Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0667200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:27637555:27641578:1 gene:Os06g0667200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 30 description:MADS-box transcription factor, Vegetative development (Os06t0667200-01)
Sequence

ATGGGGCAAGGGAAGATCGAGATGAAGAGGATCGAGGACGCGACGAGGCGGCAGGTGACG
TTCAGCAAGCGCAGGGCTGGGTTTCTCAAGAAGGCGAACGAGCTCGCCGTGCTGTGCGAT
GCGCAGGTCGGCGTCGTCGTCTTCTCCGACAAGGGCAAGCTCTTCGACTTCTGCAGCCCG
CCGGTCATCTTGATGGAGCTGTTTCACCGTTATGAGATCACCACCAGAAACACTCGGCTT
CAGGAGACAAACCGTGATGATGAGCAAATGGTCATGGAGATCACAAGGCTAAGGAATGAG
ATCGACCAGCTCGAAGCCAGTTTAAGGAGGCAAACTGGAGAAGACCTGTCATCTGTGTCC
ACAGTGGATGAGCTCAGCCAGCTGCAGCTGCAGCTTGAATCATCTCTCAGCAAAGTTCAT
GCGAGGAAGGATGAGCTCATGAGCCAGCAGCTGGAGGATATGCGTCGCATGCATCAGACC
GTGCATGAGCAGAACAATTTCTTGTGCCGCATGGTAACTAAAATACTCCTACTAAATGTG
ATCACAATAATGATACTTGCTGCCATGATTTCTATCACTCATGCACGCATTGCCCTTGAT
GATTGTATGCAGTTGGGATATATTGTCATCAAGCAAGAAAATTCTTGGCGATTCTGGTTT
ATATGA

Peptide Sequence

PEP ID

Os06t0667200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:27637555:27641578:1 gene:Os06g0667200 transcript:Os06t0667200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 30 description:MADS-box transcription factor, Vegetative development (Os06t0667200-01)
Sequence

MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP
PVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVS
TVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKILLLNV
ITIMILAAMISITHARIALDDCMQLGYIVIKQENSWRFWFI

Transcript Sequence

Transcript ID

Os06t0667200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27637555:27641578:1 gene:Os06g0667200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 30 description:MADS-box transcription factor, Vegetative development (Os06t0667200-01)
Sequence

AGCTCGAAGGAAGCCGTTCCAGTGTCTCACAAGCCAAGGTAAAGAAAAAAAAGAGAGAGA
AAAAAACAGAGAAGGAAATCAAGAGAAGAACACCATTTGATTCTCCTCTCTGCTCACTCC
TTCTCCTTCTTCTGTTTGTCCGTCTTGGATTGGAGCTAGCACTTCTTTGACTGCCCTTGT
TCATCGAGGCGGCGAGGCGAGGTCGCGATGGGGCAAGGGAAGATCGAGATGAAGAGGATC
GAGGACGCGACGAGGCGGCAGGTGACGTTCAGCAAGCGCAGGGCTGGGTTTCTCAAGAAG
GCGAACGAGCTCGCCGTGCTGTGCGATGCGCAGGTCGGCGTCGTCGTCTTCTCCGACAAG
GGCAAGCTCTTCGACTTCTGCAGCCCGCCGGTCATCTTGATGGAGCTGTTTCACCGTTAT
GAGATCACCACCAGAAACACTCGGCTTCAGGAGACAAACCGTGATGATGAGCAAATGGTC
ATGGAGATCACAAGGCTAAGGAATGAGATCGACCAGCTCGAAGCCAGTTTAAGGAGGCAA
ACTGGAGAAGACCTGTCATCTGTGTCCACAGTGGATGAGCTCAGCCAGCTGCAGCTGCAG
CTTGAATCATCTCTCAGCAAAGTTCATGCGAGGAAGGATGAGCTCATGAGCCAGCAGCTG
GAGGATATGCGTCGCATGCATCAGACCGTGCATGAGCAGAACAATTTCTTGTGCCGCATG
GTAACTAAAATACTCCTACTAAATGTGATCACAATAATGATACTTGCTGCCATGATTTCT
ATCACTCATGCACGCATTGCCCTTGATGATTGTATGCAGTTGGGATATATTGTCATCAAG
CAAGAAAATTCTTGGCGATTCTGGTTTATATGACTTCCTGGAAGCAGTAGGAACAACAAG
AGTTACTGAACCAGAAATTGAACTTGCCTTCTTCATGCATCAGATGAACCATAAAGGGAA
CAACACTACTACCCTCTCCAAAATTGAGCTGCTCAGGACTTCGTAGAAATTTACAGCTTC
AGGACATGTGATTTATCCATTCTCTTTTACTGTTTATTCTAAAATGCAAAAAAAAAAGAA
ATTTTGTTGTAGCTTAGATTAAGGCAGCCTCAGCTTTGTGGTTTGCCAAGCCATGTACTG
ATATATGAATGTGATACTTTAATTAATGTTGAAACGCATGATTATGTATTTGAACTGAAT
TGACTGAATGTGTCCTGGAATCGGTTTAGAACTTAATATATCAATCAGACTTTTGTTC