Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0658500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:27068985:27074406:1 gene:Os06g0658500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0658500-01)
Sequence

ATGGAGTCACCCGCCGCGGGCGGCGCGTCTCCGGCGCCGGAGGCTCCTCCGCCCCCGCCG
AGGGGGTGGATCTCCGGCCTCGTCTCCGGAGCCGGCCGGATCCTCGCCTCCGTGCTAGGT
CCCGACTCGCCTGCCGCCGCCTCCGGCTCCGCCACGACGACCTCAGCCACGTCGCCGTCC
GCGTCCTCCTCCCCGGCGTCGTCCAGGCATCCCGGTTATATTCGAGATCATGGTAATTCC
CCACTATTTTTTCCGAAAGCTAATAAGTTAAACAAGAGTGAAAATGAAGCAATTATGAAA
GATTATTCTGAGGCATCACTAGCAATTATCTCAGAGATTGAGCCGAAGGATGCCATAATG
CAGTTACTTAAGCAGGAGACTTATTCAAGGTCTGAATGCAATGCACTAGTAAAGATAATT
CAAGAGCGGGTTGTGGACTCAAATTTAAATGGAGTTGATGCTGGTGGGCTTGCTCTTCCA
ATCAATTGGAAGACTGGCAGACAAGCAAATATTGGATATTCTTCATTGAGTCCAAAAGGA
TTGTTGCCTGCAACTTCAATTCCTCCAGTCCAGGACCATGTTTTTGATAATAGTGCTGGT
GCCGGTGCATCTACAACAATAGCTCATGATAGGGGTCCTTTCGCCCACGCTACTGATAAG
ATTCAATCCGTACTCAAAAGAAGTTGCTCTGTTGCAACGGATACCCCTGACCCTGAGGAC
TCCCGAAGAGTCAGGCCAAAAATTAATGGAAATTCATTAGAAATTTCAAATTTTAAGCAA
GTCGATGTTATTCGAACTCATTCAGGAGATGACAATAAATTATCAGATGTTCCCCTTTTT
GGGACCAACAATTTAATATATTCTAATATTGTTTCAATTGTTGGGAGTGCCGATGAAAAA
ATAGGCATACCTAACAAACCTTCAGCTGGTGATGGCAATAAAAACTATGATTCTGAATTT
TTAAATCCATGTACCAATAAGGATCTGAAGAACAGCTTTCCATTGAAGGTGGAACCTTTG
GATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAGCATGAGCAT
GCTGCATGTGATGATTATTGTTCTGTCTCAAAATTAATGTTTAAGGAGGATATTGAGACT
GCACTCAGCATGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGGAGACGAAGG
GCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCACGTCGCAAG
AGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAGGGTTCACAT
GATGTCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCACTGATGGAG
CAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCAAGGAAGGCA
AAATGA

Peptide Sequence

PEP ID

Os06t0658500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:27068985:27074406:1 gene:Os06g0658500 transcript:Os06t0658500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0658500-01)
Sequence

MESPAAGGASPAPEAPPPPPRGWISGLVSGAGRILASVLGPDSPAAASGSATTTSATSPS
ASSSPASSRHPGYIRDHGNSPLFFPKANKLNKSENEAIMKDYSEASLAIISEIEPKDAIM
QLLKQETYSRSECNALVKIIQERVVDSNLNGVDAGGLALPINWKTGRQANIGYSSLSPKG
LLPATSIPPVQDHVFDNSAGAGASTTIAHDRGPFAHATDKIQSVLKRSCSVATDTPDPED
SRRVRPKINGNSLEISNFKQVDVIRTHSGDDNKLSDVPLFGTNNLIYSNIVSIVGSADEK
IGIPNKPSAGDGNKNYDSEFLNPCTNKDLKNSFPLKVEPLDVCIPFEQQMMDLSHQKHEH
AACDDYCSVSKLMFKEDIETALSMPVGVPLENGSKNRRRRAPNTQRITPARSPAKGSRRK
SNDVTVKSETDLLEQSKGSHDVTVKSEIDLLEQSKLALMEQSPDLGDIPVKRPVGRPRKA
K

Transcript Sequence

Transcript ID

Os06t0658500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:27068985:27074406:1 gene:Os06g0658500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0658500-01)
Sequence

GATTTCTCCTCCCCTCCCCTCCCCTCCCCTTCCCACCGCCTCCGCCCTTCGTCGTCGTCG
TCGTCGCGCATGGAGTCACCCGCCGCGGGCGGCGCGTCTCCGGCGCCGGAGGCTCCTCCG
CCCCCGCCGAGGGGGTGGATCTCCGGCCTCGTCTCCGGAGCCGGCCGGATCCTCGCCTCC
GTGCTAGGTCCCGACTCGCCTGCCGCCGCCTCCGGCTCCGCCACGACGACCTCAGCCACG
TCGCCGTCCGCGTCCTCCTCCCCGGCGTCGTCCAGGCATCCCGGTTATATTCGAGATCAT
GGTAATTCCCCACTATTTTTTCCGAAAGCTAATAAGTTAAACAAGAGTGAAAATGAAGCA
ATTATGAAAGATTATTCTGAGGCATCACTAGCAATTATCTCAGAGATTGAGCCGAAGGAT
GCCATAATGCAGTTACTTAAGCAGGAGACTTATTCAAGGTCTGAATGCAATGCACTAGTA
AAGATAATTCAAGAGCGGGTTGTGGACTCAAATTTAAATGGAGTTGATGCTGGTGGGCTT
GCTCTTCCAATCAATTGGAAGACTGGCAGACAAGCAAATATTGGATATTCTTCATTGAGT
CCAAAAGGATTGTTGCCTGCAACTTCAATTCCTCCAGTCCAGGACCATGTTTTTGATAAT
AGTGCTGGTGCCGGTGCATCTACAACAATAGCTCATGATAGGGGTCCTTTCGCCCACGCT
ACTGATAAGATTCAATCCGTACTCAAAAGAAGTTGCTCTGTTGCAACGGATACCCCTGAC
CCTGAGGACTCCCGAAGAGTCAGGCCAAAAATTAATGGAAATTCATTAGAAATTTCAAAT
TTTAAGCAAGTCGATGTTATTCGAACTCATTCAGGAGATGACAATAAATTATCAGATGTT
CCCCTTTTTGGGACCAACAATTTAATATATTCTAATATTGTTTCAATTGTTGGGAGTGCC
GATGAAAAAATAGGCATACCTAACAAACCTTCAGCTGGTGATGGCAATAAAAACTATGAT
TCTGAATTTTTAAATCCATGTACCAATAAGGATCTGAAGAACAGCTTTCCATTGAAGGTG
GAACCTTTGGATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAG
CATGAGCATGCTGCATGTGATGATTATTGTTCTGTCTCAAAATTAATGTTTAAGGAGGAT
ATTGAGACTGCACTCAGCATGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGG
AGACGAAGGGCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCA
CGTCGCAAGAGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAG
GGTTCACATGATGTCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCA
CTGATGGAGCAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCA
AGGAAGGCAAAATGAATGCTAGACAAATTTGATGTCCTCAAATCTGTCCATGGTCTTATG
TATATCATCTCTGAAGAACCTGAAAAGTCACAATCTCTGAAGGACATTGCAGCCTTCACT
CTTGTACAGATGTCTGTTCCATCTGACATGTGTATCAAGTATTAGACAGAAGGAAAGGGA
AACATTGCCATGTACCCAGTAGTCTAACTTATGTCTGTTAATTGGTAAATGTAGTAATGT
ACTCAACATGTAGGTGTAGTGCATGTCACAAACTTCATTTGATGCATTTCTGGCTCTTGC
ACTCCTGCTGTCTATGTGTAAAGTTCTGATATTCAGGGTACGTTTGACAAAGCTCCGGAT
CTTGTCTGGATCAGAAGTTTGTAAGTTAAATCGAAGTGATTTAAAATTGTACATTTCATT
TAGAATAGGAACCGAATTATTCATTCAATTGTTACTGACATAATCCCTAATTCAAATCAT
GGATTTCTGG