Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0653800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26779067:26781799:-1 gene:Os06g0653800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-133 description:Similar to WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5 snRNP- specific 40 kDa protein) (38 kDa splicing factor). (Os06t0653800-01)
Sequence	ATGTTCCCCCCAGGCAACAATTCTTTGGCTCTTTCAGCCCCAAGGCCAGGAATGGAGCTG GCTAACATTCAACAGCATCCTAATCAAGCTCTTGGGCCTGGTGGGAAGCAACGTACATCC AGTCTGGAGGCCCCAATAATGCTACTCACAGGCCATCAGAGCGCTGTGTACTGTATGAAG TTCAACCCTGCAGGAACTGTGATAGCATCAGGCTCCCATGACAAGGATATCTTCTTGTGG TATGTCCATGGTGACTGTAAGAACTACATGGTACTGAGAGGGCACAAGAATGCTGTTCTT GACCTTCAATGGACTACTGATGGGACTCAGATCATCTCTGCAAGCCCTGACAAGACTGTG AGAGTGTGGGACGTTGAGACTGGCAAGCAAGTCAAGAAGATGGCCGAGCACTCATCTTTT GTCAACTCATGTTGCCCGGCTCGAAAGTGGCCACCTCTGGTTGTAAGTGGATCGGATGAT GGAACAGCAAAGCTGTGGGATTTGCGTCAAAGAGGTGCTATACAAACACTTCCCGACAAG TACCAGATTACAGCCGTCAGCTTCTCAGAGGCGGCAGATAAGGTTTTCACTGGTGGCCTA GACAATGATGTCAAATGGTGGGATCTCCGTAAGAATGAAGTGACAGAGTATCTCAAAGGA CACCAGGACATGATAACCGGAATGCAGCTTAGTCCAGATGGGTCTTATCTCCTAACCAAT GCAATGGACAATGAGCTCAAAATCTGGGACTTGCGCCCTTACGCCCCAGAGAACCGGAAC ATCAAGACCCTCACAGGACACCAGCATAACTTTGAGAAGAACCTGTTGAAGTGCAGCTGG TCCCCTGATAATCGCAAGGTCACTGCCGGGAGTGCTGATCGCATGGTCTACATCTGGGAC ACAACATCAAGGCGGATCTTGTACAAGCTTCCTGGCCACAACGGTTCTGTCAACGAGACC GCATTCCATCCCACCGAGCCTGTCATTGGATCTTGCGGCAGTGACAAGCAGATTTATCTT GGGGAGCTTTAA

Peptide Sequence

PEP ID	Os06t0653800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26779067:26781799:-1 gene:Os06g0653800 transcript:Os06t0653800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-133 description:Similar to WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5 snRNP- specific 40 kDa protein) (38 kDa splicing factor). (Os06t0653800-01)
Sequence	MFPPGNNSLALSAPRPGMELANIQQHPNQALGPGGKQRTSSLEAPIMLLTGHQSAVYCMK FNPAGTVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDGTQIISASPDKTV RVWDVETGKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDK YQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTN AMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWD TTSRRILYKLPGHNGSVNETAFHPTEPVIGSCGSDKQIYLGEL

Transcript Sequence

Transcript ID	Os06t0653800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26779067:26781799:-1 gene:Os06g0653800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-133 description:Similar to WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5 snRNP- specific 40 kDa protein) (38 kDa splicing factor). (Os06t0653800-01)
Sequence	GCCCCTTGCTGCGCCGCCTCCCTCGTCTCGTCTCGTTCCTCCCTCTCCGGCGGCCGGATC GGCGAACCCCCTCCCGCCGCCGCACGCGCGCGCGCTCCCCGGCTTCGCCGCCGAGCAGAG GGGTAGCGGAGGCTAGGGCTCCCTTCCGGGAACTTAACTTCCAACTTCAAGATGTTCCCC CCAGGCAACAATTCTTTGGCTCTTTCAGCCCCAAGGCCAGGAATGGAGCTGGCTAACATT CAACAGCATCCTAATCAAGCTCTTGGGCCTGGTGGGAAGCAACGTACATCCAGTCTGGAG GCCCCAATAATGCTACTCACAGGCCATCAGAGCGCTGTGTACTGTATGAAGTTCAACCCT GCAGGAACTGTGATAGCATCAGGCTCCCATGACAAGGATATCTTCTTGTGGTATGTCCAT GGTGACTGTAAGAACTACATGGTACTGAGAGGGCACAAGAATGCTGTTCTTGACCTTCAA TGGACTACTGATGGGACTCAGATCATCTCTGCAAGCCCTGACAAGACTGTGAGAGTGTGG GACGTTGAGACTGGCAAGCAAGTCAAGAAGATGGCCGAGCACTCATCTTTTGTCAACTCA TGTTGCCCGGCTCGAAAGTGGCCACCTCTGGTTGTAAGTGGATCGGATGATGGAACAGCA AAGCTGTGGGATTTGCGTCAAAGAGGTGCTATACAAACACTTCCCGACAAGTACCAGATT ACAGCCGTCAGCTTCTCAGAGGCGGCAGATAAGGTTTTCACTGGTGGCCTAGACAATGAT GTCAAATGGTGGGATCTCCGTAAGAATGAAGTGACAGAGTATCTCAAAGGACACCAGGAC ATGATAACCGGAATGCAGCTTAGTCCAGATGGGTCTTATCTCCTAACCAATGCAATGGAC AATGAGCTCAAAATCTGGGACTTGCGCCCTTACGCCCCAGAGAACCGGAACATCAAGACC CTCACAGGACACCAGCATAACTTTGAGAAGAACCTGTTGAAGTGCAGCTGGTCCCCTGAT AATCGCAAGGTCACTGCCGGGAGTGCTGATCGCATGGTCTACATCTGGGACACAACATCA AGGCGGATCTTGTACAAGCTTCCTGGCCACAACGGTTCTGTCAACGAGACCGCATTCCAT CCCACCGAGCCTGTCATTGGATCTTGCGGCAGTGACAAGCAGATTTATCTTGGGGAGCTT TAAGGGTACTACCATCACATTTTCATCTAGAAGCTATTGTACTATCTTGTTATGAAGGCA AACAGAAACTACCATCCTTGCAATGTTTCTTCATCTGAAAAATTCTAATGCACGATTGAC TGACC