Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0662000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:27286319:27292847:-1 gene:Os06g0662000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE LEAF SENESCENCE 1 description:Vacuolar-type H+-ATPase subunit A1, Premature leaf senescence and seed dormancy, Regulation of stomatal aperture and density (Os06t0662000-01)
Sequence	ATGTCGTACGATCGCGTCACGACCTTCGAGGACTCGGAGAAGGAGAGCGAGTACGGCTAC GTCCGCAAGGTTTCTGGACCTGTGGTCGTGGCTGATGGAATGGGTGGTGCTGCCATGTAT GAACTTGTCCGAGTTGGTAATGATAACCTCATTGGGGAAATTATTCGTCTTGAGGGTGAT TCAGCCACCATTCAAGTTTATGAGGAAACAGCTGGGTTGATGGTCAATGATCCAGTGTTG AGAACAAGAAAGCCTCTTTCAGTTGAATTGGGACCTGGTATCCTTGGAAATATCTTTGAT GGAATCCAGCGCCCTCTAAAAACTATTGCTATAAAGTCTGGAGATGTGTACATACCACGT GGTGTTTCAGTCCCTGCTCTTGACAAAGATCAGTTGTGGGATTTTGAGCCAAAGAAGCTA GGTGTTGGAGATGCCATCACTGGTGGAGATCTATATGCTACTGTGTTTGAGAATACGCTG ATGAAACATCATGTTGCCCTTCCTCCTGGTTCTATGGGGAAAATTAGTTACATTGCACCA GCTGGCCAGTATAGCTTGCAGGATACAGTTCTGGAACTGGAATTCCAGGGCATCAAAAAG CAATTTACTATGCTCCAGACATGGCCTGTCCGGTCACCAAGGCCTGTTTCATCAAAGCTT GCTGCTGACACGCCTCTTCTAACAGGACAGCGTGTACTTGATGCACTATTTCCCTCAGTT CTTGGAGGAACTTGTGCTATTCCTGGAGCATTTGGTTGTGGAAAAACTGTCATTAGTCAG GCACTTTCAAAGTACTCCAATTCTGAAGCTGTGGTTTATGTGGGCTGCGGGGAAAGAGGA AACGAGATGGCTGAGGTCCTTATGGACTTCCCACAATTGACAATGACATTGCCTGATGGA CGTGAAGAGTCTGTCATGAAAAGAACTACACTTGTTGCTAACACATCCAACATGCCTGTT GCTGCTCGTGAAGCCTCCATTTATACAGGAATTACAATTGCTGAATACTTCCGTGACATG GGCTATAATGTCAGTATGATGGCTGATTCTACTTCTCGGTGGGCTGAAGCTTTGCGTGAG ATTTCAGGACGTCTGGCTGAAATGCCTGCGGATAGTGGTTACCCTGCATATTTGGCTGCA CGTTTGGCATCCTTTTACGAACGTGCTGGTAAGGTGAAATGTCTCGGCAGTCCAGATCGG ACAGGCAGTGTCACAATTGTTGGTGCTGTCTCTCCACCTGGAGGTGATTTTTCAGATCCT GTTACCTCTGCAACTCTTAGTATTGTGCAGGTCTTTTGGGGATTGGATAAGAAGCTGGCT CAAAGAAAGCATTTCCCATCTGTCAATTGGCTCATCTCTTACTCAAAATACTCAAAGGCT CTGGAATCCTTCTATGAGAAGTTTGATCAAGATTTCATTGATATTAGAACAAAAGCTCGT GAAGTGTTACAGAGAGAGGACGATCTAAATGAAATTGTCCAGCTTGTTGGTAAAGATGCA CTGGCAGAATCTGATAAGATTACATTGGAAACAGCCAAGCTACTAAGGGAAGATTACTTG GCACAGAATGCATTTACCCCATATGACAAGTTCTGTCCATTCTACAAGTCTGTTTGGATG ATGCGCAACATTATTCATTTCAATACATTAGCAAATCAGGCTGTGGAGCGTGCAGCTAAT GCTGATGGACAAAAAATAACATACAGTGTCATAAAGCATCGTATGGGTGATCTATTTTAT CGCCTAGTATCTCAAAAGTTTGAGGACCCTGCAGAGGGTGAAGATGTCCTAGTCGCAAAA TTCCAGAAATTGTATGATGACCTCACAACCGGATTCCGCAACCTAGAAGATGAAGCTAGG TGA

Peptide Sequence

PEP ID	Os06t0662000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:27286319:27292847:-1 gene:Os06g0662000 transcript:Os06t0662000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE LEAF SENESCENCE 1 description:Vacuolar-type H+-ATPase subunit A1, Premature leaf senescence and seed dormancy, Regulation of stomatal aperture and density (Os06t0662000-01)
Sequence	MSYDRVTTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGD SATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPR GVSVPALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAP AGQYSLQDTVLELEFQGIKKQFTMLQTWPVRSPRPVSSKLAADTPLLTGQRVLDALFPSV LGGTCAIPGAFGCGKTVISQALSKYSNSEAVVYVGCGERGNEMAEVLMDFPQLTMTLPDG REESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALRE ISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGGDFSDP VTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDQDFIDIRTKAR EVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWM MRNIIHFNTLANQAVERAANADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGEDVLVAK FQKLYDDLTTGFRNLEDEAR

Transcript Sequence

Transcript ID	Os06t0662000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:27286319:27292847:-1 gene:Os06g0662000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE LEAF SENESCENCE 1 description:Vacuolar-type H+-ATPase subunit A1, Premature leaf senescence and seed dormancy, Regulation of stomatal aperture and density (Os06t0662000-01)
Sequence	CGTCTTCCATTCCAGCCCAGATCGAGCGAGAGAGCCGTCTCCCTCTTCGCTTCTCCTCTC CCCCCCGTGATCTGACCGCCGGCGACGACCCCCTCCCACCACCCGCCGCCGCCGCCGCGC CCCCGCCCCCGCCGGCGACGACCACCATGTCGTACGATCGCGTCACGACCTTCGAGGACT CGGAGAAGGAGAGCGAGTACGGCTACGTCCGCAAGGTTTCTGGACCTGTGGTCGTGGCTG ATGGAATGGGTGGTGCTGCCATGTATGAACTTGTCCGAGTTGGTAATGATAACCTCATTG GGGAAATTATTCGTCTTGAGGGTGATTCAGCCACCATTCAAGTTTATGAGGAAACAGCTG GGTTGATGGTCAATGATCCAGTGTTGAGAACAAGAAAGCCTCTTTCAGTTGAATTGGGAC CTGGTATCCTTGGAAATATCTTTGATGGAATCCAGCGCCCTCTAAAAACTATTGCTATAA AGTCTGGAGATGTGTACATACCACGTGGTGTTTCAGTCCCTGCTCTTGACAAAGATCAGT TGTGGGATTTTGAGCCAAAGAAGCTAGGTGTTGGAGATGCCATCACTGGTGGAGATCTAT ATGCTACTGTGTTTGAGAATACGCTGATGAAACATCATGTTGCCCTTCCTCCTGGTTCTA TGGGGAAAATTAGTTACATTGCACCAGCTGGCCAGTATAGCTTGCAGGATACAGTTCTGG AACTGGAATTCCAGGGCATCAAAAAGCAATTTACTATGCTCCAGACATGGCCTGTCCGGT CACCAAGGCCTGTTTCATCAAAGCTTGCTGCTGACACGCCTCTTCTAACAGGACAGCGTG TACTTGATGCACTATTTCCCTCAGTTCTTGGAGGAACTTGTGCTATTCCTGGAGCATTTG GTTGTGGAAAAACTGTCATTAGTCAGGCACTTTCAAAGTACTCCAATTCTGAAGCTGTGG TTTATGTGGGCTGCGGGGAAAGAGGAAACGAGATGGCTGAGGTCCTTATGGACTTCCCAC AATTGACAATGACATTGCCTGATGGACGTGAAGAGTCTGTCATGAAAAGAACTACACTTG TTGCTAACACATCCAACATGCCTGTTGCTGCTCGTGAAGCCTCCATTTATACAGGAATTA CAATTGCTGAATACTTCCGTGACATGGGCTATAATGTCAGTATGATGGCTGATTCTACTT CTCGGTGGGCTGAAGCTTTGCGTGAGATTTCAGGACGTCTGGCTGAAATGCCTGCGGATA GTGGTTACCCTGCATATTTGGCTGCACGTTTGGCATCCTTTTACGAACGTGCTGGTAAGG TGAAATGTCTCGGCAGTCCAGATCGGACAGGCAGTGTCACAATTGTTGGTGCTGTCTCTC CACCTGGAGGTGATTTTTCAGATCCTGTTACCTCTGCAACTCTTAGTATTGTGCAGGTCT TTTGGGGATTGGATAAGAAGCTGGCTCAAAGAAAGCATTTCCCATCTGTCAATTGGCTCA TCTCTTACTCAAAATACTCAAAGGCTCTGGAATCCTTCTATGAGAAGTTTGATCAAGATT TCATTGATATTAGAACAAAAGCTCGTGAAGTGTTACAGAGAGAGGACGATCTAAATGAAA TTGTCCAGCTTGTTGGTAAAGATGCACTGGCAGAATCTGATAAGATTACATTGGAAACAG CCAAGCTACTAAGGGAAGATTACTTGGCACAGAATGCATTTACCCCATATGACAAGTTCT GTCCATTCTACAAGTCTGTTTGGATGATGCGCAACATTATTCATTTCAATACATTAGCAA ATCAGGCTGTGGAGCGTGCAGCTAATGCTGATGGACAAAAAATAACATACAGTGTCATAA AGCATCGTATGGGTGATCTATTTTATCGCCTAGTATCTCAAAAGTTTGAGGACCCTGCAG AGGGTGAAGATGTCCTAGTCGCAAAATTCCAGAAATTGTATGATGACCTCACAACCGGAT TCCGCAACCTAGAAGATGAAGCTAGGTGAAGTGCTGTAAATTGAGGATCACATTCGTGTA AACAATAAAATATCACCAGATATTCGAAGCGAGTTGGGGCAATTTATTTTGCTTCGCGTG AGGTTGTAGATGTGAATTACGTTTCAGAATCATCATATTTTCCTTCTGCATCGACACTGC TGCTGCTTTTTGTAGCTTCCTGTTTGACCTCCGGTGCTCGATGAAGGCATTCTTTTTGGT GTACAATTATTTATATTGTAAGATACCTGTGCACATGTTGATAGTTGAATAAGCACGATG ACCATCTACTTGAACATCATATATTTTTCTCCC