Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0643100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26199409:26202782:-1 gene:Os06g0643100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta3 subunit description:Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os06t0643100-01)
Sequence	ATGTCGATCTTCGAGTACAATGGTTCCGCCGTGGTGGCGATGGTGGGGAAGAACTGCTTC GCGATCGCCAGCGACCGGCGGCTCGGGGTGCAGCTGCAGACCGTCGCGACGGACTTCCAG AGGGTGTTCAAGATCCACGACAAGCTCTACATCGGCCTCTCCGGCCTCGCCACCGACGCG CAGACGCTGTACCAGCGCCTGGTGTTCAGGCACAAGCTGTATCAACTGCGGGAGGAGAGG GACATGAAGCCCCAGACCTTCGCCAGCCTCGTCTCCGCTCTCCTCTACGAGAAGAGATTT GGACCATACTTCTGCCAGCCTGTTATCGCTGGACTTGGAGAGGACAATGAGCCATTTATT TGTACCATGGACTGCATTGGTGCAAAGGAACTAGCTAAGGATTTCGTTGTATCGGGGACA GCATCGGAGTCTCTATATGGTGCTTGTGAGTCCATGTACAAACCAAACATGGAACCTGAA GAACTCTTTGAGACTATCTCACAAGCTCTGCAGTCATCAGTTGATCGTGATTGCCTCAGT GGTTGGGGAGGCTTTGTTCTGCTTGTGACACCAACCGAAGTAAAAGAGTGTGTGATCAAG GGCAGGATGGACTAA

Peptide Sequence

PEP ID	Os06t0643100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26199409:26202782:-1 gene:Os06g0643100 transcript:Os06t0643100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta3 subunit description:Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os06t0643100-01)
Sequence	MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLS GWGGFVLLVTPTEVKECVIKGRMD

Transcript Sequence

Transcript ID	Os06t0643100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26199409:26202782:-1 gene:Os06g0643100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome beta3 subunit description:Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os06t0643100-01)
Sequence	TTCTCCTCCTCGACTTCGAACCTCGACGCCTGCATCCGCATCCGCCTCCGCCTCCGCCTC CGCCTCCGCCGCGAACTCGCCGCCGCGCCGGCCATGTCGATCTTCGAGTACAATGGTTCC GCCGTGGTGGCGATGGTGGGGAAGAACTGCTTCGCGATCGCCAGCGACCGGCGGCTCGGG GTGCAGCTGCAGACCGTCGCGACGGACTTCCAGAGGGTGTTCAAGATCCACGACAAGCTC TACATCGGCCTCTCCGGCCTCGCCACCGACGCGCAGACGCTGTACCAGCGCCTGGTGTTC AGGCACAAGCTGTATCAACTGCGGGAGGAGAGGGACATGAAGCCCCAGACCTTCGCCAGC CTCGTCTCCGCTCTCCTCTACGAGAAGAGATTTGGACCATACTTCTGCCAGCCTGTTATC GCTGGACTTGGAGAGGACAATGAGCCATTTATTTGTACCATGGACTGCATTGGTGCAAAG GAACTAGCTAAGGATTTCGTTGTATCGGGGACAGCATCGGAGTCTCTATATGGTGCTTGT GAGTCCATGTACAAACCAAACATGGAACCTGAAGAACTCTTTGAGACTATCTCACAAGCT CTGCAGTCATCAGTTGATCGTGATTGCCTCAGTGGTTGGGGAGGCTTTGTTCTGCTTGTG ACACCAACCGAAGTAAAAGAGTGTGTGATCAAGGGCAGGATGGACTAAATTTATCATTGC GAAGAGTTCTTGGAACCATTTCTGATGCCTGCTGTTCCTGGTCTCTCAGCATTACTATCC GTGTTGTATGTGGATTCCGAGGGAACCTTGTAATATCAAAGATGTTCATTCACCCGTAGA AGAAACTGTTGTTTTCTTACTTTTCTACGCTTCCTATGAATGAAAGGACTTCTATTTGTT GCATGAGATGTGCACTTCTTGGCAGTCCTTGGCCTTGATGATGACGATTATACTGATCAG TAAGCCGGCTACTGGTTAATTAGCTAAGAATACGCGTATCGTGGTGCAATGAGCTACTCA TACTCACCCTTCTCAGGC