Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0656500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26943193:26949889:-1 gene:Os06g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 4 description:4-coumarate:coenzyme A ligase, Lignin biosynthesis, Defense against wounding (Os06t0656500-01);Similar to cDNA clone:J023002B16, full insert sequence. (Os06t0656500-02)
Sequence	ATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGAGGAGGAGACGGTGGTGTTCCGG TCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCACCCTGCAGGCCTACTGCTTCGAG AAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGACGGGCAGACCGGGGCGGTGTAC AGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGCGGCGGGGCTGCGGCGGCTCGGG GTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAACTGCCCCGAGTTCGCCTTCACC TTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCACCGCCAACCCGTTCTACACCCCG CACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAGGGTGATCGTGACCGAGGCGTGC GCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGGCATCCCCGTGGTCGCCGTCGAC GGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGATGCTGGACGCGTCCATCGAGCCG CTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGTCGCCCTCCCTTACTCCTCCGGC ACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCGTCACCAGCGTCGCG CAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAGGAGGGAGGACGTGGTGCTGTGC TTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGTGCTGCTGGCGGGGCTGCGAGCC GGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGACGCGG AGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGC CCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCATGGTTATGTCCGGCGCCGCCCCC ATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGATCCCCAACGCCGTCCTGGGACAG GGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCATGTGTCTGGCCTTCGCAAAGGAG CCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGTCAGAAACGCGGAGCTGAAGATC GTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCAGTCCGGGGAGATTTGCATCCGG GGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGAGTCCACGAAGAACACCATCGAC AAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGTTGACGACGACGACGAGATTTTC ATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGGGTTCCAAGTACCTCCTGCGGAA CTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGATGCTGCCGTTGTACCGATGATA GACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGTACGGATTGAAGGATCTGCAATC AGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGTTGTTTTCTACAAGAGGCTCAAC AAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTCTGGCAAGATTCTCAGGAAGGAC CTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGATAATACACAGTTGAAAAGCTAA

Peptide Sequence

PEP ID	Os06t0656500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26943193:26949889:-1 gene:Os06g0656500 transcript:Os06t0656500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 4 description:4-coumarate:coenzyme A ligase, Lignin biosynthesis, Defense against wounding (Os06t0656500-01);Similar to cDNA clone:J023002B16, full insert sequence. (Os06t0656500-02)
Sequence	MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVY SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTP HEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGDFDGCVGFGEAMLDASIEP LDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRREDVVLC LLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALVDLTRRHGVTVAPFVPPIVVEIAKS PRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKE PFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTID KGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMI DEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKD LRAKLAAGIPTNDNTQLKS

Transcript Sequence

Transcript ID	Os06t0656500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26943193:26949889:-1 gene:Os06g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 4 description:4-coumarate:coenzyme A ligase, Lignin biosynthesis, Defense against wounding (Os06t0656500-01);Similar to cDNA clone:J023002B16, full insert sequence. (Os06t0656500-02)
Sequence	TATTAACAAACGCTTCGCCTGCCCCCAATTCCTCTCTCTTCCTCTCATCAGTCAAGAGCG GAAGAGCTCGACACATCTCTCCGATCCCCATTTCGCCTTCTGCTCCGGTGAGCTCCGATC TGACTGCGCGTGGGGGGAATCGATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGA GGAGGAGACGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCAC CCTGCAGGCCTACTGCTTCGAGAAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGA CGGGCAGACCGGGGCGGTGTACAGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGC GGCGGGGCTGCGGCGGCTCGGGGTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAA CTGCCCCGAGTTCGCCTTCACCTTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCAC CGCCAACCCGTTCTACACCCCGCACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAG GGTGATCGTGACCGAGGCGTGCGCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGG CATCCCCGTGGTCGCCGTCGACGGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGAT GCTGGACGCGTCCATCGAGCCGCTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGT CGCCCTCCCTTACTCCTCCGGCACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCG CAGCCTCGTCACCAGCGTCGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAG GAGGGAGGACGTGGTGCTGTGCTTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGT GCTGCTGGCGGGGCTGCGAGCCGGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGG CGCGCTGGTGGACCTGACGCGGAGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCAT CGTGGTGGAGATCGCCAAGAGCCCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCAT GGTTATGTCCGGCGCCGCCCCCATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGAT CCCCAACGCCGTCCTGGGACAGGGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCAT GTGTCTGGCCTTCGCAAAGGAGCCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGT CAGAAACGCGGAGCTGAAGATCGTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCA GTCCGGGGAGATTTGCATCCGGGGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGA GTCCACGAAGAACACCATCGACAAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGT TGACGACGACGACGAGATTTTCATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGG GTTCCAAGTACCTCCTGCGGAACTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGA TGCTGCCGTTGTACCGATGATAGACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGT ACGGATTGAAGGATCTGCAATCAGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGT TGTTTTCTACAAGAGGCTCAACAAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTC TGGCAAGATTCTCAGGAAGGACCTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGA TAATACACAGTTGAAAAGCTAAATCTGATAATATTTTTTCCTCTTTATACACCAGTTTCA AAAATCATGTAATATTCTTTATGAAATGGCAGAAATACGTATAGAAGGGCCATATGGTTC AATTCTTTTAGATGGCTAAGTTATACTTTGTTTGTATGCCCGTTATGTGTACCGTGTCAT GTATAGATACCTTTTTTTTTTCTTTTTGAATTTTGACAACAAGGCTGATTATAATGTATA CCACGTTTCAATT