Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0643700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:26235069:26238193:-1 gene:Os06g0643700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADIPOR1 description:Hly-III related domain containing protein. (Os06t0643700-01)
Sequence

ATGGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCG
GCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAG
AGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATG
AAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTC
CTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTC
GTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGAT
CTCATCGGACACCTCTCCTGGCCAATCTCAAAGGTTGCTGAAAATGTCTCCAGTAACATT
GGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCGAGCCCGGCGTCGAGCGCCGGC
GCCATGGCGGCGGCGTGGCCGGTGACGGCGGCGGCGGCGGCGACGACGCGGTGGCCGTTC
TTCGTGTTCCTCGCGGGCGCCATGTTCTGCCTGCTGAGCAGCGCGGCGTGCCACCTCCTG
TCGTGCCACTCGCACCGCCTCAACCTGTTCCTCATCCGCCTCGACTACACCGGCATCGCC
GTCATGATCGTCGTCTCCTTCTTCCCGCCCATCTACTACATCTTCCAGTGCGAGCCGCGG
TGGCAGGTGGTGTACCTGTCGGCGATCACCGCCGCCGGGGTGGCCACCGTGTACGCGCTC
ATGTCGCCCAGGCTGAGCGCGGCGAGGTACCGCGCCCACCGCGCGCTGCTGTTCGTCGCC
ATGGGCCTCTCCGGCGTCGTCCCCGCCGCCCACGCCGTCGCCGTCAACTGGCACGAGCCC
CGCCGGAACGTGACGCTGGCGTACGAGGGCGCCATGGCGGCGTCCTACCTCGCCGGCACC
GCGTTCTACCTCACCCGCGTCCCGGAGCGGTGGCGCCCCGGCATGTTCGACCTGTGCGGC
CACAGCCACCAGATCTTCCACGCGCTCGTCATCGCCGGCGCGCTCGCGCACTACGCCGCC
GCCATCGTCTTCATCCAGGCACGCGACGAGATGGGCTGCCCGGCGCCATAG

Peptide Sequence

PEP ID

Os06t0643700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:26235069:26238193:-1 gene:Os06g0643700 transcript:Os06t0643700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADIPOR1 description:Hly-III related domain containing protein. (Os06t0643700-01)
Sequence

MGEEAAMATMESAYHDELAPAAAPAPAKGGGSKKKRKQQKREEKRKECRLVSYHELPDYM
KENEFILDYYRSEWPILNALLSLFSWHNETINIWTHLLGFVLFFGLTVLHLGQYFPQVAD
LIGHLSWPISKVAENVSSNIGDVLSGAASFMQASPASSAGAMAAAWPVTAAAAATTRWPF
FVFLAGAMFCLLSSAACHLLSCHSHRLNLFLIRLDYTGIAVMIVVSFFPPIYYIFQCEPR
WQVVYLSAITAAGVATVYALMSPRLSAARYRAHRALLFVAMGLSGVVPAAHAVAVNWHEP
RRNVTLAYEGAMAASYLAGTAFYLTRVPERWRPGMFDLCGHSHQIFHALVIAGALAHYAA
AIVFIQARDEMGCPAP

Transcript Sequence

Transcript ID

Os06t0643700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:26235069:26238193:-1 gene:Os06g0643700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADIPOR1 description:Hly-III related domain containing protein. (Os06t0643700-01)
Sequence

GTCCTAGGCTCTTTCCCTTTTTAACCCCGTGCCACAGCTAGCCAGCCAAGCACTGCACAA
ACCTTTCCCCTGAAGAGGCCAAGAAGTTATGGGAGAGGAGGCAGCCATGGCCACCATGGA
GAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGG
GAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGT
GAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCG
CTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCAT
CAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCT
TGGCCAGTACTTCCCCCAGGTTGCTGATCTCATCGGACACCTCTCCTGGCCAATCTCAAA
GGTTGCTGAAAATGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCAT
GCAGGCGAGCCCGGCGTCGAGCGCCGGCGCCATGGCGGCGGCGTGGCCGGTGACGGCGGC
GGCGGCGGCGACGACGCGGTGGCCGTTCTTCGTGTTCCTCGCGGGCGCCATGTTCTGCCT
GCTGAGCAGCGCGGCGTGCCACCTCCTGTCGTGCCACTCGCACCGCCTCAACCTGTTCCT
CATCCGCCTCGACTACACCGGCATCGCCGTCATGATCGTCGTCTCCTTCTTCCCGCCCAT
CTACTACATCTTCCAGTGCGAGCCGCGGTGGCAGGTGGTGTACCTGTCGGCGATCACCGC
CGCCGGGGTGGCCACCGTGTACGCGCTCATGTCGCCCAGGCTGAGCGCGGCGAGGTACCG
CGCCCACCGCGCGCTGCTGTTCGTCGCCATGGGCCTCTCCGGCGTCGTCCCCGCCGCCCA
CGCCGTCGCCGTCAACTGGCACGAGCCCCGCCGGAACGTGACGCTGGCGTACGAGGGCGC
CATGGCGGCGTCCTACCTCGCCGGCACCGCGTTCTACCTCACCCGCGTCCCGGAGCGGTG
GCGCCCCGGCATGTTCGACCTGTGCGGCCACAGCCACCAGATCTTCCACGCGCTCGTCAT
CGCCGGCGCGCTCGCGCACTACGCCGCCGCCATCGTCTTCATCCAGGCACGCGACGAGAT
GGGCTGCCCGGCGCCATAGCTAAGCTAGCGATCGAACACACAAGAAAACATTTCTCTCCA
TGGATCGATGAACCAAATGATAATTCGATACAGCAGAGTACACAAGAAGCATATATATAC
AGCGGTAGACGATCGAATTAATTGATTTGAGTGGTTTTGTTTTTGTGAGGTTTTTTTTTA
AAATTTTTAAGTTTGTTTAGCTTGCAGGAGTCGGTCATCAAGTGTGAGATATTACCGTGT
CGTCCGGTTAATGACAAGGATTTATTGATTGTTAT