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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0666500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:27598569:27599476:1 gene:Os06g0666500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0666500-00)
Sequence

ATGGAGGTGTCCCACATGGCCAACTGCAGCAACGTCTCCTCACCGGAGCAGCAGCCGATG
CCGCCGTCTTCGGCAGCGGCGTCGTCGCCGTCGCCGCCGCAGCTTGACTACGACGTGGTG
GTGATCCTGGCGGCGATGCTGTGCGCGCTGGTGTGCGCGCTGGGGCTCAACTCGATGCTC
CAGTGCGTGGTGCGGTGCACCCGGCGCGCCGTGGCGGACCCCGTCGGCTGGGTGGAGCAC
CGCCGCGCCGGCGCGGGGCTCAAGCGCGAGGACGTCGTGGCGCTGCCCGTCGCCACGTAC
GTCGCCTCGCCGGCGCCCTCCGTCGCCGGCTGCGCCATCTGCCTGTCGGACTTCGCCGAC
GGGGAGAGGGTCCGGCTGCTCCCGGCGTGCGGCCACCGGTTCCACGTCGTGTGCATCGAC
AGGTGGCTCCTGGCGCACTGCTCCTGCCCGACGTGCCGCCGCCGCCCCTCGCCAGAGGCC
GACGGCCACGGCGCCGTCGTCGGAGAAGACCACCACCATCGCCTGCAAGTTTTGACTGCT
GCTTAA

Peptide Sequence

PEP ID

Os06t0666500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:27598569:27599476:1 gene:Os06g0666500 transcript:Os06t0666500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0666500-00)
Sequence

MEVSHMANCSNVSSPEQQPMPPSSAAASSPSPPQLDYDVVVILAAMLCALVCALGLNSML
QCVVRCTRRAVADPVGWVEHRRAGAGLKREDVVALPVATYVASPAPSVAGCAICLSDFAD
GERVRLLPACGHRFHVVCIDRWLLAHCSCPTCRRRPSPEADGHGAVVGEDHHHRLQVLTA
A

Transcript Sequence

Transcript ID

Os06t0666500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27598569:27599476:1 gene:Os06g0666500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0666500-00)
Sequence

ACTAAAATTTGTTTCGATCACTTTGCTTACTGCTATAGCTCTAGCTCTTCAGTTGTCACC
TTTTGTTTTCTCCTTGTCTTTCTCTGCGATGTCGTGGTTGCTCCACTCTCTTCTCCTCTT
CTCCTTGCCTGTCTGATCGATCGCCTCGCCACCGCCGCCGCCACCGCCGCCGTCGTCGTC
GTCGTCGTCGTATCGGCATGGAGGTGTCCCACATGGCCAACTGCAGCAACGTCTCCTCAC
CGGAGCAGCAGCCGATGCCGCCGTCTTCGGCAGCGGCGTCGTCGCCGTCGCCGCCGCAGC
TTGACTACGACGTGGTGGTGATCCTGGCGGCGATGCTGTGCGCGCTGGTGTGCGCGCTGG
GGCTCAACTCGATGCTCCAGTGCGTGGTGCGGTGCACCCGGCGCGCCGTGGCGGACCCCG
TCGGCTGGGTGGAGCACCGCCGCGCCGGCGCGGGGCTCAAGCGCGAGGACGTCGTGGCGC
TGCCCGTCGCCACGTACGTCGCCTCGCCGGCGCCCTCCGTCGCCGGCTGCGCCATCTGCC
TGTCGGACTTCGCCGACGGGGAGAGGGTCCGGCTGCTCCCGGCGTGCGGCCACCGGTTCC
ACGTCGTGTGCATCGACAGGTGGCTCCTGGCGCACTGCTCCTGCCCGACGTGCCGCCGCC
GCCCCTCGCCAGAGGCCGACGGCCACGGCGCCGTCGTCGGAGAAGACCACCACCATCGCC
TGCAAGTTTTGACTGCTGCTTAATTGATCGGCTAAACTTTTTTTACTATAGATTATGAGC
GTGACCTATATATGCTCATTATCCGGTAAATAACTTGTATAATGGCTGATGATTTTACTT
CGCCATCTTGAGTGAGTAGTTATTATTTTCGTCTATCCAGGAAAATCATCCTGAATGACA
GTTGCTTT