Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0661700-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:27265304:27269890:-1 gene:Os06g0661700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0661700-01);RabGAP/TBC domain containing protein. (Os06t0661700-02)
Sequence	ATGCCGGAGTGTCCAGCGAGGGAGCGGTTCTCCGCGCTCCGCGGCGCCCGGTGGCGCGCC GATCTCGGCGTCCTCCCCGACTGCGCCTCCGTGTCCACCGAGGAGTTCCGCCGAGCCGCC GCCGACTCCCGCCGCAGGTATGCTAATTTGCGGCGGCGGCTGTTAATAGATCCCCATCTC TCTAAGGATGAAGAAAACGCTCCTGACCTTGCTGTGGAAAATCCACTATCACAGAACCCA GAAAGCACTTGGGGCCAATATTTCAGAAATGCAGAACTAGAGAAAATGTTGAACCAAGAT TTGTCTCGGCTCTACCCTGAATTGGGAAATTTCTTCCAAACAACCATATGTCAGTCCATG CTTGGACGTATACTGTTAGTTTGGAGCCTTAGGTACCCAGAGCTCGGTTACAAACAAGGA ATGCATGAGCTCTTAGCTCCTCTTCTCTATGTCCTCCATGCTGATGTGCATTACTTCAAA CAAGTCAGGGAGCTTCATGATGAGCTTTTTAGTGATGATTTTGATGGCCAAACATTTCCA GATAGGATAAAACTGAACAGGAGTGACAGGACAAACACAATTGAGGGTAGTGCAGCTAAA ATAAGAAGTTTGGATGATCTTGATTCTGATACGAGGGACCTTTTCTTGATTAATGATGCT TATGGAGCAGAAGGGGAGCTGGGTATTATTTTGTCTGAAAAGTTCATGGAGCATGACGCT TATTGTATGTTTGAGAGTTTGATGCATGGTTCGATGAATGGTGCACAAGGTGTGGTTGCT ATTACTGACTTCTATTCTCTCAGTCCTGCACCAGAATCAAGCACAGGTTTAACACCTGTA AGGGAGGCATCATCTGCAATATATCACTTGCTTGCTAGTGTGGATTCCCCTCTTCACAGT CATTTGATGGAGTTGGGAGTAGAGCCTCAGTACTTTGCGCTACGATGGCTGAGAGTTCTA TTCGGTCGTGAATTTTCACTTGACAATCTTCTGTTTATTTGGGATGAGATCTTCTCATCT CCTAACCATTCATATTGTGCAGACATAAAGAATCAATCAGACTATCAGTTTAAGATTTTA TGTTCTCATCGTGGTGCCCTGATTTTGTCAATGGCAGTTTCAATGATGCTCCATCTCAGA TCTTCCTTGCTAGGAAGTGAACATGCAACTTCATGCCTAGTAAGATTGTTAAATTTTCCT GGAGACACTGACTTAAAGAGCTTGATTGATAAAGCCAAATTATTGCAACCTTTTGCTCTT GAAGCAAATCTTCCTTCATCTCCTCTCAGAGGAAAATCTCCCTTGAATCCACCCAACTAC TGGGAAGAGACATGGAAGATACTCCAGATGTCAGAAGAGAAAAGAAGTGGTGGTTCAATT AATAGGATGAAGGTAAGAGGTTTGTTCAGAAGAAGTTCCCCCAACACTGAATCAAATGTT TCGAGAACCAAGGATGCTAATTTTGAAGATAGCAATTCGACTTCAGAGAATATGATCACC ACCTCAAACAATGTATTGGAGGCAGGACAGCCTGAAGTTCACCGCTCCAGTTCTGTTGAT GTTAGAGATGCTCTTGGAGTTGCATGTGGAAATTTATCAAGAGACAGCAGTACCTCGTTA TCATGTGGTACGGAGTATGACCATGAGACTCATCATGCAGATGAGCCATGTGCTTCCCAT GATGATAAGGTGGTTAGTGAGCCTGATCCACTCCCTGTGCATAATGATAAGATTGATGAA GTGACAATCGCAGCCATTCAAACATGTGCATTGGTCGATTATCAGCAATCACAACAGAAT AAACCGTGTTCTGTTAATGGGAAATCAGAGGTAAAATATCAACAAAATTTTGCTGTGCAT GAAGTTGGCCGCAAAGAAACATTTGAACTAGGTTCAAGCTCAGATGTGGCTGATAAAGAG CTACTTGGAACATTAAGGTTACTTGGGGAATCTATGGTTGAAAACATTGAGGTTATTGAC TTGTTGTTTCAACCAAATTTGCACTCTACCTCACTGGATAAATCAGAGGAAATTGTTCTT GGTAGTATAGAGCAAGCTAAAGCAAAAGCAGCTCTAGAAGGTCTCAAGAAGATTAGTGAA CTTCTACGACGAATCTAA

Peptide Sequence

PEP ID	Os06t0661700-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:27265304:27269890:-1 gene:Os06g0661700 transcript:Os06t0661700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0661700-01);RabGAP/TBC domain containing protein. (Os06t0661700-02)
Sequence	MPECPARERFSALRGARWRADLGVLPDCASVSTEEFRRAAADSRRRYANLRRRLLIDPHL SKDEENAPDLAVENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNFFQTTICQSM LGRILLVWSLRYPELGYKQGMHELLAPLLYVLHADVHYFKQVRELHDELFSDDFDGQTFP DRIKLNRSDRTNTIEGSAAKIRSLDDLDSDTRDLFLINDAYGAEGELGIILSEKFMEHDA YCMFESLMHGSMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDSPLHS HLMELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSPNHSYCADIKNQSDYQFKIL CSHRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPGDTDLKSLIDKAKLLQPFAL EANLPSSPLRGKSPLNPPNYWEETWKILQMSEEKRSGGSINRMKVRGLFRRSSPNTESNV SRTKDANFEDSNSTSENMITTSNNVLEAGQPEVHRSSSVDVRDALGVACGNLSRDSSTSL SCGTEYDHETHHADEPCASHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQN KPCSVNGKSEVKYQQNFAVHEVGRKETFELGSSSDVADKELLGTLRLLGESMVENIEVID LLFQPNLHSTSLDKSEEIVLGSIEQAKAKAALEGLKKISELLRRI

Transcript Sequence

Transcript ID	Os06t0661700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:27265304:27269890:-1 gene:Os06g0661700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0661700-01);RabGAP/TBC domain containing protein. (Os06t0661700-02)
Sequence	ACGCTTTCCCTTCTTCCCTCCCAATCCCAATCCCTCCCAAGAACGCTCCCCCCGTGTCCT CCTCGATCCCAATCCTCTCCTCGCTTGGCCCTCCTCGTGCTCGCGGATCGACCCACCCAA CCCAGCTGATGATTTGCTCCGGCCGCCTTCTCATGCTTCCTTTTGCCTGATTTGTTAGGG AGGCTGGAAGCCAAAAGGCAGCGGCAATGCCGGAGTGTCCAGCGAGGGAGCGGTTCTCCG CGCTCCGCGGCGCCCGGTGGCGCGCCGATCTCGGCGTCCTCCCCGACTGCGCCTCCGTGT CCACCGAGGAGTTCCGCCGAGCCGCCGCCGACTCCCGCCGCAGGTATGCTAATTTGCGGC GGCGGCTGTTAATAGATCCCCATCTCTCTAAGGATGAAGAAAACGCTCCTGACCTTGCTG TGGAAAATCCACTATCACAGAACCCAGAAAGCACTTGGGGCCAATATTTCAGAAATGCAG AACTAGAGAAAATGTTGAACCAAGATTTGTCTCGGCTCTACCCTGAATTGGGAAATTTCT TCCAAACAACCATATGTCAGTCCATGCTTGGACGTATACTGTTAGTTTGGAGCCTTAGGT ACCCAGAGCTCGGTTACAAACAAGGAATGCATGAGCTCTTAGCTCCTCTTCTCTATGTCC TCCATGCTGATGTGCATTACTTCAAACAAGTCAGGGAGCTTCATGATGAGCTTTTTAGTG ATGATTTTGATGGCCAAACATTTCCAGATAGGATAAAACTGAACAGGAGTGACAGGACAA ACACAATTGAGGGTAGTGCAGCTAAAATAAGAAGTTTGGATGATCTTGATTCTGATACGA GGGACCTTTTCTTGATTAATGATGCTTATGGAGCAGAAGGGGAGCTGGGTATTATTTTGT CTGAAAAGTTCATGGAGCATGACGCTTATTGTATGTTTGAGAGTTTGATGCATGGTTCGA TGAATGGTGCACAAGGTGTGGTTGCTATTACTGACTTCTATTCTCTCAGTCCTGCACCAG AATCAAGCACAGGTTTAACACCTGTAAGGGAGGCATCATCTGCAATATATCACTTGCTTG CTAGTGTGGATTCCCCTCTTCACAGTCATTTGATGGAGTTGGGAGTAGAGCCTCAGTACT TTGCGCTACGATGGCTGAGAGTTCTATTCGGTCGTGAATTTTCACTTGACAATCTTCTGT TTATTTGGGATGAGATCTTCTCATCTCCTAACCATTCATATTGTGCAGACATAAAGAATC AATCAGACTATCAGTTTAAGATTTTATGTTCTCATCGTGGTGCCCTGATTTTGTCAATGG CAGTTTCAATGATGCTCCATCTCAGATCTTCCTTGCTAGGAAGTGAACATGCAACTTCAT GCCTAGTAAGATTGTTAAATTTTCCTGGAGACACTGACTTAAAGAGCTTGATTGATAAAG CCAAATTATTGCAACCTTTTGCTCTTGAAGCAAATCTTCCTTCATCTCCTCTCAGAGGAA AATCTCCCTTGAATCCACCCAACTACTGGGAAGAGACATGGAAGATACTCCAGATGTCAG AAGAGAAAAGAAGTGGTGGTTCAATTAATAGGATGAAGGTAAGAGGTTTGTTCAGAAGAA GTTCCCCCAACACTGAATCAAATGTTTCGAGAACCAAGGATGCTAATTTTGAAGATAGCA ATTCGACTTCAGAGAATATGATCACCACCTCAAACAATGTATTGGAGGCAGGACAGCCTG AAGTTCACCGCTCCAGTTCTGTTGATGTTAGAGATGCTCTTGGAGTTGCATGTGGAAATT TATCAAGAGACAGCAGTACCTCGTTATCATGTGGTACGGAGTATGACCATGAGACTCATC ATGCAGATGAGCCATGTGCTTCCCATGATGATAAGGTGGTTAGTGAGCCTGATCCACTCC CTGTGCATAATGATAAGATTGATGAAGTGACAATCGCAGCCATTCAAACATGTGCATTGG TCGATTATCAGCAATCACAACAGAATAAACCGTGTTCTGTTAATGGGAAATCAGAGGTAA AATATCAACAAAATTTTGCTGTGCATGAAGTTGGCCGCAAAGAAACATTTGAACTAGGTT CAAGCTCAGATGTGGCTGATAAAGAGCTACTTGGAACATTAAGGTTACTTGGGGAATCTA TGGTTGAAAACATTGAGGTTATTGACTTGTTGTTTCAACCAAATTTGCACTCTACCTCAC TGGATAAATCAGAGGAAATTGTTCTTGGTAGTATAGAGCAAGCTAAAGCAAAAGCAGCTC TAGAAGGTCTCAAGAAGATTAGTGAACTTCTACGACGAATCTAACGTGTATATTTGTGGA AACTCGCAAGAGTAGCTCTAACTACCTGTTCCATACTTCCATGATATATTTTCATTTTTT TTCACACAAGTTCTAACTTAACAGAATTGTTGTACTGAACGAACAATGGATAAATGGTCC AATTGCTTTGTAGATATTTTGTACATGTTCCATGTAAGCTGATGAAATCATCACTGTATA TTTGAACAACTCTTGGCTGATTTTGAAGTGCTGCTGGCCTTCCGATTTTATATGGCTTTG CTTTTAGCATTGGCAGACCCAATGATGGATAAGCAATGTTTGTTCATATCCTTTTTCCGG CCCCATTGTTTGGCAGCATATTTGCAAACGAGAAGTAATTTGT