTGGAGCGGCGAGCTGGGGAGATCTTGTGGGTAA

Peptide Sequence

PEP ID

Os06t0675200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:28018171:28019815:-1 gene:Os06g0675200 transcript:Os06t0675200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0675200-01)
Sequence

MASAVASNLPAAAPAAVMPFGGWHGPRVSFSRDAAGAEEAAAVVVCSSPLAAAAAVATTT
TPEPAISKDFIDFEFSLGGSATMLPADELFADGKLLPLRKAAAVPEMDAAAPRPPQPEAM
PAPSEPMKPLRAATAAVDAADPYVFSPKAPSCSSRWRELLGLKRAAAQSPKPSPSSAPAR
TPGRAMNSTAARSLKLLLQRNNGRSSGASASELASAPLLRDSSDSEASLSLASSRFSLSS
SSSSSGHDHDDIPRLSLDSAADPNPPRIRLVRSSHRHSTSSSSSSRAGRSPARRRPSPPP
PPRCLSVDSPRMNSSGKIVFQGLERSSSSPCTLHAAAKPRSRAVDRSYSSGVRVAPVVLN
VPVCSRPVFGFFKDKKDAAAKDAMAARTRSSLGRKTTAAPQGWSGELGRSCG

Transcript Sequence

Transcript ID

Os06t0675200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28018171:28019815:-1 gene:Os06g0675200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0675200-01)
Sequence

AGCCCTATCTAGTGACACCCATAAAAACCAGTGTGTGTGATTAGTACCGTACCGGCAGTC
TAGTGAGATCGGGTACCACGAGATATACTTCTTCTTGTCGCGCTGCTTACCGTTGATGCG
CTTAGCCGCCGCCTGCCATGGCCTCCGCCGTCGCGAGTAACTTGCCTGCAGCTGCGCCCG
CGGCTGTCATGCCGTTCGGTGGATGGCATGGTCCGCGTGTCTCGTTCAGCCGCGACGCCG
CCGGGGCTGAGGAGGCTGCCGCGGTGGTCGTGTGTTCTTCGCCCCTGGCCGCCGCGGCGG
CGGTGGCGACGACGACGACGCCGGAGCCGGCGATATCCAAGGACTTCATCGACTTCGAGT
TCAGCCTCGGGGGCTCCGCCACCATGCTCCCGGCGGACGAGCTCTTTGCCGACGGGAAGC
TGCTCCCGCTTCGGAAGGCGGCGGCTGTGCCGGAGATGGATGCGGCGGCGCCACGGCCGC
CGCAGCCTGAGGCAATGCCGGCGCCTTCGGAGCCGATGAAGCCACTACGGGCGGCTACCG
CCGCGGTTGACGCCGCCGACCCGTACGTTTTCTCTCCTAAGGCGCCCAGCTGCTCGAGCC
GGTGGCGGGAGTTGCTCGGGCTGAAGAGAGCGGCAGCGCAGAGCCCGAAGCCATCGCCGT
CGTCTGCGCCCGCGAGAACCCCCGGGAGAGCGATGAACTCGACGGCGGCGAGGTCGCTGA
AGCTGCTGCTCCAACGGAACAACGGCCGCTCGTCCGGGGCCTCCGCGTCGGAGCTCGCCT
CTGCGCCGCTCCTCCGCGACAGCTCCGACTCGGAGGCGTCTCTCTCCCTCGCCTCCTCCC
GCTTCTCCCTCTCGTCGTCGTCGTCTTCCTCCGGCCACGACCACGACGACATCCCGCGCC
TCTCCCTCGACTCCGCCGCTGACCCCAACCCGCCCCGCATCCGCCTCGTCCGTTCCTCCC
ACCGCCACTCCACCTCCTCATCCTCCTCATCCCGCGCCGGCCGAAGCCCCGCGCGCCGCC
GCCCCTCCCCGCCGCCGCCGCCGCGCTGCCTCTCCGTCGACTCCCCGCGCATGAACTCCT
CCGGCAAGATCGTGTTCCAGGGCCTGGAGCGCAGCTCCAGCTCACCGTGCACCCTCCACG
CCGCGGCGAAGCCACGCTCCCGCGCCGTCGACCGGTCATACTCCTCCGGCGTCCGCGTGG
CGCCGGTGGTGCTGAACGTGCCGGTGTGCTCGCGGCCGGTGTTCGGGTTCTTCAAGGACA
AGAAGGACGCGGCGGCGAAGGACGCCATGGCGGCGAGGACGAGGTCGTCGCTGGGGCGGA
AGACGACGGCGGCGCCGCAAGGGTGGAGCGGCGAGCTGGGGAGATCTTGTGGGTAATTTG
ACTCTTGTTTGACCGGTTAGTTGCTGTTGGGATTTGTCTTGTTTGCTGCTGCCGGTATGA
TGAGTGCACGGAAAGGGAAAGGGGGAGGCCATGATGAGATGATAGTTTGGTTTTAACTGA
TTTTGTTTGTTCTTTGGAGACGCCTCATGGAAGGTCTAATCAATTGACTGTTCTTTTTTT
CTTCTTTCTTTCTTTCTCTTAGAACTGTATATTCCGAATTTTGTTTCTGTCTCGCACCAT
CAAAGTTGATCTTCTTTCTTCTTTT