Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0643000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:26190057:26198119:-1 gene:Os06g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os06t0643000-01)
Sequence	ATGGCGACGCCGTCGTCGTTTTCGTCGGCGAGGAAGAAGGCGCCGAGCCCGCCGAAGCAC CGCCACGACGGCACCTCCGGGCTGCCGTTCGGCATGGACTGGAGCCCGCCCCCGAAGAGA TGGGAGGGAAGGAACACCATATGGCCACATAACCCTCAAACCGGATGGAGTTACTGTGTG ATGATTCCTTCTTGGATCGCTCAGACACCTGAAGCTAGTGCGACTGCTGACAACTTCTTG AAATCCATAGTTTTTTACAGGATACATGTTGGTATACAATCTCCAGAAGGCATCAGCTCT AGCCACGGAGTTCTTCGAAGGTTTAGTGACTTTCTAAAGTTATCTTCTGATCTTAAGCAG GAATTTCCCAGAAAAGGAATCCCCCCTGCTCCACCGAAGCATGCCTTTTCAAGAATAAAT TCAAGCAGGGTGCTTCTAGAAGAGAGAAGGAACGCTTTGGAGGAGTGGATGCAAAAGCTA CTTTCTGACATTGAGTTGTCGAGAAGTGCACCTGTTGCTGCTTTTCTTGAGCTGGAAGCT GCTGCACGCTCATATTACCAAGATTGGAATCAGCGCCCTTCTGAAGTGGGTTCTTCAGCA AAAAGTAGTGCAGATTCTTCTCCGCGTCCTGATGAACATGGTTCAGGTGTTCTCTCTGAG TCCAGTCAAATGAATTCAGCCTTTGCTCATGGTAACGGTCCGACAGGAGCAACTGGTAAT GGTATGCTGGGAGAGTCTATCTTAGATCAGCCCAATGAGCGGGCTAGTAGCATGTCAAAT CACAGGAAAAAGAACCATGTCTTTTTGGAACATGGTGTTAGGAATGGTTCCATAGATACT TATAAGGGAGTGGTTTCCGAAGAGGATCACGATTCTAACCCTGGCCATGCCAGGAAGGAC TCTGCTGAAAGTATAGGAAGTGATTTGAGTTCTTTGAGGGGCAGTGAATTATCGGTTCCT GGAGTTAGTAGTTCCCTTTGGGATGGTCCTGTGGATCTTCCAAGTGGAATTGATGGACAT AGCCAAACAGAACAATTTACAGGTTTAGATATGCAGCTTTTATATGATATGGATGCACAA ATCATCCTTCCTGCTGATCAAAGGCCGAAGTTGACTAGACTTTTGATCAGCATGGACAGA AGACAGGTGACAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGGAAGTG GCTGTCAAAGAATATCTTGCGACAAAGGTCAAAGATTTGGAGGTTGAGTTGGAAGCTACG AAGAAAAAAGACAAAGAGATTCTACATCAGGCTGTTTTGACCGAAAGAGAGAAAATTACC CAACTTCAATGGGATAAGGATGAGCTCTACAGGAAGTACTCTGAAATGGAGTCAAACCTG AAGATTGAACAAAATGAGAAAACTCGTGTGCAGTCAGAGAAAACAACTGCTAGCGGTGAA AAAGAAATGTTACTGGAAGAGCTAGAAACTAAACGAAAAGAAGTTGAGAGTTTGCAGCAA CATATTGGAGAATTCGAGGCAAAGTCTAAAGCAGATATAAAAGTTCTTGTTAAAGAGGTG AAATCTCTTCGGAACTCCCAAAAAGAGATGAAGAAAGTGCTGAATCAGTATCATGAGGAG AAGACTGAATTAGAGAGGATTGTTAACAGGGAGAAACAGCGGTCAACACGTGCAAGGTTC TCCCGTGAAAAAATTCTTCACGAATGCAGACTGCTCCGTGAGCGTCTACAGGAATGTACT GCCAAGTTTGTTGCAGATGAGCAAGACACTATGACTATTGATTTATCATCTTTGCCTGAT GCTTTAGATCTTGTGACGACATCAGACAATAGAATACGTTTGCTTGTTGCTGAGGCTCAA CTTCTGTCACGAGATGATGAACAGGGCTCTTCTGATGATGGTGATAATTCTGATGGTAAA TCCTCAGTTACCATGAGCAGTGAAGATGCATATGTTACTGATGAAGAGACAACAAAAATG TTATCTGATCTGCTTATTGACAATGCACAACTGAGGTTGCGCTTGAATTCTCTCATCCGT AATGCTGTAAATACTGCTGTGAAGACGGAGAAAGAAGGTAGTGATGGAACCGTGCCAAAA AAGACGGTGCTTAATTGGTTATTGGACAGATAG

Peptide Sequence

PEP ID	Os06t0643000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:26190057:26198119:-1 gene:Os06g0643000 transcript:Os06t0643000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os06t0643000-01)
Sequence	MATPSSFSSARKKAPSPPKHRHDGTSGLPFGMDWSPPPKRWEGRNTIWPHNPQTGWSYCV MIPSWIAQTPEASATADNFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQ EFPRKGIPPAPPKHAFSRINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLELEA AARSYYQDWNQRPSEVGSSAKSSADSSPRPDEHGSGVLSESSQMNSAFAHGNGPTGATGN GMLGESILDQPNERASSMSNHRKKNHVFLEHGVRNGSIDTYKGVVSEEDHDSNPGHARKD SAESIGSDLSSLRGSELSVPGVSSSLWDGPVDLPSGIDGHSQTEQFTGLDMQLLYDMDAQ IILPADQRPKLTRLLISMDRRQVTAKTDMEDLIARLNQEVAVKEYLATKVKDLEVELEAT KKKDKEILHQAVLTEREKITQLQWDKDELYRKYSEMESNLKIEQNEKTRVQSEKTTASGE KEMLLEELETKRKEVESLQQHIGEFEAKSKADIKVLVKEVKSLRNSQKEMKKVLNQYHEE KTELERIVNREKQRSTRARFSREKILHECRLLRERLQECTAKFVADEQDTMTIDLSSLPD ALDLVTTSDNRIRLLVAEAQLLSRDDEQGSSDDGDNSDGKSSVTMSSEDAYVTDEETTKM LSDLLIDNAQLRLRLNSLIRNAVNTAVKTEKEGSDGTVPKKTVLNWLLDR

Transcript Sequence

Transcript ID	Os06t0643000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:26190057:26198119:-1 gene:Os06g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os06t0643000-01)
Sequence	GCTTGGCTGCCACCGCCGCGCGTTGACGGTTAGACGCCACCGCGGGAGGAGAGCCCCTCC CTCCCCGTCCGCGTCCGCGTCCGCCTCATCTCCGCCGCCCTCTTACTCCCCCTCCCCTTC CTCCACTCCGTCCACCTCGGAATCGTCGGCGCGACGCCTCCAAACCCCCGCATCGATTCC TCCCTCCCACCTCACCCCACCCTTCCGCCCGCTCGATCCACCGCCGAAGCGGGCGGCGAT GGCGACGCCGTCGTCGTTTTCGTCGGCGAGGAAGAAGGCGCCGAGCCCGCCGAAGCACCG CCACGACGGCACCTCCGGGCTGCCGTTCGGCATGGACTGGAGCCCGCCCCCGAAGAGATG GGAGGGAAGGAACACCATATGGCCACATAACCCTCAAACCGGATGGAGTTACTGTGTGAT GATTCCTTCTTGGATCGCTCAGACACCTGAAGCTAGTGCGACTGCTGACAACTTCTTGAA ATCCATAGTTTTTTACAGGATACATGTTGGTATACAATCTCCAGAAGGCATCAGCTCTAG CCACGGAGTTCTTCGAAGGTTTAGTGACTTTCTAAAGTTATCTTCTGATCTTAAGCAGGA ATTTCCCAGAAAAGGAATCCCCCCTGCTCCACCGAAGCATGCCTTTTCAAGAATAAATTC AAGCAGGGTGCTTCTAGAAGAGAGAAGGAACGCTTTGGAGGAGTGGATGCAAAAGCTACT TTCTGACATTGAGTTGTCGAGAAGTGCACCTGTTGCTGCTTTTCTTGAGCTGGAAGCTGC TGCACGCTCATATTACCAAGATTGGAATCAGCGCCCTTCTGAAGTGGGTTCTTCAGCAAA AAGTAGTGCAGATTCTTCTCCGCGTCCTGATGAACATGGTTCAGGTGTTCTCTCTGAGTC CAGTCAAATGAATTCAGCCTTTGCTCATGGTAACGGTCCGACAGGAGCAACTGGTAATGG TATGCTGGGAGAGTCTATCTTAGATCAGCCCAATGAGCGGGCTAGTAGCATGTCAAATCA CAGGAAAAAGAACCATGTCTTTTTGGAACATGGTGTTAGGAATGGTTCCATAGATACTTA TAAGGGAGTGGTTTCCGAAGAGGATCACGATTCTAACCCTGGCCATGCCAGGAAGGACTC TGCTGAAAGTATAGGAAGTGATTTGAGTTCTTTGAGGGGCAGTGAATTATCGGTTCCTGG AGTTAGTAGTTCCCTTTGGGATGGTCCTGTGGATCTTCCAAGTGGAATTGATGGACATAG CCAAACAGAACAATTTACAGGTTTAGATATGCAGCTTTTATATGATATGGATGCACAAAT CATCCTTCCTGCTGATCAAAGGCCGAAGTTGACTAGACTTTTGATCAGCATGGACAGAAG ACAGGTGACAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGGAAGTGGC TGTCAAAGAATATCTTGCGACAAAGGTCAAAGATTTGGAGGTTGAGTTGGAAGCTACGAA GAAAAAAGACAAAGAGATTCTACATCAGGCTGTTTTGACCGAAAGAGAGAAAATTACCCA ACTTCAATGGGATAAGGATGAGCTCTACAGGAAGTACTCTGAAATGGAGTCAAACCTGAA GATTGAACAAAATGAGAAAACTCGTGTGCAGTCAGAGAAAACAACTGCTAGCGGTGAAAA AGAAATGTTACTGGAAGAGCTAGAAACTAAACGAAAAGAAGTTGAGAGTTTGCAGCAACA TATTGGAGAATTCGAGGCAAAGTCTAAAGCAGATATAAAAGTTCTTGTTAAAGAGGTGAA ATCTCTTCGGAACTCCCAAAAAGAGATGAAGAAAGTGCTGAATCAGTATCATGAGGAGAA GACTGAATTAGAGAGGATTGTTAACAGGGAGAAACAGCGGTCAACACGTGCAAGGTTCTC CCGTGAAAAAATTCTTCACGAATGCAGACTGCTCCGTGAGCGTCTACAGGAATGTACTGC CAAGTTTGTTGCAGATGAGCAAGACACTATGACTATTGATTTATCATCTTTGCCTGATGC TTTAGATCTTGTGACGACATCAGACAATAGAATACGTTTGCTTGTTGCTGAGGCTCAACT TCTGTCACGAGATGATGAACAGGGCTCTTCTGATGATGGTGATAATTCTGATGGTAAATC CTCAGTTACCATGAGCAGTGAAGATGCATATGTTACTGATGAAGAGACAACAAAAATGTT ATCTGATCTGCTTATTGACAATGCACAACTGAGGTTGCGCTTGAATTCTCTCATCCGTAA TGCTGTAAATACTGCTGTGAAGACGGAGAAAGAAGGTAGTGATGGAACCGTGCCAAAAAA GACGGTGCTTAATTGGTTATTGGACAGATAGAAAAACCAGTATATATTCTTGTGAATTAG CTCTTCTAGTTATGCGGCCTTCTCAAAGTTATATGATGAGTATTGTTATAATGTGGGAGT AACAGGAGTGGAGAAAAAAAAATCAAAATCTTCCTTACATGCAGATCAAGCATGTGGTGG TGTTGTATCTCTTATTTACAAAGATTGATCAAGGATAATATATTTAGGAGGCTTCTGAGC CTGGCCTCCTAGCGGGAGAACGGTAGGGCTCATATGGTTTTGGGGAGGCTTGCAACTGGA GTGGTAGAGAACATGGGTCCCCCTTTTTTGCACCATACTTCAATTTGTAATTGCCGAGCT GATGGATAGCTGCATGGTTGTATCTTTGTACAGATGTTTCAGATGGTGAGTTCCCAGCAG GAAAGCATTGTACACTATAGTTAAACTCTGGATTAATCTTCTTCACCCATAGAGTGCTCA ACTGTTAAATCAGTACTTCTTACTCATGCAGTTGCACCTCTTCCAGACTGAAAACTTC