Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0670100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:27756424:27760044:-1 gene:Os06g0670100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0670100-01)
Sequence

ATGTGCCGGTGCGCGGCGGCGATCGCGAGGGCGGTGGTGGAGTTCCTCGACGCCGTCCTC
GTCGGCTTCTTCCTCTCCTTCTTCGGCCCCCACCCCCGCGACCGCGACCGCGACGACAGC
CCCGGCTCCGGCCGCCGCGATTCGCTCGCGCACAAGGATCGGCTCGGGGAGCTGCTCTCG
GACGACGATGAGCTAGGATTGGGAGGGAGGGGAGGATCTCATGAGGATTTGGCTGATGAT
TGTGGCAGCGATGAGGAGCTTCGATCCGAGGCAAATTTCCTCAAGTTATGTGGCACACTA
TTTGAAACACCAGCTGAACTCCATAACATATCCTATCAAATCAATATGGAAAGTTACATT
GAGCATGATAAAATTCCCACAAATGTACTGGCAGTGGAAGCAACTCCAGCATTTGAATCT
AAATCATCTGGAGGCTTTGAATATGGGGAGGATCATATCTTGACGCCTCAACTTAACACT
GAAGATACTGAACATCTTCCACTAGTTAAATCAGTTTATCAATCAGCTATCCGAGGCAAC
TCCCCCTTCCAGAACATCAAAAGCATCAACGATGGTTCCAGTGATTCACCCTTTCATACT
CCTCTAGTATTGAGAGATGATATGCAGACCCCCAGAACTGTTTATACTTCACATAAAGGA
TCGTCTGGAAAGCGTGTGCGGACCCGCAAACAATTCGCATATCCCATCTTTAGACCAACA
GAGAACAAGCTTCAGAAGATGCAACTTTCAGATTCTGCCAAGATGACACAGCAGATCTCT
TCAGATTCAGTGGTTAAAGGAGAATCACTCAATTCTTCACATTTCCCTCTTGAGGTGTCT
AAGTATCAGCTCGACCGCCAAAGGCTATTGGATGCTGGAGAGAGATCAAAGTCCAATTCA
GATGAAAATATTGAGGTGTGCAGTCTATCACGCTGGCTTAAATCTTCACCCGCAGGAAAC
ACGAACCAAATGTACGATGAGAACAATCTTATCGAAGAGGGACATGCCTTTATGACTTCT
GAGGATAATGTGGATGTGGACAATCATACTCCGAGGTTGTCCAAGGCTCGGGATTGCCAC
TGTATTCCAAACACAAGTAGAAAATATGGAGAGGATCAACATGTCAGCTGGCATTCCACA
CCCTTTGAGGAAAGGTTGATAAAGGTTTTGTCTGACGAGGAGGTGCCCCCTACAAGGAAA
CTTGTCCCTGGAAGGCTTCTCTATCTTGAGGAAAGAGTTTGA

Peptide Sequence

PEP ID

Os06t0670100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:27756424:27760044:-1 gene:Os06g0670100 transcript:Os06t0670100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0670100-01)
Sequence

MCRCAAAIARAVVEFLDAVLVGFFLSFFGPHPRDRDRDDSPGSGRRDSLAHKDRLGELLS
DDDELGLGGRGGSHEDLADDCGSDEELRSEANFLKLCGTLFETPAELHNISYQINMESYI
EHDKIPTNVLAVEATPAFESKSSGGFEYGEDHILTPQLNTEDTEHLPLVKSVYQSAIRGN
SPFQNIKSINDGSSDSPFHTPLVLRDDMQTPRTVYTSHKGSSGKRVRTRKQFAYPIFRPT
ENKLQKMQLSDSAKMTQQISSDSVVKGESLNSSHFPLEVSKYQLDRQRLLDAGERSKSNS
DENIEVCSLSRWLKSSPAGNTNQMYDENNLIEEGHAFMTSEDNVDVDNHTPRLSKARDCH
CIPNTSRKYGEDQHVSWHSTPFEERLIKVLSDEEVPPTRKLVPGRLLYLEERV

Transcript Sequence

Transcript ID

Os06t0670100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27756424:27760044:-1 gene:Os06g0670100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0670100-01)
Sequence

GCCTCTCTCCTCGTCGGCGGGAAGGGCCGCGACGCGACGACGATGTGCCGGTGCGCGGCG
GCGATCGCGAGGGCGGTGGTGGAGTTCCTCGACGCCGTCCTCGTCGGCTTCTTCCTCTCC
TTCTTCGGCCCCCACCCCCGCGACCGCGACCGCGACGACAGCCCCGGCTCCGGCCGCCGC
GATTCGCTCGCGCACAAGGATCGGCTCGGGGAGCTGCTCTCGGACGACGATGAGCTAGGA
TTGGGAGGGAGGGGAGGATCTCATGAGGATTTGGCTGATGATTGTGGCAGCGATGAGGAG
CTTCGATCCGAGGCAAATTTCCTCAAGTTATGTGGCACACTATTTGAAACACCAGCTGAA
CTCCATAACATATCCTATCAAATCAATATGGAAAGTTACATTGAGCATGATAAAATTCCC
ACAAATGTACTGGCAGTGGAAGCAACTCCAGCATTTGAATCTAAATCATCTGGAGGCTTT
GAATATGGGGAGGATCATATCTTGACGCCTCAACTTAACACTGAAGATACTGAACATCTT
CCACTAGTTAAATCAGTTTATCAATCAGCTATCCGAGGCAACTCCCCCTTCCAGAACATC
AAAAGCATCAACGATGGTTCCAGTGATTCACCCTTTCATACTCCTCTAGTATTGAGAGAT
GATATGCAGACCCCCAGAACTGTTTATACTTCACATAAAGGATCGTCTGGAAAGCGTGTG
CGGACCCGCAAACAATTCGCATATCCCATCTTTAGACCAACAGAGAACAAGCTTCAGAAG
ATGCAACTTTCAGATTCTGCCAAGATGACACAGCAGATCTCTTCAGATTCAGTGGTTAAA
GGAGAATCACTCAATTCTTCACATTTCCCTCTTGAGGTGTCTAAGTATCAGCTCGACCGC
CAAAGGCTATTGGATGCTGGAGAGAGATCAAAGTCCAATTCAGATGAAAATATTGAGGTG
TGCAGTCTATCACGCTGGCTTAAATCTTCACCCGCAGGAAACACGAACCAAATGTACGAT
GAGAACAATCTTATCGAAGAGGGACATGCCTTTATGACTTCTGAGGATAATGTGGATGTG
GACAATCATACTCCGAGGTTGTCCAAGGCTCGGGATTGCCACTGTATTCCAAACACAAGT
AGAAAATATGGAGAGGATCAACATGTCAGCTGGCATTCCACACCCTTTGAGGAAAGGTTG
ATAAAGGTTTTGTCTGACGAGGAGGTGCCCCCTACAAGGAAACTTGTCCCTGGAAGGCTT
CTCTATCTTGAGGAAAGAGTTTGAGCCTGAAGAAAGAGTGTTGTGGCGATATTTGAGTTC
AAACGTGGATGAAATCGTATCATCGAACTCTGAAGTTGTGCACTCTCAAATGTGGACCAG
CATGTCATTGCACAAAGTGGACTGAAACACAACTTACAGTACTGCGTTTTCTCTTGCATC
ATCATCATATACCTGCCACTGTGCTTTTGCTTGCTCCCTGTTGTTACGAGACGTGATGCT
CTGTACATATGGTATGGGCTATACCTGCTATGATTTCTTAACTGCTTCTACTTCTAGACC
TTTAGGTTGACAATGTAAGTGTTTTTACTTAGCTGTCCTCTAGTTTCTAGAGCCATTTCC
CCTTCAGGTACAAGGGATCAAATTCAAATGGCGTCGTATAGCATAGAGCAATCTGACCTT
CTAGTTAAGGCATTTCATCGTGTATGCAACATGCCCTCACCTCTCCTTGTTAATAGATAC
TGTCATATCCACTTAATATGTAATCATTTGCG