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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0662200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:27299932:27302104:-1 gene:Os06g0662200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SEED B-ZIPPER 5 description:Basic leucine zipper (bZIP) transcription factor, Negative regulator of cold and drought stress response (Os06t0662200-01)
Sequence

ATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATCCGGGAGGAGGCCGGC
GCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCGCGTAAGTCCGGCCTG
TTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACACTGGACGGAAGCGGC
GGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCGCGCGCCGCCGCCGCC
TTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGATGACCCCAAACCAACC
ACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGCGATTCGCTGTTAGAA
GCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACAAAGCGAATAAGAAGG
ATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAGCAGGCACAGTTATCT
GAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCCCTCTTCAAGCAGCTC
ACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGGATCCTCAAATCGGAT
GTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTCGCGAGGGCCGCGATG
TCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCCAGGAAGATGTGCCAA
GCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTCAAAGGCTTGAACCTG
GGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTAGAGAGCCTGGACAAC
CGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCTTAA

Peptide Sequence

PEP ID

Os06t0662200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:27299932:27302104:-1 gene:Os06g0662200 transcript:Os06t0662200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SEED B-ZIPPER 5 description:Basic leucine zipper (bZIP) transcription factor, Negative regulator of cold and drought stress response (Os06t0662200-01)
Sequence

MMKKCPSELQLEAFIREEAGAGDRKPGVLSPGDGARKSGLFSPGDGEMSVLDQSTLDGSG
GGHQLWWPESVRTPPRAAAAFSATADERTPASISDDPKPTTSANHAPESDSDSDCDSLLE
AERSPRLRGTKSTETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQL
TESSQQFNTAVTDNRILKSDVEALRVKVKMAEDMVARAAMSCGLGQLGLAPLLSSRKMCQ
ALDMLSLPRNDACGFKGLNLGRQVQNSPVQSAASLESLDNRISSEVTSCSADVWP

Transcript Sequence

Transcript ID

Os06t0662200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27299932:27302104:-1 gene:Os06g0662200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SEED B-ZIPPER 5 description:Basic leucine zipper (bZIP) transcription factor, Negative regulator of cold and drought stress response (Os06t0662200-01)
Sequence

GGTCGGAGGAAGGCGATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATC
CGGGAGGAGGCCGGCGCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCG
CGTAAGTCCGGCCTGTTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACA
CTGGACGGAAGCGGCGGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCG
CGCGCCGCCGCCGCCTTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGAT
GACCCCAAACCAACCACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGC
GATTCGCTGTTAGAAGCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACA
AAGCGAATAAGAAGGATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAG
CAGGCACAGTTATCTGAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCC
CTCTTCAAGCAGCTCACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGG
ATCCTCAAATCGGATGTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTC
GCGAGGGCCGCGATGTCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCC
AGGAAGATGTGCCAAGCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTC
AAAGGCTTGAACCTGGGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTA
GAGAGCCTGGACAACCGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCT
TAAGACACTTCATCCGTGTTCGAGAGAGCTTGAGATTCTAAGAAGCAGCCGGTGAGAATC
TGAAAAGGCTAGTTGTTCAGTTTCCTATTTTTAGTTTATGTTTGAATTCTCTGGCTACTA
ATGCTCAAAATCTGGGAGAGAATCTAAATCGTTTGGGACAGATAAAAAATTATGCGAGAA
GGTGTAGCTGACAGAAACCTTCCCAAACAAATCTCCATCAGAACCTATATGTAAAGTAAT
ACGGTATCCTCTGTTACTAGGTGCATGTGCATAACTGACAAGCTGCTAAGTACTAGGTAC
TACAGTCTGAGGCAAGTATTTCTGGTGTTTTGGTGCTGAAGAACTATGTTTTAGTGCGTT
TGATCTGCGGCAATCAAGGCCATCTGATCGAAATTTGATTGGTATAAATCTGATCGAAAT
TTGATTGGTATAAGTATAATAGTTTGATTTTGATCACCTCTAGTCGTCAGCGCCTTTGGT
GTATACGCTCTGTAACATCTGTTACGAATTGATCTGTTCAGTATACTTCAACAGTCCTGC
ATTGGTTCAGTTCTTGGCGTAGCTCTGGTGCTTCTGGTGCGCATAGCATCGGTGTGAAAT
GTGCCACTTTTCATGGCAGTTGTAATAGTAAACGACTGCAAAATTACGGTGTACTATAAT
TCCTAAACAAATATGTGACAATTACGATGAAAATTATCACT