Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0652000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26680169:26690049:1 gene:Os06g0652000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA POLYMERASE description:Similar to T3/T7-like RNA polymerase (Fragment). (Os06t0652000-01);Similar to DNA-directed RNA polymerase. (Os06t0652000-02)
Sequence	ATGCTCGACCGGAGGCTCGCGCCCGCGCTGCCCTACGTCAAGTCGCTCTTCCTCGGCTGG TTCGAGCCGCTGCGCGACGCCATCGCCCGGGACCAGGAGGTGCAGCGGCGGAAGCGGGTC AAGCACGTCTACGCCAAGTACCTGCTCCTGCTGCCCGCGGACAAGGTGGCCGTCATCGTC ATGCACAAGATGATGGGCCTCCTCATGTCGAGCAAGGATGGCGTCGCCAGCGTCCGTGTT GTCCAGGCCGCGCACTGCATCGGCGAGGCTGTTGAACGTGAGTTCAAAGTCCAGACATTC TTTCAAAAGACAAGGAAGAAAAGTGCAGGTGAAAATGATTTGGCATTAGAGAAGGAGCAG GCCAAATGCCGAAAACGTGTTAAGAGTTTGGTTAGGAGGAGAAAGTTGACTGAAGCACAG AAGATTGTGCAACAGGAGATTGAATTGGAAGAATGGGGCACAGAATCCCAAGTGAAGTTA GGGACCCGCTTGATTGAGTTGTTACTGGATTCAGCTTTTGTACAGTCACCAGCTGACCAA ACACCAGAGAGTTCTCCAGATATTCGACCAGCATTTAAACACGTACTTCGACAACCTATA GTAGAAAATGGGAGACTGAAGAAAAAGCACTGGGTGATAGAGTGTGACCCTCTTGTGCAT GAGGGGTTTGAAAGCACTGCTAGGCACGTGGAGATACCCTATCTTCCTATGCTTGTGACT CCTAAAAAATGGAAGGGCTATGATACAGGTGGGTACCTTTTTCTTCCCTCATATATTATG CGGACACATGGCGTGAAAGATCAAAAGGAAGCCATTAAGAGTGTTCCGAGAAAACAGCTA CGGAAAGTATTTGAGGCATTAGATACCCTTGGGAGTACTAAATGGAGGGTGAATAGAAGA GTACATAATGCTGTTGAAACTATTTGGAGTCGAGGTGGGGGCATTGCAGGACTGGTTGAT AAGGAAAATATTCCTCTACCTGAACGACCAGAAACGGAGGATCCAGATGAAATACAGAAA TGGAAGTGGAGCTTAAAGAAGGCAAAGAAAGCTAATCGTGAACTGCATGCTGAGCGATGC GATACAGAGCTTAAACTATCTGTTGCTCGGAAAATGAGAGAGGAGGATGGATTTTATTAT CCCCATAATCTTGATTTTCGTGGCCGTGCATACCCTATGCATGCACATCTAAGCCACCTA GGTTCAGATCTATGCAGAGGTGTTCTAGAGTATGCTGAAGGGCGGCCACTAGGAAAGTCT GGCTTACGCTGGTTAAAGATTCATTTGGCTAACAAATATGGTGGAGGAATTGAAAAGCTT TCTCATGAGGACAAGGTAGCATTTGTGGAGAACCAGTTGCCTGATATATTTGATTCAGCA ACTAATCCTGTTGACGGGAATTGCTGGTGGATGAATGCTGAGGATCCTTTTCAATGTTTA GCCGCATGCATGGATCTTTCTGATGCCTTAAAAAGTTCATCACCTCAGTGTGCTGTTTCT CACCTACCTATTCATCAGGATGGTTCATGCAATGGTTTACAACACTATGCTGCTCTTGGA AGAGACTATATGGGTGCAGCTGCTGTCAATTTAGTTCCTGGAGACAAACCTGCAGATATC TACTCAGAGATTGCTGCTAGGGTGCTGGATGTTGTTCGGGAAGACTCGATGGAGGATCCT GCAACTAATCCAACTGCCTCATTAGCAAGGGTTTTAGTCGATCAGGTGGATAGGAAGCTT GTTAAGCAGACAGTGATGACATCAGTTTACGGTGTCACATATATTGGTGCTCGTCAACAG ATAACAAAAAGACTACAAGAGAAAGGGCTCATTACAGATGACAAATTGTTGTATGAAGTG TCCTGCTATGCTACCAGGGTAACTTTGGATGCATTAGGACAAATGTTCCAGTCTGCCCGT GGTATAATGGCATGGCTTGGTGATTGTGCAAAGATGATTGCTTCAGAAAACCACCCTGTC AAATGGACGAGCCCCGTTGGTCTTCCGGTTGTTCAGCCCTACAAGAAATATAAGAACTAC ATGATTCGAACTTCACTGCAATGTCTGGCTTTACGACGGGAGGGAGATGCAATTGCACTC CAGCGGCAAAAGGCAGCTTTTCCCCCAAATTTTGTGCACTCTCTTGATAGTTCACACATG ATGATGACTGCTATTGCATGCAAAAAGGCTGGTCTTCATTTTGCAGGGGTGCATGACTCG TTTTGGGTGCATGCATGTGATGTTGATAAAATGAATCAGATACTGAGAGAACAATTTGTG GAGCTTTACAGCATGCCAATTCTTGAAAATTTGCTCAAGGAGTTCCAGACATCATTCCCA ACACTAGAATTTCCTCCCTGTCCTTCACAAGGGGACTTCGATGTGAGAGAAGTTCTTGCT TCAACCTACTTCTTCAACTAA

Peptide Sequence

PEP ID	Os06t0652000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26680169:26690049:1 gene:Os06g0652000 transcript:Os06t0652000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA POLYMERASE description:Similar to T3/T7-like RNA polymerase (Fragment). (Os06t0652000-01);Similar to DNA-directed RNA polymerase. (Os06t0652000-02)
Sequence	MLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIV MHKMMGLLMSSKDGVASVRVVQAAHCIGEAVEREFKVQTFFQKTRKKSAGENDLALEKEQ AKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQ TPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVT PKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRR VHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERC DTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKS GLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCL AACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADI YSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQ ITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHPV KWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHM MMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFP TLEFPPCPSQGDFDVREVLASTYFFN

Transcript Sequence

Transcript ID	Os06t0652000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26680169:26690049:1 gene:Os06g0652000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA POLYMERASE description:Similar to T3/T7-like RNA polymerase (Fragment). (Os06t0652000-01);Similar to DNA-directed RNA polymerase. (Os06t0652000-02)
Sequence	ACCGGGGTTTCAGATTTCTCTCTCTTCCTCTACCACCTCCGCCGCTGCTCGTCGTCACCG ACCTCCAAATCCGAACCAAAATTCTCTCGCCATTGCGGGGATTGGAGCTCCAAGGGATAA GCTCTGCCTGCCCTAGGCGCCGCATGCCTCTCCTCCTCTTCCCCATCTCCCCTCCCTGCG TGCCCCCGCCGACGAGTACCGGGAGCTCGAGCGGGAGATGCTCGACCGGAGGCTCGCGCC CGCGCTGCCCTACGTCAAGTCGCTCTTCCTCGGCTGGTTCGAGCCGCTGCGCGACGCCAT CGCCCGGGACCAGGAGGTGCAGCGGCGGAAGCGGGTCAAGCACGTCTACGCCAAGTACCT GCTCCTGCTGCCCGCGGACAAGGTGGCCGTCATCGTCATGCACAAGATGATGGGCCTCCT CATGTCGAGCAAGGATGGCGTCGCCAGCGTCCGTGTTGTCCAGGCCGCGCACTGCATCGG CGAGGCTGTTGAACGTGAGTTCAAAGTCCAGACATTCTTTCAAAAGACAAGGAAGAAAAG TGCAGGTGAAAATGATTTGGCATTAGAGAAGGAGCAGGCCAAATGCCGAAAACGTGTTAA GAGTTTGGTTAGGAGGAGAAAGTTGACTGAAGCACAGAAGATTGTGCAACAGGAGATTGA ATTGGAAGAATGGGGCACAGAATCCCAAGTGAAGTTAGGGACCCGCTTGATTGAGTTGTT ACTGGATTCAGCTTTTGTACAGTCACCAGCTGACCAAACACCAGAGAGTTCTCCAGATAT TCGACCAGCATTTAAACACGTACTTCGACAACCTATAGTAGAAAATGGGAGACTGAAGAA AAAGCACTGGGTGATAGAGTGTGACCCTCTTGTGCATGAGGGGTTTGAAAGCACTGCTAG GCACGTGGAGATACCCTATCTTCCTATGCTTGTGACTCCTAAAAAATGGAAGGGCTATGA TACAGGTGGGTACCTTTTTCTTCCCTCATATATTATGCGGACACATGGCGTGAAAGATCA AAAGGAAGCCATTAAGAGTGTTCCGAGAAAACAGCTACGGAAAGTATTTGAGGCATTAGA TACCCTTGGGAGTACTAAATGGAGGGTGAATAGAAGAGTACATAATGCTGTTGAAACTAT TTGGAGTCGAGGTGGGGGCATTGCAGGACTGGTTGATAAGGAAAATATTCCTCTACCTGA ACGACCAGAAACGGAGGATCCAGATGAAATACAGAAATGGAAGTGGAGCTTAAAGAAGGC AAAGAAAGCTAATCGTGAACTGCATGCTGAGCGATGCGATACAGAGCTTAAACTATCTGT TGCTCGGAAAATGAGAGAGGAGGATGGATTTTATTATCCCCATAATCTTGATTTTCGTGG CCGTGCATACCCTATGCATGCACATCTAAGCCACCTAGGTTCAGATCTATGCAGAGGTGT TCTAGAGTATGCTGAAGGGCGGCCACTAGGAAAGTCTGGCTTACGCTGGTTAAAGATTCA TTTGGCTAACAAATATGGTGGAGGAATTGAAAAGCTTTCTCATGAGGACAAGGTAGCATT TGTGGAGAACCAGTTGCCTGATATATTTGATTCAGCAACTAATCCTGTTGACGGGAATTG CTGGTGGATGAATGCTGAGGATCCTTTTCAATGTTTAGCCGCATGCATGGATCTTTCTGA TGCCTTAAAAAGTTCATCACCTCAGTGTGCTGTTTCTCACCTACCTATTCATCAGGATGG TTCATGCAATGGTTTACAACACTATGCTGCTCTTGGAAGAGACTATATGGGTGCAGCTGC TGTCAATTTAGTTCCTGGAGACAAACCTGCAGATATCTACTCAGAGATTGCTGCTAGGGT GCTGGATGTTGTTCGGGAAGACTCGATGGAGGATCCTGCAACTAATCCAACTGCCTCATT AGCAAGGGTTTTAGTCGATCAGGTGGATAGGAAGCTTGTTAAGCAGACAGTGATGACATC AGTTTACGGTGTCACATATATTGGTGCTCGTCAACAGATAACAAAAAGACTACAAGAGAA AGGGCTCATTACAGATGACAAATTGTTGTATGAAGTGTCCTGCTATGCTACCAGGGTAAC TTTGGATGCATTAGGACAAATGTTCCAGTCTGCCCGTGGTATAATGGCATGGCTTGGTGA TTGTGCAAAGATGATTGCTTCAGAAAACCACCCTGTCAAATGGACGAGCCCCGTTGGTCT TCCGGTTGTTCAGCCCTACAAGAAATATAAGAACTACATGATTCGAACTTCACTGCAATG TCTGGCTTTACGACGGGAGGGAGATGCAATTGCACTCCAGCGGCAAAAGGCAGCTTTTCC CCCAAATTTTGTGCACTCTCTTGATAGTTCACACATGATGATGACTGCTATTGCATGCAA AAAGGCTGGTCTTCATTTTGCAGGGGTGCATGACTCGTTTTGGGTGCATGCATGTGATGT TGATAAAATGAATCAGATACTGAGAGAACAATTTGTGGAGCTTTACAGCATGCCAATTCT TGAAAATTTGCTCAAGGAGTTCCAGACATCATTCCCAACACTAGAATTTCCTCCCTGTCC TTCACAAGGGGACTTCGATGTGAGAGAAGTTCTTGCTTCAACCTACTTCTTCAACTAAGC TTAATGGAAAAGTTTTGCACATTAGCACATACGCAGCAAGTCAGTAAGTTCGGCAGTAGC TGAATAGCCAGCCATATTGCTGATACCATGGTGATTTGGTGCCAAGTACGAAATGTGGCA TAAGCATCAGAGAAGAGCAACACACCGTTGCAACTGCTGGGAGCCTGGAACAGTATATGG GTTTTTGTCATTGGCAAATCAGTTCCCCAGATTGCCGATTTTGGAGGAAGCTAAAAAGTT CCAAGAAACCTGAGCTGAAACAAAACCCAGTACTTCCTGCTGATGTTTTTAGATTCATGC AGGATCTACTAGGATTTCAGTTCAGGGAATTCACCATGCTACACCCAGCCAATGAAGGCG ATTTTGCGACATAACAGGTTATCAACTACAGAATACTGATCGATACTAGTCCTGCTGACC ACCCTGACCAATTTGATCATAGGCGACAGTTGAACCATAATTTCACTGTCTATACATGTA ACATTATCTTTTGGCCTCTTAGGGCTATAATTATAGCCGATTGCTGTATCGGTGCGGTGA CCTGGTAATAATGTGTAGAATAAAGTGCCAAAGAGAAATGTATACTAGTGTACATGATTG CTGGATGCTGTTGATAGCAAGCAACCTGAAAGAGAGAAATGTACATGAAAACGGCTCGAT CTTGTCGATTCGTTCAAATATCTGCTTCCTTAGGTTCATTGCC