Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0663500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:27387616:27391161:-1 gene:Os06g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 11 description:SBP domain containing protein. (Os06t0663500-00)
Sequence

ATGGAGTGCAACCCCGTCTCCTCCACCACCTCCTCCTCCCTGCTCTGGGACTGGGACGCC
ACCGCCTCCGCCGAGCCGCCGCCGCCGCCCGGGAAGCGCGGCGGGAGGGATTCGTCGTCG
GCGTCGGCGTCGGCGAAGCGTGGGAGGTCGGCGGCAGCAGCGGGGGATGCGGCGGCGGTG
GCGGCGGAGGCGCCGCGGTGCCAGGTGGAGGGCTGCGGGCTGGAGCTGGGAGGCTACAAG
GAGTACTACCGCAAGCACCGCGTCTGCGAGCCCCACACCAAGTGCCTCCGCGTCGTCGTC
GCCGGCCAGGACCGCCGCTTCTGCCAGCAGTGCAGCAGGTTCCACGCGCCTTCGGAGTTT
GATCAGGAGAAACGGAGCTGCCGGAGACGACTTTCTGATCATAATGCCCGTCGACGGAAA
CCACAGACAGATGTGTTTGCTTTTGGCTCTGGAACACTACCGCGATCACTGTTTGATGAT
AGGCAGCAAATAAGTTTCGCATGGGATAATAACGCTCCACTTAACCATGCAAACACCACT
TCAAGTTCCTCGTGGACATCTGACTTACAGCTCTCCCAAGTGATGGACATAAGCAAAAGG
TCACGAAAAGCTGGGGCAGACAGTGCAAATATCCGTTTGTCAAATGCTTTGCCAACTCTT
TGTCATGACACAAATGAGCTCTTGCCAATAAAAGGTGCAGATGCATCTGAAACTGCTTCA
AAACTAGATGGAGCACTAGATGTTCAGCGTGCTCTCTCTCTTCTGTCAGCTAGTTCAAGG
GGTTTGACTGACCCCGGACACCAAACATCTTCTATCATCCAATTTACGAATTCGAACCAA
AACAGCACATTGCCCAGTGTACCAAGCGAAGGAAACTCTAATGTACCCTTTTGGGTTGAT
GGACAACATCAAGCAGTAGAGCCTCAGGTGTTTCAGTTCACAATGGACACCGGTAACACT
GTGTTTCCGGATCTAGAGCGGATCAAACCTTCCTACGAGTCTTCAATGTTTGGTCTGAAC
CAGATACATTGA

Peptide Sequence

PEP ID

Os06t0663500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:27387616:27391161:-1 gene:Os06g0663500 transcript:Os06t0663500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 11 description:SBP domain containing protein. (Os06t0663500-00)
Sequence

MECNPVSSTTSSSLLWDWDATASAEPPPPPGKRGGRDSSSASASAKRGRSAAAAGDAAAV
AAEAPRCQVEGCGLELGGYKEYYRKHRVCEPHTKCLRVVVAGQDRRFCQQCSRFHAPSEF
DQEKRSCRRRLSDHNARRRKPQTDVFAFGSGTLPRSLFDDRQQISFAWDNNAPLNHANTT
SSSSWTSDLQLSQVMDISKRSRKAGADSANIRLSNALPTLCHDTNELLPIKGADASETAS
KLDGALDVQRALSLLSASSRGLTDPGHQTSSIIQFTNSNQNSTLPSVPSEGNSNVPFWVD
GQHQAVEPQVFQFTMDTGNTVFPDLERIKPSYESSMFGLNQIH

Transcript Sequence

Transcript ID

Os06t0663500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27387616:27391161:-1 gene:Os06g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 11 description:SBP domain containing protein. (Os06t0663500-00)
Sequence

ATGGAGTGCAACCCCGTCTCCTCCACCACCTCCTCCTCCCTGCTCTGGGACTGGGACGCC
ACCGCCTCCGCCGAGCCGCCGCCGCCGCCCGGGAAGCGCGGCGGGAGGGATTCGTCGTCG
GCGTCGGCGTCGGCGAAGCGTGGGAGGTCGGCGGCAGCAGCGGGGGATGCGGCGGCGGTG
GCGGCGGAGGCGCCGCGGTGCCAGGTGGAGGGCTGCGGGCTGGAGCTGGGAGGCTACAAG
GAGTACTACCGCAAGCACCGCGTCTGCGAGCCCCACACCAAGTGCCTCCGCGTCGTCGTC
GCCGGCCAGGACCGCCGCTTCTGCCAGCAGTGCAGCAGGTTCCACGCGCCTTCGGAGTTT
GATCAGGAGAAACGGAGCTGCCGGAGACGACTTTCTGATCATAATGCCCGTCGACGGAAA
CCACAGACAGATGTGTTTGCTTTTGGCTCTGGAACACTACCGCGATCACTGTTTGATGAT
AGGCAGCAAATAAGTTTCGCATGGGATAATAACGCTCCACTTAACCATGCAAACACCACT
TCAAGTTCCTCGTGGACATCTGACTTACAGCTCTCCCAAGTGATGGACATAAGCAAAAGG
TCACGAAAAGCTGGGGCAGACAGTGCAAATATCCGTTTGTCAAATGCTTTGCCAACTCTT
TGTCATGACACAAATGAGCTCTTGCCAATAAAAGGTGCAGATGCATCTGAAACTGCTTCA
AAACTAGATGGAGCACTAGATGTTCAGCGTGCTCTCTCTCTTCTGTCAGCTAGTTCAAGG
GGTTTGACTGACCCCGGACACCAAACATCTTCTATCATCCAATTTACGAATTCGAACCAA
AACAGCACATTGCCCAGTGTACCAAGCGAAGGAAACTCTAATGTACCCTTTTGGGTTGAT
GGACAACATCAAGCAGTAGAGCCTCAGGTGTTTCAGTTCACAATGGACACCGGTAACACT
GTGTTTCCGGATCTAGAGCGGATCAAACCTTCCTACGAGTCTTCAATGTTTGGTCTGAAC
CAGATACATTGAAGCCTGCAATGATCACCAGCACGGTCGCTGCTAGTATGGATGAATAAG
CACACGTCCTGGACTATCCAAGATCGTCCAAGACTTGCCCCAATCTGCCGAGTGTCAATG
CTATATCCGTGTGTTTATTTACCTTCCCATAATTCAGATAAACCTTGTGAACGCCAACAT
CTAAGTATCAAGCGTTCACAAAGTGTGCTAGTTTCAACCTTATTTCTGTCAAAATGTAAT
TGCTGTTGTGCAATTCTTTGTTCTTCGTGTTGTACAA