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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0651000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:26650225:26652370:-1 gene:Os06g0651000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dihydroflavonol 4-reductase, NADPH HC-toxin reductase description:Similar to Helminthosporium carbonum susceptibility1. (Os06t0651000-01)
Sequence

ATGGCGGAAGAGGGGAGGAGCGGCGGCGTCGCCGGAGACGGCGTCCGGGTGTGCGTCACC
GGAGGCGCCGGCTTCATCGCCTCGTGGCTCGTGAAGAAGCTCCTCGAGAGAGGCTGCATC
GTCCATGCCACGCTGCGAAGCATGGGAGATGAGGAGAAGGCCGGGCTGCTCCGGCGGCTC
GTCCCCGGCGCGGCGGAGCGGCTGCGGCTGTTCGAGGCCGATCTCTTCGACGCCGCCACC
TTCGCGCCGGCGATCGCCGGCTGCCAGTTCGTCTTCCTCATCGCCACGCCGTACGGGCTG
GAGGCCTCCAACTCCAAGTACAAGAACACGGCGGATGCGGCAGTGGACGCGGTGCGCGAG
ATCCTCCGGCAATGCGCGGAATCCAAGACGGTGAAGCGCGTCATCCACACCGCCTCGATA
TCCACCGCCTCGCCGTTGATCGACGTCCCCGGCGCCGGCGTCGGCGCCGCCGGGTACAGG
GACTTCATCGACGAGTCCTGCTGGACTCCGCTCGACGTCGACTACCCACTCCGGAGCGCC
CACTTCGACGTGATCTCTCCTCCTCTGTTCTTCCTCCTCCAATCAAGAACACGATGA

Peptide Sequence

PEP ID

Os06t0651000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:26650225:26652370:-1 gene:Os06g0651000 transcript:Os06t0651000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dihydroflavonol 4-reductase, NADPH HC-toxin reductase description:Similar to Helminthosporium carbonum susceptibility1. (Os06t0651000-01)
Sequence

MAEEGRSGGVAGDGVRVCVTGGAGFIASWLVKKLLERGCIVHATLRSMGDEEKAGLLRRL
VPGAAERLRLFEADLFDAATFAPAIAGCQFVFLIATPYGLEASNSKYKNTADAAVDAVRE
ILRQCAESKTVKRVIHTASISTASPLIDVPGAGVGAAGYRDFIDESCWTPLDVDYPLRSA
HFDVISPPLFFLLQSRTR

Transcript Sequence

Transcript ID

Os06t0651000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:26650225:26652370:-1 gene:Os06g0651000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dihydroflavonol 4-reductase, NADPH HC-toxin reductase description:Similar to Helminthosporium carbonum susceptibility1. (Os06t0651000-01)
Sequence

ACCTGGCACTCGGGCGGCGGCGGCAATGGCGGAAGAGGGGAGGAGCGGCGGCGTCGCCGG
AGACGGCGTCCGGGTGTGCGTCACCGGAGGCGCCGGCTTCATCGCCTCGTGGCTCGTGAA
GAAGCTCCTCGAGAGAGGCTGCATCGTCCATGCCACGCTGCGAAGCATGGGAGATGAGGA
GAAGGCCGGGCTGCTCCGGCGGCTCGTCCCCGGCGCGGCGGAGCGGCTGCGGCTGTTCGA
GGCCGATCTCTTCGACGCCGCCACCTTCGCGCCGGCGATCGCCGGCTGCCAGTTCGTCTT
CCTCATCGCCACGCCGTACGGGCTGGAGGCCTCCAACTCCAAGTACAAGAACACGGCGGA
TGCGGCAGTGGACGCGGTGCGCGAGATCCTCCGGCAATGCGCGGAATCCAAGACGGTGAA
GCGCGTCATCCACACCGCCTCGATATCCACCGCCTCGCCGTTGATCGACGTCCCCGGCGC
CGGCGTCGGCGCCGCCGGGTACAGGGACTTCATCGACGAGTCCTGCTGGACTCCGCTCGA
CGTCGACTACCCACTCCGGAGCGCCCACTTCGACGTGATCTCTCCTCCTCTGTTCTTCCT
CCTCCAATCAAGAACACGATGAAGCAAAAAACAGAAGAAACCAAATTAAACATTGTTTTG
CAGAAGTACGTGCTGTCGAAGATGATGTCGGAGAAGGAGCTCCTGGGCTACAACGACGGC
GAGGGCCGGGCGTTCGAGGTGGTCACCCTGCCGTGCGGCCTCGTCGCCGGCGACACGGTC
CTCGGCCGCGCCCCGGAGACGCTGGAGAACGCCGTGTCGCCGGTGTCCCGGAACGAGCCG
TCCTTCGCGTTCCTGAGGCTGCTGCAGAGGCTGGTCGGGTCGGTGCCGCTGGTGCACGCC
GACGACGTCTGCGACGCGCTCGTCTTCTGCATGGATCAGCCGTCGCTCGCCGGCCGCTTC
CTCTGCTCCGCCGCCTACCCGACCATCCACGACATCGTCGAACACTTCGCCGCCAAGTAC
CCTCACCTCGACGTCCTCAAAGAGCCGGAGAGGGAGGTGGCGAGGGTGCAGCCGGCGGCA
GACAAGCTGGGTGAGCTGGGGTTCAGGTACAAGTACGGCATGGAGGAGATACTCGACGGC
AGCGTCGGCTGCGCGGCGAGGCTGGGTTACATCGACGCAGCCAAGCTCAGGCCGCAGGAA
GGATGAATCTGCTACAGATTTGCAGGATGAAGAAGATGGATGATATTTGTTCGGTTTTGA
ACAAGTTTTTGGTGTTTGTTTGTAATCTCATGTGTTCTGAATACCTCTCTCATGTATCAC
ATGACGCATTTCTGCGTCAGAGAACGATATTAATAAGTACTCCGTGGAGCTCGCTAGGCA
CTTGAGTT