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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0665900-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:27530111:27532493:1 gene:Os06g0665900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to thioredoxin domain-containing protein 2. (Os06t0665900-00)
Sequence

ATGGCTCTGGCTCACCGACTCTGCCGTCTTCCTCGCCTCCTCCCCCTCGCCGCCGCCGCC
GCCGCCTCCAAACCCTACCTCCCCGGAAAACCTAGCCCCGCGCCTCCTCCTCCCCTCTCC
TCCCCGCCGCCGTTTCCCTCTCTCTCCCGCCTCTTCTCCACCACCCCCTCCTCCTCAGGT
GATTCCAGCATGGTGGTGGTCGGATCGGCGGAGTCCTTCACCAGCATCATGTCCAAGGTG
GAAGCGGAGAAGCTTCCGGCCGTGTTCTACTACACGGCGGTATGGTGCGGGCCTTGTAGA
GCGATGGCACCCGTGATTTCAAAACTGAGCAGCCGGTACCCCAAGATACCTATCTACAAA
GTTGACATTGACATGGATGGTGTTGGAAGCAAACTAAGTGATCTAAAAATATTCTCTGTG
CCAACATTCCATTTCTACTACCAAGGTCGGAAGACAGGTGAGGTGGTTGGTGCTAATGCG
ACAAAACTTGAATCAACCATGGAAAGTCTTCACAAGCAACTATAG

Peptide Sequence

PEP ID

Os06t0665900-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:27530111:27532493:1 gene:Os06g0665900 transcript:Os06t0665900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to thioredoxin domain-containing protein 2. (Os06t0665900-00)
Sequence

MALAHRLCRLPRLLPLAAAAAASKPYLPGKPSPAPPPPLSSPPPFPSLSRLFSTTPSSSG
DSSMVVVGSAESFTSIMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRYPKIPIYK
VDIDMDGVGSKLSDLKIFSVPTFHFYYQGRKTGEVVGANATKLESTMESLHKQL

Transcript Sequence

Transcript ID

Os06t0665900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27530111:27532493:1 gene:Os06g0665900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to thioredoxin domain-containing protein 2. (Os06t0665900-00)
Sequence

CGGCGACGTGGCACAGTATGGCTCTGGCTCACCGACTCTGCCGTCTTCCTCGCCTCCTCC
CCCTCGCCGCCGCCGCCGCCGCCTCCAAACCCTACCTCCCCGGAAAACCTAGCCCCGCGC
CTCCTCCTCCCCTCTCCTCCCCGCCGCCGTTTCCCTCTCTCTCCCGCCTCTTCTCCACCA
CCCCCTCCTCCTCAGGTGATTCCAGCATGGTGGTGGTCGGATCGGCGGAGTCCTTCACCA
GCATCATGTCCAAGGTGGAAGCGGAGAAGCTTCCGGCCGTGTTCTACTACACGGCGGTAT
GGTGCGGGCCTTGTAGAGCGATGGCACCCGTGATTTCAAAACTGAGCAGCCGGTACCCCA
AGATACCTATCTACAAAGTTGACATTGACATGGATGGTGTTGGAAGCAAACTAAGTGATC
TAAAAATATTCTCTGTGCCAACATTCCATTTCTACTACCAAGGTCGGAAGACAGGTGAGG
TGGTTGGTGCTAATGCGACAAAACTTGAATCAACCATGGAAAGTCTTCACAAGCAACTAT
AGAAGTTTTGTGGAAGAATATGACCGGGAGGTGGCCAGATGTCTCCATGTGCCTTCCATC
AACGTGTTTGACATTGATATTTCTGAACCTTCTGGTTGTTTTTTATCATGCTGAATTCAG
TACATTGCACCTCTTGTTTATTTAGCACAACTTTGTATAGTCTGCATGTCTAATATCAGA
ATCAACGCAAACATTCTGTTGGGATGCAGC