Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0667000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:27622771:27626271:1 gene:Os06g0667000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0667000-01)
Sequence	ATGGCAATGCCAGTTGGAGTTGCACCGGTGTTGTTACTGTTGCTTTTGCCATTGGCGGCG GCGACGGCGGCGGCGGAGAGTGACGACAGGGACGCGCTGATGGCGTTCAAGGCCGGCGTG ACGTCGGACCCGACCGGCGTGCTCCGGTCGTGGAACGAGACGGTGCACTTCTGCCGGTGG CCGGGGGTGAACTGCACGGCGGGGCGCGTCACGTCGCTGGACGTGTCCATGGGCCGCCTC GCCGGCGAGCTCTCGCCGGCCGTCGCCAACCTCACGCGGCTCGTGGTGCTCAACCTCACC TCCAACGCCTTCTCCGGGAGCATCCCCGGCGGCCTCGGCCGGCTCCGGCGGATGCGGTAC CTCAGCCTCTGCGACAACGCGTTCGCCGGCGAGATACCCGACGCGCTCCGCAACTGCACC GCCCTCGCCGTCGCGTACCTCAACAACAACAACCTCGTCGGCGGCGTCCCACGGTGGCTC GGCGCGCTGCCCAACCTCGCCGTGCTCCGGCTCAGCCACAACTCGCTCTCCGGCCGCATC CCGCCGTCGCTGGCGAACCTGACGAAGATCTTTCGGCTCGAGCTCGACCAGAACCTTCTG GAAGGTTCCATCCCCGACGGCTTGTCGCGCCTCCCGGCGCTCGGCATGTTAGCCTTGTCG CAGAACAGCCTCGCCGGAGAGATCCCGGTGGGGTTCTTCAACATGACGTCGCTGCGTGGC CTCGCGCTCGCCGACAACGCGTTCCGCGGCGAGCTCCCGGGCGACGCGGGCGCGCGCACG CCGAACCTCCAGTACCTCTTCCTCGGCGGCAACCTCCTCGCCGGCCCGATCTCGGCGTCG CTGTCGAACGCCACGGCGCTGGTGGCTCTCAGCCTCGCGAACAACAGCTTCGCCGGGCAG GTGCCCGGCGAGATCGGCACGCTCTGCCCGCTGTCGCTGGAGCTGTCGAACAACCAGCTC ACGGCGACCGACGACGCCGGCGGCGGCTGGGAGTTCATGGACAACCTGACCAACTGCAGC GCCTTGGCCGAGATACTCCTCGACGGCAACAAGTTCGCCGGCGTGATGCCGCCCTCCGTC GTCCGCCTCTCGCCGCAGCTCGAGGCGCTGAACCTTGCCGGCAACCGCATATCCGGCGTA ATACCGCCGGAGATCGAGAGCCTCGTCGGGCTGCAAACGTTGTGCCTCCAGTCCAATCTC TTCTCCGGCGAGATCCCGGAAGCGATCGGCAAGCTCAAGAACCTTCGAGAGCTGCTGCTA GAGCAGAACGAACTGGCCGGGCCGGTGCCATCCGCCATTGGCGACCTCACGCAGCTGCTC AAGCTCGACCTGAGCGGCAACTCGCTGAACGGATCGATTCCTCCCAGCCTTGGCAATCTG CATCAGCTGACACTGCTTAACCTCTCCGGCAACGAGCTCACCGGCCATGTCCCGAGTGAG CTGTTCACCCTCTCGTCGCTGTCGCTGCTGATGGACTTGTCGGACAACCAGCTGGACGGC CCGATCCCTCCCGACGTCGGCCAGCTCACGAAGCTCGCGTTCATGGCGTTGTCGGGGAAC CGCTTCTCCGGCGAGGTGCCGACCGAGCTGGAGAGCTGCCAGAGCTTGGAGTTCCTTGAT TTGGCCCGCAACGTGTTCGTCGGAAGCATCCCGCCATCTCTGAGTGGGCTGAAAGGGCTC AGGAGGCTGAACCTGACGGGCAACAGGTTGTCCGGGAGCATTCCGCCGGAGCTCGGCGGG ATGCCGGGACTGCAAGAGCTGTACCTCTCGCGGAACGACCTGTCCGGCGGCATACCGGCG AGCCTCGAGACCATGAGCTCGCTGATGGAGCTCGACGTGTCCTACAACCGTCTCGCCGGC CAGGTTCCAGTCCACGGCGTGTTCGCGAACACGACCGGGCTGAGGATTGCCGGGAACACC GCGCTCTGCGGCGGCGCGGCGCGGCTACGGTTGCCGCCATGTCCGGCGCCGGGCAACTCC ACACGACGAGCTCATCTCTTCCTCAAGATCGCTCTGCCTGTCGTCGCGGCGGCCCTTTGC TTCGCCGTGATGTTCGCCTTGCTCCGGTGGCGCCGCAAGATCAGGAGTTCGAGAACCGGA AACGCCGCCGCTCGCAGCGTGCTCAACGGCAACTACTACCCGAGGGTCACGTACGCCGAG CTCGCGAAAGCCACCGACGACTTCGCCGACGCCAACCTCGTCGGCGCCGGGAAGTACGGG TCGGTGTACAGGGGGACCCTGTCACTGAAGACGAAGGGGGAGTTCGCGCGCGAGGACGCC GTGGTGGCCGTGAAGGTGCTCGACCTCCGGCAAGTCGGAGCTTCCAAGACGTTCATGGCG GAATGCGAGGCGCTGCGCAGCGTCAAGCACCGGAACCTGATCAACATCGTCACCTGCTGC TCCAGCATCGACATGGAGGGCAACGAGTTCAGAGCTCTGGTGTTCGACTTCATGCCCAAC TACAGCCTCGATAGGTGGCTGCATCGTGCGAAGCATACGGAGACCGGGAAATGGTGCGGC GGTGCCGGCGGCCTGGGCGTGATCCAGAGGCTCGACGTCGCCGTCGACATCGCCGACGCG CTCAACTACCTCCACAACAGCTGCAACCCTCCGATCATCCACTGCGATCTCAAGCCGAGC AACGTTCTCCTCGGCGAGGACATGACGGCCTGCATCGGCGACTTCGGCCTCGCCAAGCTC CTTCTTGATCCGGCCAGCCATGGCGCCGCGGCGGCGAACACCGAGAGCACCATCGGCATA CGCGGCACGATTGGGTACGTCGCGCCGGAGTACGGCACGACGGGGATGGTCACGGCCTCC GGCGACGTGTACAGCTTCGGGATAACCCTCCTCGAGATCTTCTCCGGGAAGGCGCCGACG GACGGCGAGCTCCGCGACGGCCTGACGCTGCCGGAGTTCGTCGCCGGCGCGTTCCCGGAC AACATCGAGGAGATCCTCGACGTGGCCCTGCTGCTGCAGGCCGAGGAGCTCGACGGAGCA GCGTCGTCGACGACGTCGGAGGAGGAGAGCGAGGCGCGCGTCACGGTGCGCGATTGCTTG GCATCCGCCATTAGGGTCGGGCTCAGCTGCTCCCGGCGAGCTCCCTACGAGAGGATGGCC ATGAGCGTCGCCGCCGACGAGATGCGCCTCATCAGAGACGCTTGCCTTCGTGCTTGTGGT AAATAA

Peptide Sequence

PEP ID	Os06t0667000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:27622771:27626271:1 gene:Os06g0667000 transcript:Os06t0667000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0667000-01)
Sequence	MAMPVGVAPVLLLLLLPLAAATAAAESDDRDALMAFKAGVTSDPTGVLRSWNETVHFCRW PGVNCTAGRVTSLDVSMGRLAGELSPAVANLTRLVVLNLTSNAFSGSIPGGLGRLRRMRY LSLCDNAFAGEIPDALRNCTALAVAYLNNNNLVGGVPRWLGALPNLAVLRLSHNSLSGRI PPSLANLTKIFRLELDQNLLEGSIPDGLSRLPALGMLALSQNSLAGEIPVGFFNMTSLRG LALADNAFRGELPGDAGARTPNLQYLFLGGNLLAGPISASLSNATALVALSLANNSFAGQ VPGEIGTLCPLSLELSNNQLTATDDAGGGWEFMDNLTNCSALAEILLDGNKFAGVMPPSV VRLSPQLEALNLAGNRISGVIPPEIESLVGLQTLCLQSNLFSGEIPEAIGKLKNLRELLL EQNELAGPVPSAIGDLTQLLKLDLSGNSLNGSIPPSLGNLHQLTLLNLSGNELTGHVPSE LFTLSSLSLLMDLSDNQLDGPIPPDVGQLTKLAFMALSGNRFSGEVPTELESCQSLEFLD LARNVFVGSIPPSLSGLKGLRRLNLTGNRLSGSIPPELGGMPGLQELYLSRNDLSGGIPA SLETMSSLMELDVSYNRLAGQVPVHGVFANTTGLRIAGNTALCGGAARLRLPPCPAPGNS TRRAHLFLKIALPVVAAALCFAVMFALLRWRRKIRSSRTGNAAARSVLNGNYYPRVTYAE LAKATDDFADANLVGAGKYGSVYRGTLSLKTKGEFAREDAVVAVKVLDLRQVGASKTFMA ECEALRSVKHRNLINIVTCCSSIDMEGNEFRALVFDFMPNYSLDRWLHRAKHTETGKWCG GAGGLGVIQRLDVAVDIADALNYLHNSCNPPIIHCDLKPSNVLLGEDMTACIGDFGLAKL LLDPASHGAAAANTESTIGIRGTIGYVAPEYGTTGMVTASGDVYSFGITLLEIFSGKAPT DGELRDGLTLPEFVAGAFPDNIEEILDVALLLQAEELDGAASSTTSEEESEARVTVRDCL ASAIRVGLSCSRRAPYERMAMSVAADEMRLIRDACLRACGK

Transcript Sequence

Transcript ID	Os06t0667000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:27622771:27626271:1 gene:Os06g0667000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0667000-01)
Sequence	GCATACTGAAGAAGATAAAAAAAAAAGTTCGATAGATTCATCGCTCATACTAGCAAGCAT GGCAATGCCAGTTGGAGTTGCACCGGTGTTGTTACTGTTGCTTTTGCCATTGGCGGCGGC GACGGCGGCGGCGGAGAGTGACGACAGGGACGCGCTGATGGCGTTCAAGGCCGGCGTGAC GTCGGACCCGACCGGCGTGCTCCGGTCGTGGAACGAGACGGTGCACTTCTGCCGGTGGCC GGGGGTGAACTGCACGGCGGGGCGCGTCACGTCGCTGGACGTGTCCATGGGCCGCCTCGC CGGCGAGCTCTCGCCGGCCGTCGCCAACCTCACGCGGCTCGTGGTGCTCAACCTCACCTC CAACGCCTTCTCCGGGAGCATCCCCGGCGGCCTCGGCCGGCTCCGGCGGATGCGGTACCT CAGCCTCTGCGACAACGCGTTCGCCGGCGAGATACCCGACGCGCTCCGCAACTGCACCGC CCTCGCCGTCGCGTACCTCAACAACAACAACCTCGTCGGCGGCGTCCCACGGTGGCTCGG CGCGCTGCCCAACCTCGCCGTGCTCCGGCTCAGCCACAACTCGCTCTCCGGCCGCATCCC GCCGTCGCTGGCGAACCTGACGAAGATCTTTCGGCTCGAGCTCGACCAGAACCTTCTGGA AGGTTCCATCCCCGACGGCTTGTCGCGCCTCCCGGCGCTCGGCATGTTAGCCTTGTCGCA GAACAGCCTCGCCGGAGAGATCCCGGTGGGGTTCTTCAACATGACGTCGCTGCGTGGCCT CGCGCTCGCCGACAACGCGTTCCGCGGCGAGCTCCCGGGCGACGCGGGCGCGCGCACGCC GAACCTCCAGTACCTCTTCCTCGGCGGCAACCTCCTCGCCGGCCCGATCTCGGCGTCGCT GTCGAACGCCACGGCGCTGGTGGCTCTCAGCCTCGCGAACAACAGCTTCGCCGGGCAGGT GCCCGGCGAGATCGGCACGCTCTGCCCGCTGTCGCTGGAGCTGTCGAACAACCAGCTCAC GGCGACCGACGACGCCGGCGGCGGCTGGGAGTTCATGGACAACCTGACCAACTGCAGCGC CTTGGCCGAGATACTCCTCGACGGCAACAAGTTCGCCGGCGTGATGCCGCCCTCCGTCGT CCGCCTCTCGCCGCAGCTCGAGGCGCTGAACCTTGCCGGCAACCGCATATCCGGCGTAAT ACCGCCGGAGATCGAGAGCCTCGTCGGGCTGCAAACGTTGTGCCTCCAGTCCAATCTCTT CTCCGGCGAGATCCCGGAAGCGATCGGCAAGCTCAAGAACCTTCGAGAGCTGCTGCTAGA GCAGAACGAACTGGCCGGGCCGGTGCCATCCGCCATTGGCGACCTCACGCAGCTGCTCAA GCTCGACCTGAGCGGCAACTCGCTGAACGGATCGATTCCTCCCAGCCTTGGCAATCTGCA TCAGCTGACACTGCTTAACCTCTCCGGCAACGAGCTCACCGGCCATGTCCCGAGTGAGCT GTTCACCCTCTCGTCGCTGTCGCTGCTGATGGACTTGTCGGACAACCAGCTGGACGGCCC GATCCCTCCCGACGTCGGCCAGCTCACGAAGCTCGCGTTCATGGCGTTGTCGGGGAACCG CTTCTCCGGCGAGGTGCCGACCGAGCTGGAGAGCTGCCAGAGCTTGGAGTTCCTTGATTT GGCCCGCAACGTGTTCGTCGGAAGCATCCCGCCATCTCTGAGTGGGCTGAAAGGGCTCAG GAGGCTGAACCTGACGGGCAACAGGTTGTCCGGGAGCATTCCGCCGGAGCTCGGCGGGAT GCCGGGACTGCAAGAGCTGTACCTCTCGCGGAACGACCTGTCCGGCGGCATACCGGCGAG CCTCGAGACCATGAGCTCGCTGATGGAGCTCGACGTGTCCTACAACCGTCTCGCCGGCCA GGTTCCAGTCCACGGCGTGTTCGCGAACACGACCGGGCTGAGGATTGCCGGGAACACCGC GCTCTGCGGCGGCGCGGCGCGGCTACGGTTGCCGCCATGTCCGGCGCCGGGCAACTCCAC ACGACGAGCTCATCTCTTCCTCAAGATCGCTCTGCCTGTCGTCGCGGCGGCCCTTTGCTT CGCCGTGATGTTCGCCTTGCTCCGGTGGCGCCGCAAGATCAGGAGTTCGAGAACCGGAAA CGCCGCCGCTCGCAGCGTGCTCAACGGCAACTACTACCCGAGGGTCACGTACGCCGAGCT CGCGAAAGCCACCGACGACTTCGCCGACGCCAACCTCGTCGGCGCCGGGAAGTACGGGTC GGTGTACAGGGGGACCCTGTCACTGAAGACGAAGGGGGAGTTCGCGCGCGAGGACGCCGT GGTGGCCGTGAAGGTGCTCGACCTCCGGCAAGTCGGAGCTTCCAAGACGTTCATGGCGGA ATGCGAGGCGCTGCGCAGCGTCAAGCACCGGAACCTGATCAACATCGTCACCTGCTGCTC CAGCATCGACATGGAGGGCAACGAGTTCAGAGCTCTGGTGTTCGACTTCATGCCCAACTA CAGCCTCGATAGGTGGCTGCATCGTGCGAAGCATACGGAGACCGGGAAATGGTGCGGCGG TGCCGGCGGCCTGGGCGTGATCCAGAGGCTCGACGTCGCCGTCGACATCGCCGACGCGCT CAACTACCTCCACAACAGCTGCAACCCTCCGATCATCCACTGCGATCTCAAGCCGAGCAA CGTTCTCCTCGGCGAGGACATGACGGCCTGCATCGGCGACTTCGGCCTCGCCAAGCTCCT TCTTGATCCGGCCAGCCATGGCGCCGCGGCGGCGAACACCGAGAGCACCATCGGCATACG CGGCACGATTGGGTACGTCGCGCCGGAGTACGGCACGACGGGGATGGTCACGGCCTCCGG CGACGTGTACAGCTTCGGGATAACCCTCCTCGAGATCTTCTCCGGGAAGGCGCCGACGGA CGGCGAGCTCCGCGACGGCCTGACGCTGCCGGAGTTCGTCGCCGGCGCGTTCCCGGACAA CATCGAGGAGATCCTCGACGTGGCCCTGCTGCTGCAGGCCGAGGAGCTCGACGGAGCAGC GTCGTCGACGACGTCGGAGGAGGAGAGCGAGGCGCGCGTCACGGTGCGCGATTGCTTGGC ATCCGCCATTAGGGTCGGGCTCAGCTGCTCCCGGCGAGCTCCCTACGAGAGGATGGCCAT GAGCGTCGCCGCCGACGAGATGCGCCTCATCAGAGACGCTTGCCTTCGTGCTTGTGGTAA ATAAGTAGGACAGTATACTGATTATTTGTAGAACTTTGACAGCCGAATTAGTCGATGGAT AATTATTACTACGTCATCGGCATCGAATTCTATCACTATTCGAGGCTTCGAGCAAGCTGT TGTGGAGTAAAAAAAATGAAAATGTAAAATCCATGGAATTCAGGAGCTCTGATCTCTTGA TTTATCTAGTGTACTGTACTGACAGAAAATGGATGTACTCTGCATATTCAGATTTCAGAA TAGATTGTTCTGTTTATGTCC