Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0644200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26272898:26278664:1 gene:Os06g0644200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 1, V-PPase 1, class I V-PPase, vacuolar H-translocating inorganic pyrophosphatase 1 description:Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Vacuolar H+-pyrophosphatase). (Os06t0644200-01);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-02);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-03)
Sequence	ATGAATCCTAGCGCGAGGATCTCGCAGGTAGCAATGGCGGCGATACTGCCGGACCTGGCG ACGCAGGTGCTGGTCCCGGCGGCGGCCGTGGTCGGCATCGCGTTCGCGGTGGTGCAGTGG GTGCTGGTGTCCAAGGTGAAGATGACCGCGGAGCGGCGCGGCGGGGAGGGGTCCCCCGGC GCGGCCGCCGGGAAGGACGGCGGCGCCGCCAGCGAGTACCTCATCGAGGAGGAGGAGGGG CTCAACGAGCACAACGTCGTCGAGAAGTGCTCCGAGATCCAGCACGCCATCTCCGAAGGA GCAACTTCTTTCCTCTTCACTGAATACAAGTATGTTGGACTATTCATGGGCATTTTCGCG GTCCTGATCTTCCTCTTCCTTGGATCTGTTGAGGGATTCAGCACAAAGAGTCAACCTTGC CACTACAGCAAGGATAGGATGTGCAAGCCTGCCCTTGCAAATGCTATCTTCAGTACTGTT GCCTTTGTGCTTGGTGCAGTCACCTCTCTTGTATCTGGTTTCCTTGGAATGAAGATTGCA ACTTATGCAAATGCCAGGACAACCCTTGAGGCAAGGAAGGGTGTTGGGAAGGCATTCATT ACTGCTTTCCGCTCTGGTGCTGTCATGGGTTTCCTGCTTGCTGCAAGTGGCCTTGTTGTT CTTTACATTGCCATCAACTTGTTCGGAATTTATTATGGTGATGACTGGGAAGGTCTTTTT GAGGCTATCACTGGGTATGGTCTTGGTGGTTCTTCTATGGCCCTATTTGGCCGTGTAGGT GGCGGTATTTACACGAAAGCTGCTGATGTTGGTGCTGACCTAGTTGGGAAAGTAGAAAGG AATATCCCTGAAGATGACCCAAGAAACCCAGCTGTCATTGCAGATAATGTTGGTGACAAT GTTGGAGATATTGCTGGAATGGGGTCAGATCTCTTTGGTTCCTATGCTGAGTCATCTTGT GCTGCTCTTGTCGTTGCTTCAATCTCTTCTTTTGGAATTAACCATGAATTCACTCCTATG CTGTACCCGCTCCTGATTAGCTCAGTTGGTATCATTGCTTGTCTGATAACCACACTTTTC GCCACTGATTTTTTTGAGATCAAGGCTGTTGATGAAATTGAGCCTGCCCTCAAGAAGCAA CTTATAATTTCCACCGTTGTGATGACGGTTGGCATTGCACTTGTCAGTTGGTTAGGCCTC CCATATTCCTTCACAATATTCAACTTTGGTGCCCAGAAGACTGTGTATAACTGGCAACTT TTCTTGTGTGTGGCGGTTGGTCTTTGGGCTGGACTAATCATCGGATTTGTGACAGAGTAT TACACAAGCAACGCCTACAGCCCTGTCCAAGACGTTGCTGATTCCTGCAGAACCGGAGCT GCTACTAATGTCATCTTTGGCCTTGCTCTGGGATACAAATCTGTCATTATTCCTATTTTT GCTATTGCTTTTAGTATTTTCCTCAGCTTCAGCCTTGCCGCAATGTACGGTGTAGCTGTG GCTGCCCTTGGAATGCTTAGCACAATTGCAACTGGTCTTGCCATTGATGCCTATGGCCCT ATCAGTGACAATGCTGGAGGAATTGCTGAGATGGCTGGCATGAGTCACAGAATTCGTGAG AGAACTGATGCTCTGGATGCTGCAGGAAACACCACTGCTGCCATCGGGAAGGGTTTCGCC ATTGGCTCGGCAGCCTTGGTGTCTCTTGCCCTCTTTGGTGCCTTTGTGAGCCGTGCCGCC ATCTCCACTGTCGATGTTCTGACACCTAAAGTTTTCATTGGACTGATTGTTGGTGCTATG CTCCCATACTGGTTCTCTGCTATGACCATGAAGAGTGTTGGCAGCGCAGCGCTCAAGATG GTGGAGGAAGTCCGTAGGCAGTTCAACTCCATCCCTGGGCTCATGGAGGGCACAACCAAG CCTGACTACGCAACCTGTGTGAAGATCTCCACTGATGCATCCATCAAGGAGATGATTCCC CCAGGTGCTCTTGTCATGCTCAGCCCTCTCATTGTTGGGATCTTCTTTGGTGTCGAGACC CTCTCAGGACTACTTGCTGGTGCTCTCGTTTCTGGTGTTCAGATTGCCATCTCTGCATCA AACACTGGTGGTGCCTGGGACAACGCAAAGAAGTACATTGAGGCTGGTGCATCTGAGCAT GCAAGGACCCTGGGCCCGAAAGGCTCAGACTGCCACAAGGCTGCTGTGATCGGCGACACC ATTGGGGATCCTCTCAAGGACACCTCAGGCCCCTCGCTCAACATCCTCATCAAGCTGATG GCTGTCGAGTCGCTCGTGTTTGCCCCGTTCTTCGCCACCCATGGAGGCATCCTCTTCAAG TGGTTTTAG

Peptide Sequence

PEP ID	Os06t0644200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26272898:26278664:1 gene:Os06g0644200 transcript:Os06t0644200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 1, V-PPase 1, class I V-PPase, vacuolar H-translocating inorganic pyrophosphatase 1 description:Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Vacuolar H+-pyrophosphatase). (Os06t0644200-01);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-02);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-03)
Sequence	MNPSARISQVAMAAILPDLATQVLVPAAAVVGIAFAVVQWVLVSKVKMTAERRGGEGSPG AAAGKDGGAASEYLIEEEEGLNEHNVVEKCSEIQHAISEGATSFLFTEYKYVGLFMGIFA VLIFLFLGSVEGFSTKSQPCHYSKDRMCKPALANAIFSTVAFVLGAVTSLVSGFLGMKIA TYANARTTLEARKGVGKAFITAFRSGAVMGFLLAASGLVVLYIAINLFGIYYGDDWEGLF EAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDN VGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTPMLYPLLISSVGIIACLITTLF ATDFFEIKAVDEIEPALKKQLIISTVVMTVGIALVSWLGLPYSFTIFNFGAQKTVYNWQL FLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIF AIAFSIFLSFSLAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRE RTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAM LPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGTTKPDYATCVKISTDASIKEMIP PGALVMLSPLIVGIFFGVETLSGLLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEH ARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGILFK WF

Transcript Sequence

Transcript ID	Os06t0644200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26272898:26278664:1 gene:Os06g0644200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-pyrophosphatase 1, V-PPase 1, class I V-PPase, vacuolar H-translocating inorganic pyrophosphatase 1 description:Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Vacuolar H+-pyrophosphatase). (Os06t0644200-01);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-02);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-03)
Sequence	TCTCCTCTCCTCCTCCTCTTCGCGTCGAATCCTCCTCCGAGAAGAGGAGAGTACATGAAT CCTAGCGCGAGGATCTCGCAGGTAGCAATGGCGGCGATACTGCCGGACCTGGCGACGCAG GTGCTGGTCCCGGCGGCGGCCGTGGTCGGCATCGCGTTCGCGGTGGTGCAGTGGGTGCTG GTGTCCAAGGTGAAGATGACCGCGGAGCGGCGCGGCGGGGAGGGGTCCCCCGGCGCGGCC GCCGGGAAGGACGGCGGCGCCGCCAGCGAGTACCTCATCGAGGAGGAGGAGGGGCTCAAC GAGCACAACGTCGTCGAGAAGTGCTCCGAGATCCAGCACGCCATCTCCGAAGGAGCAACT TCTTTCCTCTTCACTGAATACAAGTATGTTGGACTATTCATGGGCATTTTCGCGGTCCTG ATCTTCCTCTTCCTTGGATCTGTTGAGGGATTCAGCACAAAGAGTCAACCTTGCCACTAC AGCAAGGATAGGATGTGCAAGCCTGCCCTTGCAAATGCTATCTTCAGTACTGTTGCCTTT GTGCTTGGTGCAGTCACCTCTCTTGTATCTGGTTTCCTTGGAATGAAGATTGCAACTTAT GCAAATGCCAGGACAACCCTTGAGGCAAGGAAGGGTGTTGGGAAGGCATTCATTACTGCT TTCCGCTCTGGTGCTGTCATGGGTTTCCTGCTTGCTGCAAGTGGCCTTGTTGTTCTTTAC ATTGCCATCAACTTGTTCGGAATTTATTATGGTGATGACTGGGAAGGTCTTTTTGAGGCT ATCACTGGGTATGGTCTTGGTGGTTCTTCTATGGCCCTATTTGGCCGTGTAGGTGGCGGT ATTTACACGAAAGCTGCTGATGTTGGTGCTGACCTAGTTGGGAAAGTAGAAAGGAATATC CCTGAAGATGACCCAAGAAACCCAGCTGTCATTGCAGATAATGTTGGTGACAATGTTGGA GATATTGCTGGAATGGGGTCAGATCTCTTTGGTTCCTATGCTGAGTCATCTTGTGCTGCT CTTGTCGTTGCTTCAATCTCTTCTTTTGGAATTAACCATGAATTCACTCCTATGCTGTAC CCGCTCCTGATTAGCTCAGTTGGTATCATTGCTTGTCTGATAACCACACTTTTCGCCACT GATTTTTTTGAGATCAAGGCTGTTGATGAAATTGAGCCTGCCCTCAAGAAGCAACTTATA ATTTCCACCGTTGTGATGACGGTTGGCATTGCACTTGTCAGTTGGTTAGGCCTCCCATAT TCCTTCACAATATTCAACTTTGGTGCCCAGAAGACTGTGTATAACTGGCAACTTTTCTTG TGTGTGGCGGTTGGTCTTTGGGCTGGACTAATCATCGGATTTGTGACAGAGTATTACACA AGCAACGCCTACAGCCCTGTCCAAGACGTTGCTGATTCCTGCAGAACCGGAGCTGCTACT AATGTCATCTTTGGCCTTGCTCTGGGATACAAATCTGTCATTATTCCTATTTTTGCTATT GCTTTTAGTATTTTCCTCAGCTTCAGCCTTGCCGCAATGTACGGTGTAGCTGTGGCTGCC CTTGGAATGCTTAGCACAATTGCAACTGGTCTTGCCATTGATGCCTATGGCCCTATCAGT GACAATGCTGGAGGAATTGCTGAGATGGCTGGCATGAGTCACAGAATTCGTGAGAGAACT GATGCTCTGGATGCTGCAGGAAACACCACTGCTGCCATCGGGAAGGGTTTCGCCATTGGC TCGGCAGCCTTGGTGTCTCTTGCCCTCTTTGGTGCCTTTGTGAGCCGTGCCGCCATCTCC ACTGTCGATGTTCTGACACCTAAAGTTTTCATTGGACTGATTGTTGGTGCTATGCTCCCA TACTGGTTCTCTGCTATGACCATGAAGAGTGTTGGCAGCGCAGCGCTCAAGATGGTGGAG GAAGTCCGTAGGCAGTTCAACTCCATCCCTGGGCTCATGGAGGGCACAACCAAGCCTGAC TACGCAACCTGTGTGAAGATCTCCACTGATGCATCCATCAAGGAGATGATTCCCCCAGGT GCTCTTGTCATGCTCAGCCCTCTCATTGTTGGGATCTTCTTTGGTGTCGAGACCCTCTCA GGACTACTTGCTGGTGCTCTCGTTTCTGGTGTTCAGATTGCCATCTCTGCATCAAACACT GGTGGTGCCTGGGACAACGCAAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCAAGG ACCCTGGGCCCGAAAGGCTCAGACTGCCACAAGGCTGCTGTGATCGGCGACACCATTGGG GATCCTCTCAAGGACACCTCAGGCCCCTCGCTCAACATCCTCATCAAGCTGATGGCTGTC GAGTCGCTCGTGTTTGCCCCGTTCTTCGCCACCCATGGAGGCATCCTCTTCAAGTGGTTT TAGATGGTGACGATAGATTTACGAGGACGTTATTTTTGCCAGGAGGGCGCTGGAAATCAT CCATATATTATAGAGTTCATCGAGTTGACACATATAGTTCCCTCCGTTTCCTATTTGTTA TTACTGTCTGTCCATCAGTCGATCATGCTAAGCTTATTAGCATCATACCTGTGTCTAGTT TTTTTGAGTCTGGTAGTTGTAGCCGATGGGAGCAAATCACTGGCCACCTACAGGTTTGGA CAAGAGTACCTTGAATTTGCGTTTTCCTGTAGGTTGGATGATACGATGATGGTGATGATT ATTGTACGTGCACGGAATGCACCTGTCTCAGTGAAATTTTCCCGGGAAGGTTCTGCTGTT TCTTTATGTCCTTGTGGGAATGTTAGGATGATCTTGTACAAAAAAGAAAACAACTCTAGT GATAGGGGGTGGAGTACATGTGTGCCAACTAAGTTTGAGTTGTCTTGAATTATTGAAGTA AAATACTTTAGCTAAAATGACGTAGTAGTGCGTGTGCTTGCTTTTGTTTTAAGATAGAGA ATTATAGTATTATTTTGTATACTATATTTTCCTCCTTTCTTGCTTCGTTCGTTTCATATT ATAAGACTTTCTAGCAGACTCACATTCATATATATGGTAATGAATCTAAATATATATGTG TGCCTAGATCCATTAATAACTATATGAATGTGGGCAATGCTAGAAAGTTTTATAATATGA AACGGAGGTAATAATATGAAATGGAGGCAGTATCTTATATTTTCTTTATCCTAAATAAAT AAATCTAAATTTCTGG