Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0654000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26785125:26790388:-1 gene:Os06g0654000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os06t0654000-01)
Sequence	TCTCAAGGATGTCAGTCAAAGCATTGGCAATCTGGTCACAAGTTCAAGTGCAAACAAATG AAAAAATCAAGCCCTGCTGACAAGCTATCAGGTGGAGGCGAGGAAGACAGAAATAAGTTA TCTGGTTTTGGTCCCATCTCATTAGTACCTGCCCGTAGAAAATTAAACAAGGTCATCTTT CCATATGATGAATTTCTAAAGCTGTGCAACTGGAGGGACCTTGATTATTTACCTTGTGGC CTTTTGAATTGTGGCAACAGTTGCTTTGCCAATGTTGTTTTACAATGTCTTTCATGTACG AGGCCACTTGCAGCCTATCTCTTAGGAATGGACCATAGCAGGGAATGTTATAAGAGACAT GAAGATTGGTGTTTCTTGTGCGAACTGCAATGCCATATCCAAAGGGCAAGTGAAAGTATG CATCCATTTGCGCCGAAGAACATTCTTTCTCACCTGCCAAATATAGGTGGGAACCTTGGC TTTGGTAGACAAGAGGATGCTCATGAATTCATGAGGTTTGCAATAGATAAGATGCAATCT GCTTGTCTTGATGAATTTGGAGGCGAGAAGGCTGTAGACCCTAGCACGCAAGAAACGACT CTTATTCAACACATATTTGGTGGTCGTCTGCAATCCCAGGTTCAATGTACTGCATGTGGA ATGGTCTCAAATCGCTATGAGAATATGATGGACTTAACAGTTGAAATTCATGGTGATGCT GACTCCTTGGAAGAATGCTTAGATAAGTTCACTGCAGTAGAGTGGCTTGATGGTGATAAT AAGTACAAATGTGATGGATGCAGCGACTATGTCAAAGCACAGAAACGTCTTACAGTTTAT CAAGCTCCAAATATCCTCACAATTACTCTGAAAAGATTCCAGAGTGGTAGATTTGGGAAA CTAAACAAGAGAGTTACATTCCCAATGAAGTTAGACCTAACGCCATACATGAGTAGCACT GATGGAAGTGACCAATACGATCTCTATGCTGTTGTTGTTCATCTGGATATGCTCAATGCT TCATTTTTTGGGCATTATATATGCTATATAAAAAATTACCGAGGACGCTGGTATAAAATT GATGACTGCAAGGTTATGGCTGTTGATGAGGAGGAAGTACATGCTCAAGGTGCTTATATG CTTCTATATAGCAGGAGAACAGCTCGCCCTAGGCCACTAATTGCAGTAGAAGAACTCATG AAACAGCAGCAACAGTTGAAAGTATGCCCTTTGAATGGACAAAATCATTTGATACAAGAG GATGTGCCATTAGAAGGCGTGCCATCTTTGAAACCCTCAGAAGATCTGGAAGTTGATTTT GAATCCAACAACAAATCTTTACATACTATGGACAGAGAGCCAGACCTGGATTTTCATGTG AGCTTTGATAGAGATAAGTTCACTAACAATGATATTATGCACCCACCAGTTTCAACGGTA TCGCATGCCCTTGATGAAAATACTAGAGGAGATTCAGGTTTTCCATTGGAAGAATCGAAC ACCATGGGATCTGTGCAATTTGGCAACTCCACATATGAAACATCTTTAGTGCATTCCCCT GCAGAGCAGTGTGAAGAACCTGCGTCATGTATTGATTCAGTTGACTACATGGAAATTGAC ACTGAAGCTGGCGTTAAAGTTGAAAGATGGAGCAGGCCTGCCTTAGGTGATTCAGTTGGA GTGATGGGGAATGGTACATTGGTCCCGGCATTGGAGAATGGTTTGGCGGGTAAACCAATT CCTGGTTTTCCCGACAAACCCTCGAGAATAAATTCATTCTTTGCAGAAGGATGTCAAACT GGTGACAATGGTGCTGGTTCCTCGCAAGAGTTGAATGGTCATTGCAATGGAGAACCCAGT TGCCCAGAGCAAGGAGTTCTGACCAATGGTGGCAACACGCCCTCTCCAAGCACACAATGC TATGAAAATAAGTTTGCAACATCCACCAACGGCAACTATTCTATTGGGAATGGTGATACA TTATCTAGCAGCAACTCATTACATGCGGGCAAACAGAATGCTGGCTTTACCTATAATGGT TTCAATCCAAAACCTTACAAAGAACCATCAGGAAGCAACACATATCTGAATAATACATGC AATGGTAAACCATCGGAAGATAATCACAATAAATGTGCCCCAAACCTGCCGGCAAAAGAT TGCCAAGGGGGCATGCCATTCTTACATCGTGGCTTCCTTCTAAGGCCTTGTTCTAGGGGA AATCCAGGCAAATGTGATGATGGCTTGTCAATTAGTAATGGCACATCATCATCCTTTGTG AGTAGTAACAGCAAATCAAGTAATATTTCATCATCTCGAAATGGTGAAGGAGGCACACCA TTCTTGTCTCCTAGTTTTCGCACAAATCATTGCAGAGAGTCAGCTGCCATGGACACCTCT GCAAGCTCTGTCCATGATTTGAAAACCAGCTATAACATTTCCTTGGAGCAAAAATCTATT GGTGCTGCAGTACCGTCAGACCTGATAAAAGAAAGTTGGGGTGAAGATGGCACGACTTTT GGCACTGTTTACCAACAAAGAGCAACTTCTGTTGATAATGTAAGCAGCCGCCATGATGAA AATGGGCATGTGATTTTGGGTGCCAATAATTCCAGTTATGGAGGAGAAAACGGCAGTAAT AATGGAATTCTTGATATGAATAGCAGCAGTAGCCAAAGGGACGCAGCATCTAGTACCATG ATGGCTTCTGAGAAAGGCATAGGACCTAAAACAGCTGACCAAGTCAATTACATATCTGAT GCACTTGAACATGATGGTTTGCGACGAAGATTAACCTCAAATTTTCCTGATCAGAATGGT ATTGATGCTCAATAA

Peptide Sequence

PEP ID	Os06t0654000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26785125:26790388:-1 gene:Os06g0654000 transcript:Os06t0654000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os06t0654000-01)
Sequence	SQGCQSKHWQSGHKFKCKQMKKSSPADKLSGGGEEDRNKLSGFGPISLVPARRKLNKVIF PYDEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRH EDWCFLCELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQS ACLDEFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDA DSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGK LNKRVTFPMKLDLTPYMSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKI DDCKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEELMKQQQQLKVCPLNGQNHLIQE DVPLEGVPSLKPSEDLEVDFESNNKSLHTMDREPDLDFHVSFDRDKFTNNDIMHPPVSTV SHALDENTRGDSGFPLEESNTMGSVQFGNSTYETSLVHSPAEQCEEPASCIDSVDYMEID TEAGVKVERWSRPALGDSVGVMGNGTLVPALENGLAGKPIPGFPDKPSRINSFFAEGCQT GDNGAGSSQELNGHCNGEPSCPEQGVLTNGGNTPSPSTQCYENKFATSTNGNYSIGNGDT LSSSNSLHAGKQNAGFTYNGFNPKPYKEPSGSNTYLNNTCNGKPSEDNHNKCAPNLPAKD CQGGMPFLHRGFLLRPCSRGNPGKCDDGLSISNGTSSSFVSSNSKSSNISSSRNGEGGTP FLSPSFRTNHCRESAAMDTSASSVHDLKTSYNISLEQKSIGAAVPSDLIKESWGEDGTTF GTVYQQRATSVDNVSSRHDENGHVILGANNSSYGGENGSNNGILDMNSSSSQRDAASSTM MASEKGIGPKTADQVNYISDALEHDGLRRRLTSNFPDQNGIDAQ

Transcript Sequence

Transcript ID	Os06t0654000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26785125:26790388:-1 gene:Os06g0654000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os06t0654000-01)
Sequence	GTTCTCAAGGATGTCAGTCAAAGCATTGGCAATCTGGTCACAAGTTCAAGTGCAAACAAA TGAAAAAATCAAGCCCTGCTGACAAGCTATCAGGTGGAGGCGAGGAAGACAGAAATAAGT TATCTGGTTTTGGTCCCATCTCATTAGTACCTGCCCGTAGAAAATTAAACAAGGTCATCT TTCCATATGATGAATTTCTAAAGCTGTGCAACTGGAGGGACCTTGATTATTTACCTTGTG GCCTTTTGAATTGTGGCAACAGTTGCTTTGCCAATGTTGTTTTACAATGTCTTTCATGTA CGAGGCCACTTGCAGCCTATCTCTTAGGAATGGACCATAGCAGGGAATGTTATAAGAGAC ATGAAGATTGGTGTTTCTTGTGCGAACTGCAATGCCATATCCAAAGGGCAAGTGAAAGTA TGCATCCATTTGCGCCGAAGAACATTCTTTCTCACCTGCCAAATATAGGTGGGAACCTTG GCTTTGGTAGACAAGAGGATGCTCATGAATTCATGAGGTTTGCAATAGATAAGATGCAAT CTGCTTGTCTTGATGAATTTGGAGGCGAGAAGGCTGTAGACCCTAGCACGCAAGAAACGA CTCTTATTCAACACATATTTGGTGGTCGTCTGCAATCCCAGGTTCAATGTACTGCATGTG GAATGGTCTCAAATCGCTATGAGAATATGATGGACTTAACAGTTGAAATTCATGGTGATG CTGACTCCTTGGAAGAATGCTTAGATAAGTTCACTGCAGTAGAGTGGCTTGATGGTGATA ATAAGTACAAATGTGATGGATGCAGCGACTATGTCAAAGCACAGAAACGTCTTACAGTTT ATCAAGCTCCAAATATCCTCACAATTACTCTGAAAAGATTCCAGAGTGGTAGATTTGGGA AACTAAACAAGAGAGTTACATTCCCAATGAAGTTAGACCTAACGCCATACATGAGTAGCA CTGATGGAAGTGACCAATACGATCTCTATGCTGTTGTTGTTCATCTGGATATGCTCAATG CTTCATTTTTTGGGCATTATATATGCTATATAAAAAATTACCGAGGACGCTGGTATAAAA TTGATGACTGCAAGGTTATGGCTGTTGATGAGGAGGAAGTACATGCTCAAGGTGCTTATA TGCTTCTATATAGCAGGAGAACAGCTCGCCCTAGGCCACTAATTGCAGTAGAAGAACTCA TGAAACAGCAGCAACAGTTGAAAGTATGCCCTTTGAATGGACAAAATCATTTGATACAAG AGGATGTGCCATTAGAAGGCGTGCCATCTTTGAAACCCTCAGAAGATCTGGAAGTTGATT TTGAATCCAACAACAAATCTTTACATACTATGGACAGAGAGCCAGACCTGGATTTTCATG TGAGCTTTGATAGAGATAAGTTCACTAACAATGATATTATGCACCCACCAGTTTCAACGG TATCGCATGCCCTTGATGAAAATACTAGAGGAGATTCAGGTTTTCCATTGGAAGAATCGA ACACCATGGGATCTGTGCAATTTGGCAACTCCACATATGAAACATCTTTAGTGCATTCCC CTGCAGAGCAGTGTGAAGAACCTGCGTCATGTATTGATTCAGTTGACTACATGGAAATTG ACACTGAAGCTGGCGTTAAAGTTGAAAGATGGAGCAGGCCTGCCTTAGGTGATTCAGTTG GAGTGATGGGGAATGGTACATTGGTCCCGGCATTGGAGAATGGTTTGGCGGGTAAACCAA TTCCTGGTTTTCCCGACAAACCCTCGAGAATAAATTCATTCTTTGCAGAAGGATGTCAAA CTGGTGACAATGGTGCTGGTTCCTCGCAAGAGTTGAATGGTCATTGCAATGGAGAACCCA GTTGCCCAGAGCAAGGAGTTCTGACCAATGGTGGCAACACGCCCTCTCCAAGCACACAAT GCTATGAAAATAAGTTTGCAACATCCACCAACGGCAACTATTCTATTGGGAATGGTGATA CATTATCTAGCAGCAACTCATTACATGCGGGCAAACAGAATGCTGGCTTTACCTATAATG GTTTCAATCCAAAACCTTACAAAGAACCATCAGGAAGCAACACATATCTGAATAATACAT GCAATGGTAAACCATCGGAAGATAATCACAATAAATGTGCCCCAAACCTGCCGGCAAAAG ATTGCCAAGGGGGCATGCCATTCTTACATCGTGGCTTCCTTCTAAGGCCTTGTTCTAGGG GAAATCCAGGCAAATGTGATGATGGCTTGTCAATTAGTAATGGCACATCATCATCCTTTG TGAGTAGTAACAGCAAATCAAGTAATATTTCATCATCTCGAAATGGTGAAGGAGGCACAC CATTCTTGTCTCCTAGTTTTCGCACAAATCATTGCAGAGAGTCAGCTGCCATGGACACCT CTGCAAGCTCTGTCCATGATTTGAAAACCAGCTATAACATTTCCTTGGAGCAAAAATCTA TTGGTGCTGCAGTACCGTCAGACCTGATAAAAGAAAGTTGGGGTGAAGATGGCACGACTT TTGGCACTGTTTACCAACAAAGAGCAACTTCTGTTGATAATGTAAGCAGCCGCCATGATG AAAATGGGCATGTGATTTTGGGTGCCAATAATTCCAGTTATGGAGGAGAAAACGGCAGTA ATAATGGAATTCTTGATATGAATAGCAGCAGTAGCCAAAGGGACGCAGCATCTAGTACCA TGATGGCTTCTGAGAAAGGCATAGGACCTAAAACAGCTGACCAAGTCAATTACATATCTG ATGCACTTGAACATGATGGTTTGCGACGAAGATTAACCTCAAATTTTCCTGATCAGAATG GTATTGATGCTCAATAAACTGTGGTCACCACTGGAGCGCATAAACTGGAAGGCTATGAGC TCAAGTTGTCCGGGTTGAATGGATATAAACTGAAGGGCAATGAGCTGGAAATCGGAAGAA TGCCTGATCTCATATTGGTTGGTTGATTCAATTGATTACTTGAAACTGTAATTGGAGCAA ACATTGTTTGCTTGGCAGTAATTTTGCCTCTTTTCCACATGGCTTCCTCCTGTGAGGTGG AGGGGTGTCTCTGGGCTTCCACACAATTTGCAGAGGCTCAGATGCTCCCCTGATTCCATG TTCTTGTTGCCTTTAGGGTACATAGCAGATTGTAGGCTTACCTTGTTCCCACCATGTTGG TGGATCCATAGCTCAAATAAACCTGAATGCTGACTCCGTTGTCAAGAAAGCTGAATCAAC TGTAGAGTGATAAAAGAGGAAGATTCTGATCGCTTTCTTCATCTGATGCCCGTTTTGACC CCAATTGGTGCAAACAGATTTATGATCTTTACAATGCAACCACGATCTTTGTTGGTCGGA CCAGAACTGTAAGCAACTGATGGTTCTCATTTTTTTGGTTATCACGAAGGTGTATGTTTG CTTAATTGCATTACTGTAACTACCACGATCAGCAAAAGATGGTTTTACGAACATGCCCTT GTGTATGTTCATCAGGCTTAATTTGCAGTGCGGTAATC