Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0652400-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:26708105:26709667:1 gene:Os06g0652400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-01);Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-02)
Sequence	ATGGGCACCGTCACCACCGCCGATCCGCACGCCTCCTTCCTCGCCGACAAGGGCGGCAAG GTGTTCGTCGCCGGCCACCGCGGCCTCGTCGGCTCCGCCATCCTCCGCCACCTCGTCTCC CTCGGCTTCACCAACGTGGTCGTCCGCACCCACGCCGAGCTCGACCTCACCCGCCAGTCC GACGTCGAGGCCTTCTTCGCCGCCGAGCTCCCCCGCTACGTCGTCCTCGCCGCCGCCAAG GTCGGCGGCATCCACGCCAACTCCACCTTCCCGGCCGACTTCATCGCCGCCAACCTCCAG ATCCAGACCAACGTCGTCGACGCCGCGCTCAAATGCGGCTCCGTCCGCAAGCTCCTCTTC CTCGGCTCCTCCTGCATCTACCCCAAGTTCGCGCCGCAGCCGATCCCGGAGAACTCCCTC CTCTCCGGCCCCCTCGAGCCCACCAACGAGTGGTACGCCGTCGCCAAGATCGCCGGAATC AAGATGTGCCAGGCTTACCGCATCCAGCACGGCTTCGACGCCATCTCGGCCATGCCCACC AACCTCTACGGCCCGCAGGACAACTTCCACCCGGAGAATTCACACGTCCTGCCCGCACTG ATCCGCCGGTTCCATGAGGCGAAGGCGTCCAATGCCGCGGAGGTTGTCGTCTGGGGCACT GGCTCGCCGCTGCGTGAATTCTTGCACGTCGATGACCTTGCAGATGCGGTGATCTTCTTG ATGGATCACTACTCGGGGCTGGAGCATGTCAATGTAGGAAGCGGGAGCGAGGTGACGATC AAGGAGCTCGCGGAGCTGGTGAAGGAGGTGGTTGGGTTCCAGGGGAAGCTGGTATGGGAC TCTAGCAAACCCGATGGCACACCGAGGAAGCTCATGGATAGTTCCAAGATACAGGAGATG GGGTGGAAGCCCAAGGTCCCCCTCAAGGAGGGGCTCGTCGAGACATACAAGTGGTATGTC GAGAATGTCATCTCTGCGAAGAAGTAG

Peptide Sequence

PEP ID	Os06t0652400-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:26708105:26709667:1 gene:Os06g0652400 transcript:Os06t0652400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-01);Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-02)
Sequence	MGTVTTADPHASFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQS DVEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLF LGSSCIYPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPT NLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFL MDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEM GWKPKVPLKEGLVETYKWYVENVISAKK

Transcript Sequence

Transcript ID	Os06t0652400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26708105:26709667:1 gene:Os06g0652400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-01);Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1); 21556- 22494. (Os06t0652400-02)
Sequence	TACTAATAGCCCCCAAATCCCCGTACGCGAATCGCATCTCCTCGTCTCCGGCGGCCGCGG CGATCAACTCCGGCGACATGGGCACCGTCACCACCGCCGATCCGCACGCCTCCTTCCTCG CCGACAAGGGCGGCAAGGTGTTCGTCGCCGGCCACCGCGGCCTCGTCGGCTCCGCCATCC TCCGCCACCTCGTCTCCCTCGGCTTCACCAACGTGGTCGTCCGCACCCACGCCGAGCTCG ACCTCACCCGCCAGTCCGACGTCGAGGCCTTCTTCGCCGCCGAGCTCCCCCGCTACGTCG TCCTCGCCGCCGCCAAGGTCGGCGGCATCCACGCCAACTCCACCTTCCCGGCCGACTTCA TCGCCGCCAACCTCCAGATCCAGACCAACGTCGTCGACGCCGCGCTCAAATGCGGCTCCG TCCGCAAGCTCCTCTTCCTCGGCTCCTCCTGCATCTACCCCAAGTTCGCGCCGCAGCCGA TCCCGGAGAACTCCCTCCTCTCCGGCCCCCTCGAGCCCACCAACGAGTGGTACGCCGTCG CCAAGATCGCCGGAATCAAGATGTGCCAGGCTTACCGCATCCAGCACGGCTTCGACGCCA TCTCGGCCATGCCCACCAACCTCTACGGCCCGCAGGACAACTTCCACCCGGAGAATTCAC ACGTCCTGCCCGCACTGATCCGCCGGTTCCATGAGGCGAAGGCGTCCAATGCCGCGGAGG TTGTCGTCTGGGGCACTGGCTCGCCGCTGCGTGAATTCTTGCACGTCGATGACCTTGCAG ATGCGGTGATCTTCTTGATGGATCACTACTCGGGGCTGGAGCATGTCAATGTAGGAAGCG GGAGCGAGGTGACGATCAAGGAGCTCGCGGAGCTGGTGAAGGAGGTGGTTGGGTTCCAGG GGAAGCTGGTATGGGACTCTAGCAAACCCGATGGCACACCGAGGAAGCTCATGGATAGTT CCAAGATACAGGAGATGGGGTGGAAGCCCAAGGTCCCCCTCAAGGAGGGGCTCGTCGAGA CATACAAGTGGTATGTCGAGAATGTCATCTCTGCGAAGAAGTAGCGCCGTGATGATGATG GCATGTTGTTCTCAATATCTTCTGGCGCCTTTTAAGTTGGTATTACAGTCAATAGTTTTC ATGTTGTTGCTGGCTACTAGATCATACAATTATCAGTTATAAGCTCTCCCACAAAGAAGA GGTCGTTATGTTGGTTGAATAATGTGGGGTCAAACTAGTATACAATTAGAATCTTAATTG ATCTAGAACAATTTCTGTCGATTAGAGAAAGTTTCACACTTTGCAATGTTTGATGTCAAT TGGCCTGAAAAAGTTTTACACACACGGAATAAGTAAGCTATGTTTTGATTTATGAAATAA TTTTATCTGTTCAGAACAGTTTCTATGCTTTGTGCCCTTGTTTTGTATGCTAATTATGGT TGGGAGGTGAGAGGAGATATTAATGGAATAAATTAATTTCTT