Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0644600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:26303837:26312412:1 gene:Os06g0644600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-131 description:Similar to predicted protein. (Os06t0644600-01)
Sequence

ATGGGGATCTTCGAGCCGTTCCGCGCCATCGGGTACATCACGGCCGGCGGCGTGCCCTTC
TCCGTGCAGCGCCTCGGCACCGAGACCTTCGTCGCCGTCAGCGTCGGCAAGGCCTTCCAC
GTCTACAACTGTGCTAAACTGAATTTGGTCCTTTCTGGACCTCAATTGCCCAAGAAGATC
CGTGCTCTTGCATCGTACAAGGATTATACATTTGCTGCGTATGGAAGTGATATCGCTGTT
TTCAAACGAACTGATCAGGTGGTTACTTGGAGCAAACATGAAGAAAAGATCAATATATTA
TACCCATTTGGAGAATACATTCTAAGTGCAGATATTAAGGGGAATGTATTTATATGGTCC
TTCAGAGGATCAGAGCCAAATAGTGAGCCTGTTGGGAACATATCATTGGGAGACAAGTTT
ACACCAACTTGCATTATGCATCCTGATACTTATCTAAATAAGGTCATCATTGGAAGCGAA
GAGGGTCCCTTGCAGCTTTGGAATATCAGCACTAAGAAGAAACTTTATGAGTTTAAGGGT
TGGAACTCATCAGTATGTTGTTGTGTTTCTTCACCTGCCCTTGATGTTGTTGCAGTCGGA
TGTTCTGATGGAACAATTCATGTTCATAATATACGATATGATGAAGAGTTGATGTCTTTC
AATCATCAAATTCGTGGTGCTGTGACTGCATTGTCATTTCGAACAGATGGGCAACCTCTT
CTGGCCTCTGGAGGATCGTCAGGTGTTATTAGTATATGGAATCTTGAGAAAAGGCGCCTT
CATTCTGTTATCCGGGAGGCCCATGATGCTTCTATAGTTTCACTTCATTTTTTCGCGAAT
GAGCCTATTTTGATGAGCTCGGCTTCTGATAATTCAATAAAGATGTGGATATTTGATACT
AATGATGGAGATGCTCGTTTGTTACGATTTCGAAGTGGCCATAGTGCTCCACCACGGTGC
ATTAGATTCTACGGCAATGGAAAATGCATCTTATCTGCTGGTCAAGATCGTGCCTTTCGC
CTTTTTTCAGTTGTCCAGGATCAACAAAGCAGAGAACTTTCTCAAAGACATGTGTCAAAA
AGGGCAAAAAAGCTTGGATTAAAGGAGGAAGAGATCAAGCTGAAACCAGTTATTGCATTT
GATTGTGCTGAGATACGCTCACGTGATTGGTGTAACGTTGTTACCTGCCATACGGATACT
CCACAAGCGTATGTATGGCGTCTACAGAACTTTGTCATTGGGGAGCATATTCTGACACCG
TCATCAGGCAGCAAGTCACCAATTAAGGCTTGTGCAATAAGTGCATGTGGAAATTTTACT
TTCTTGGGCACTGAAGGTGGCTGGATCGAAAAATTTAACCTGCAATCGGGGATTAGTCGT
GGCAGTTATATTGATACATCGTTGGCAATTAAGCGTGCACATGACGGAGAAGTTGTTGGA
TTAGCGTGTGATGCTACAAATGGCTCTCTTATTAGTGCTGGATACGGTGGTGATATTAAG
GTTTGGGATTTTAAAAGTTGCAAGCTAAAATCCAGACTGGATATTGGTAAATCTGTCACC
AAGATTGCATACCACCGGGCAAATGGTCTTCTTGCTACTGTAGCAGATGATATGGTGCTT
ATATTGTTTGATACAGTAGCAATGAAAATGGTCCGTAGATTCGAAGGCCATACGGACCGT
GTTACTGATTTGTGTTTCAGTGAGGATGGAAAATGGCTCATCTCATCGAGTATGGATGGG
ACTCTTAGAATATGGGATATCAGTTTAGCAAGGCAGATTGATGCAATGCATGTCGATGTA
TCTATAACATCTCTCTCTATGTCTCCTAATATGGATGTGTTGGCAACCACCCATGTTGAT
CAAAATGGTGTCTATCTTTGGGTTAATCAAGCTTTGTTCTCACCATCAACAAATGTTGAT
AATTATTCAAGTGGTAAACATGTCAGAAATGTGCGTTTGCCCACTGTTTCATCAACAGAA
AAATCTGAGGAAGAGCCCATTCATAGTTCAGAAGATTCAAAAGAAAGTAAAGTTAAACCT
TATGTTATAATGGATCACCAAATACCAAATATGATCACCCTCTCTTTGCTTCCCAAGAGT
CAATGGCAAAGTCTGGCGAATCTTGACATTATAAAGGTTCGGAATAAACCAATTGAGCCA
CCAAAGAAACCTGAGAAGGCGCCTTTTTTCTTGCCCACAGTTCCATCCCTTTCGGGGGAG
ATATTATTTGAGCCTGCGGCGAACAGTAAAGAAACAGACAGCAGTACTGAGGACACAAGT
CACAAAAAAATGGCTGACCTCTCCTCTCACTTTAGTCGGCTGTTACAATCCTGTGGAGAT
ACAAAGAATTATTCGGCATTTACTGACTACCTAAAAGGCTTATCACCATCATCTTTAGAT
ATGGAACTACGAGTGCTACAGTTAATCGATGATGAGCCACAAAATTTGGAGCAGAGACCT
GAACTTCAATCCATTTCATTGCTGTTGGACTACTTCATACATGAGCTTTCCTGCAGGAAT
AACTTTGAGTTTGTTCAGGCTGTTCTCAAATTGTTTTTGAAGATACATGGTGAAACGATA
CGGCGTCACTCAATGCTTCAGGACAAAGTGAAGAAGCTTCTAGATGTCCAGAGCTTAGTT
TGGCAGAAGATAGACAAAGTGTTTCAGAGTGCACGATGCATGGTTACATTCCTCAGCAAC
TCACAGTTTTAG

Peptide Sequence

PEP ID

Os06t0644600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:26303837:26312412:1 gene:Os06g0644600 transcript:Os06t0644600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-131 description:Similar to predicted protein. (Os06t0644600-01)
Sequence

MGIFEPFRAIGYITAGGVPFSVQRLGTETFVAVSVGKAFHVYNCAKLNLVLSGPQLPKKI
RALASYKDYTFAAYGSDIAVFKRTDQVVTWSKHEEKINILYPFGEYILSADIKGNVFIWS
FRGSEPNSEPVGNISLGDKFTPTCIMHPDTYLNKVIIGSEEGPLQLWNISTKKKLYEFKG
WNSSVCCCVSSPALDVVAVGCSDGTIHVHNIRYDEELMSFNHQIRGAVTALSFRTDGQPL
LASGGSSGVISIWNLEKRRLHSVIREAHDASIVSLHFFANEPILMSSASDNSIKMWIFDT
NDGDARLLRFRSGHSAPPRCIRFYGNGKCILSAGQDRAFRLFSVVQDQQSRELSQRHVSK
RAKKLGLKEEEIKLKPVIAFDCAEIRSRDWCNVVTCHTDTPQAYVWRLQNFVIGEHILTP
SSGSKSPIKACAISACGNFTFLGTEGGWIEKFNLQSGISRGSYIDTSLAIKRAHDGEVVG
LACDATNGSLISAGYGGDIKVWDFKSCKLKSRLDIGKSVTKIAYHRANGLLATVADDMVL
ILFDTVAMKMVRRFEGHTDRVTDLCFSEDGKWLISSSMDGTLRIWDISLARQIDAMHVDV
SITSLSMSPNMDVLATTHVDQNGVYLWVNQALFSPSTNVDNYSSGKHVRNVRLPTVSSTE
KSEEEPIHSSEDSKESKVKPYVIMDHQIPNMITLSLLPKSQWQSLANLDIIKVRNKPIEP
PKKPEKAPFFLPTVPSLSGEILFEPAANSKETDSSTEDTSHKKMADLSSHFSRLLQSCGD
TKNYSAFTDYLKGLSPSSLDMELRVLQLIDDEPQNLEQRPELQSISLLLDYFIHELSCRN
NFEFVQAVLKLFLKIHGETIRRHSMLQDKVKKLLDVQSLVWQKIDKVFQSARCMVTFLSN
SQF

Transcript Sequence

Transcript ID

Os06t0644600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:26303837:26312412:1 gene:Os06g0644600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-131 description:Similar to predicted protein. (Os06t0644600-01)
Sequence

GAGCGGCCAAACCCTCGACAAGCATCGTCAGCAGCAGCAGCCGCCGGAGAAGTAACCGCC
GCCGCCGCGGTGGGAGAGAGAGAGAGAGGGAGATGGGGATCTTCGAGCCGTTCCGCGCCA
TCGGGTACATCACGGCCGGCGGCGTGCCCTTCTCCGTGCAGCGCCTCGGCACCGAGACCT
TCGTCGCCGTCAGCGTCGGCAAGGCCTTCCACGTCTACAACTGTGCTAAACTGAATTTGG
TCCTTTCTGGACCTCAATTGCCCAAGAAGATCCGTGCTCTTGCATCGTACAAGGATTATA
CATTTGCTGCGTATGGAAGTGATATCGCTGTTTTCAAACGAACTGATCAGGTGGTTACTT
GGAGCAAACATGAAGAAAAGATCAATATATTATACCCATTTGGAGAATACATTCTAAGTG
CAGATATTAAGGGGAATGTATTTATATGGTCCTTCAGAGGATCAGAGCCAAATAGTGAGC
CTGTTGGGAACATATCATTGGGAGACAAGTTTACACCAACTTGCATTATGCATCCTGATA
CTTATCTAAATAAGGTCATCATTGGAAGCGAAGAGGGTCCCTTGCAGCTTTGGAATATCA
GCACTAAGAAGAAACTTTATGAGTTTAAGGGTTGGAACTCATCAGTATGTTGTTGTGTTT
CTTCACCTGCCCTTGATGTTGTTGCAGTCGGATGTTCTGATGGAACAATTCATGTTCATA
ATATACGATATGATGAAGAGTTGATGTCTTTCAATCATCAAATTCGTGGTGCTGTGACTG
CATTGTCATTTCGAACAGATGGGCAACCTCTTCTGGCCTCTGGAGGATCGTCAGGTGTTA
TTAGTATATGGAATCTTGAGAAAAGGCGCCTTCATTCTGTTATCCGGGAGGCCCATGATG
CTTCTATAGTTTCACTTCATTTTTTCGCGAATGAGCCTATTTTGATGAGCTCGGCTTCTG
ATAATTCAATAAAGATGTGGATATTTGATACTAATGATGGAGATGCTCGTTTGTTACGAT
TTCGAAGTGGCCATAGTGCTCCACCACGGTGCATTAGATTCTACGGCAATGGAAAATGCA
TCTTATCTGCTGGTCAAGATCGTGCCTTTCGCCTTTTTTCAGTTGTCCAGGATCAACAAA
GCAGAGAACTTTCTCAAAGACATGTGTCAAAAAGGGCAAAAAAGCTTGGATTAAAGGAGG
AAGAGATCAAGCTGAAACCAGTTATTGCATTTGATTGTGCTGAGATACGCTCACGTGATT
GGTGTAACGTTGTTACCTGCCATACGGATACTCCACAAGCGTATGTATGGCGTCTACAGA
ACTTTGTCATTGGGGAGCATATTCTGACACCGTCATCAGGCAGCAAGTCACCAATTAAGG
CTTGTGCAATAAGTGCATGTGGAAATTTTACTTTCTTGGGCACTGAAGGTGGCTGGATCG
AAAAATTTAACCTGCAATCGGGGATTAGTCGTGGCAGTTATATTGATACATCGTTGGCAA
TTAAGCGTGCACATGACGGAGAAGTTGTTGGATTAGCGTGTGATGCTACAAATGGCTCTC
TTATTAGTGCTGGATACGGTGGTGATATTAAGGTTTGGGATTTTAAAAGTTGCAAGCTAA
AATCCAGACTGGATATTGGTAAATCTGTCACCAAGATTGCATACCACCGGGCAAATGGTC
TTCTTGCTACTGTAGCAGATGATATGGTGCTTATATTGTTTGATACAGTAGCAATGAAAA
TGGTCCGTAGATTCGAAGGCCATACGGACCGTGTTACTGATTTGTGTTTCAGTGAGGATG
GAAAATGGCTCATCTCATCGAGTATGGATGGGACTCTTAGAATATGGGATATCAGTTTAG
CAAGGCAGATTGATGCAATGCATGTCGATGTATCTATAACATCTCTCTCTATGTCTCCTA
ATATGGATGTGTTGGCAACCACCCATGTTGATCAAAATGGTGTCTATCTTTGGGTTAATC
AAGCTTTGTTCTCACCATCAACAAATGTTGATAATTATTCAAGTGGTAAACATGTCAGAA
ATGTGCGTTTGCCCACTGTTTCATCAACAGAAAAATCTGAGGAAGAGCCCATTCATAGTT
CAGAAGATTCAAAAGAAAGTAAAGTTAAACCTTATGTTATAATGGATCACCAAATACCAA
ATATGATCACCCTCTCTTTGCTTCCCAAGAGTCAATGGCAAAGTCTGGCGAATCTTGACA
TTATAAAGGTTCGGAATAAACCAATTGAGCCACCAAAGAAACCTGAGAAGGCGCCTTTTT
TCTTGCCCACAGTTCCATCCCTTTCGGGGGAGATATTATTTGAGCCTGCGGCGAACAGTA
AAGAAACAGACAGCAGTACTGAGGACACAAGTCACAAAAAAATGGCTGACCTCTCCTCTC
ACTTTAGTCGGCTGTTACAATCCTGTGGAGATACAAAGAATTATTCGGCATTTACTGACT
ACCTAAAAGGCTTATCACCATCATCTTTAGATATGGAACTACGAGTGCTACAGTTAATCG
ATGATGAGCCACAAAATTTGGAGCAGAGACCTGAACTTCAATCCATTTCATTGCTGTTGG
ACTACTTCATACATGAGCTTTCCTGCAGGAATAACTTTGAGTTTGTTCAGGCTGTTCTCA
AATTGTTTTTGAAGATACATGGTGAAACGATACGGCGTCACTCAATGCTTCAGGACAAAG
TGAAGAAGCTTCTAGATGTCCAGAGCTTAGTTTGGCAGAAGATAGACAAAGTGTTTCAGA
GTGCACGATGCATGGTTACATTCCTCAGCAACTCACAGTTTTAGTAGCAGGTTGGTGTGG
GGCTTCTTTGTGGCTGCTGTACCATTCTCTTCTGTCTTACCATACCGTCTGTCATGGACT
CAGGGATTCAGGGTAAAGCTACAAGGCGTCTGCGTGCTGTTAACAACGATATGCACCAGC
AGTACTTCAGGATCATGAGACAACAATTTTGTAGTTCTGTTATTTATTGTTGCATTCTTT
TGTAACATATTGAATTACTGATGTATCGACACCGTTTTGCAACAAAAAAGAAAAGGAATG
TCATGATTGATATTTTAATTTTTGGTGGGTGCTATAGCATTCAGCAAAACTATCGTGACA
GACTTTTGATTTCT