Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0649900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26575128:26579581:-1 gene:Os06g0649900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D varphi description:Phospholipase D/Transphosphatidylase domain containing protein. (Os06t0649900-01)
Sequence	ATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGT GCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCC ATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTG CTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAG TTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATG GTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGAT CGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAG AGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGAT TGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTAT ATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTAT TTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAA CTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCT TTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCT CTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAA ATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTG AGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAG GGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATG GACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCA GCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGG ACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTC TGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTT CCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTAC CCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATC GGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACA TACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCA TACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAA

Peptide Sequence

PEP ID	Os06t0649900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26575128:26579581:-1 gene:Os06g0649900 transcript:Os06t0649900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D varphi description:Phospholipase D/Transphosphatidylase domain containing protein. (Os06t0649900-01)
Sequence	MRSSARGRGRLLLLLLLAAGAPAAPAAAEVATCKAWLVQSIPTDMPHLRRVPGVLSTADV LQWLSGNATKSLDVLAQYWQFLAQPKNPKSGDYGYSESEMVRFGADKGQRVYKALEKAAD RKIKIRIVQHSGFAPDFDKESADLAAGRPNVQNVTLLFGDWWGSGVVHAKVWISDKKDVY IGSANNDWKSLSQVKELGIYFADCPQIAKTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQA FRKVPCWSHFLKPEERCRSPLPPSVDVPYVDGYPSLANPKMLDFSFETPGYKSSTKEHHL SYLSYAPPELSFDKFQADEQGWLDTIKSVKFGGVVRISTMDWLGQSQYATQTVFWPSLSS AISEVIFSKNATVRILVAYWTHFIPNTEKYLKSLLYSNILCTSSSYNHCMGKVEIKYYVV PGYNKTGPALAQGAATGNRYPDFTRVNHGKYAVSDVRANIGTSNLIWDYFYTTAGVSFGT YSPAIVSQLQDIFDADWFSPYTVPVKPLEASA

Transcript Sequence

Transcript ID	Os06t0649900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26575128:26579581:-1 gene:Os06g0649900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D varphi description:Phospholipase D/Transphosphatidylase domain containing protein. (Os06t0649900-01)
Sequence	AGTGGTGGTGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCA GAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCC TGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCA CCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCC CCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCC TGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCG ATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTT ATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTG GATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTAC AAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGT GGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTA GTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGG AAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAG TTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAA AACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATG GCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATA AGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCAT TTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCG GGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAA CAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAA CTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGA AGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCA AGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGC AAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACG CCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACA CCACAGCCGGTGTCAGCTTCGGAACATACAGCCCCGCCATTGTTTCGCAGCTGCAGGATA TCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTG CATAATATCAGGTGATCATTTCAGTTAGGAGTAGGTCTTTTTTCACTTATTGCCAATAAA GAACGTCACGGAGTGAGCTGGACAGTTGCAGGACAGAAACGCCATTCAACAGGAGATCAC ATGCATCAACAACATTAGGAGTTTCACTGCTCGTTTTTGTCAAGAATCTGCAGATATTTT TTTTTCGTTTCTCCAATAAGTTAGTTTACAGAAATTTTACTTCCCAGATGAGAAGTGTAA ACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTA ATCAATTTGAGAGCATCGAGTTTATTC