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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0660400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:27209776:27210287:-1 gene:Os06g0660400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.1 protein. (Os06t0660400-01)
Sequence

GCTAGCTACTACCACCTGAGTTTGCTGTTGCTGTTGCTGTTGTTGCATGCGGCTGTGACG
GCGGCGGCGGAGATGATGTGCGGGAAGGAGGAGAAGCTGCTCGGGGTGCAGAAGGCGCCG
GGGAGTTGCCCGTACTGCGGCGGAGGGGTGGCGGCGACGGACGTGGAGGCCAAGTGGGTG
CTCTGCTTCCTCCCGCTCTGCCTCAACAACAAGCGGAGGTTCTCCTGCACCGCCTGCAAC
CGCCGCCTCGTCTCCTACCCCGCAATTGTCCATGACTAG

Peptide Sequence

PEP ID

Os06t0660400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:27209776:27210287:-1 gene:Os06g0660400 transcript:Os06t0660400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.1 protein. (Os06t0660400-01)
Sequence

ASYYHLSLLLLLLLLHAAVTAAAEMMCGKEEKLLGVQKAPGSCPYCGGGVAATDVEAKWV
LCFLPLCLNNKRRFSCTACNRRLVSYPAIVHD

Transcript Sequence

Transcript ID

Os06t0660400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27209776:27210287:-1 gene:Os06g0660400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.1 protein. (Os06t0660400-01)
Sequence

ATCGGCAGTGGCAGTGCAGTGCAAAACGAGAATTAATCTAGGCTAGCTACTACCACCTGA
GTTTGCTGTTGCTGTTGCTGTTGTTGCATGCGGCTGTGACGGCGGCGGCGGAGATGATGT
GCGGGAAGGAGGAGAAGCTGCTCGGGGTGCAGAAGGCGCCGGGGAGTTGCCCGTACTGCG
GCGGAGGGGTGGCGGCGACGGACGTGGAGGCCAAGTGGGTGCTCTGCTTCCTCCCGCTCT
GCCTCAACAACAAGCGGAGGTTCTCCTGCACCGCCTGCAACCGCCGCCTCGTCTCCTACC
CCGCAATTGTCCATGACTAGTAGTAGTAGCGACCTCTCTTTCTCTTCTCTTCCTTTTTCT
TTTCTTTTGTTTTATTTTCTTTTCCCCTGATTCGGAGATTTGTCGTCGTCTATCTTCTCC
GGGAAGGTGATTTGATAAATTCTGTTCTAGATCTGGAACTAGCTGCTTCTTTCCCAGCGA
GAAGAAAAATAGAGCATATGTAGTATTTGATG