Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0639100-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:25968133:25974634:-1 gene:Os06g0639100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0639100-01);Similar to protein binding / zinc ion binding. (Os06t0639100-02);Similar to protein binding / zinc ion binding. (Os06t0639100-03);Similar to predicted protein. (Os06t0639100-04);Similar to predicted protein. (Os06t0639100-05)
Sequence	ATGGCGGACGTCGCCGCGGACCGGCCTCCCGCGGCCGAGCAGGAGGAGGCGCGGCCGCCC TCATCCACCGCGGCGGTGGCGGAGGAGGACGAGGAGGAGGAGGAAGGGGACGTGTGCCGG ATCTGCCGGAACCCGGGGGACGACGAGCACCCGCTCCGGTACCCGTGCGCCTGCAGCGGC AGCATCAAGTTCGTGCACCAGGACTGCCTCCTCCAGTGGCTCGACCACAGCAACTCCCGC CAGTGCGAGGTTTGCAAACATGCATTCTCTTTCTCGCCCGTCTATGCTGACAATGCTCCG TCAAGACTCCCCTTCCAAGAACTTATTGTTGGTGTTGGGATGAAAGCGTGCCATGTGCTT CAGTTTGTCCTCCGGCTTGCCTTTGTTCTTTCAGTTTGGCTCATGATTATCCCCTTCATC ACTTACTGGATATGGAGGTTAACATTCGTGAGAAGTCTTGGTGAAGCACAGAGGCTATTC TTGAGTCATATCAGCGCTCAGTTGATCCTAAGTGACTGTTTACATGGTTTTCTTCTCTCA GCTATTATTGTCCTTATATTTCTTGGAGCTACCTCTTTAAGGGACTATATAAGACACTTG CGGGAACTTGGAGGGCATGATGCTGAGAGGGATGATGGGGGCCGTGAAAGGCATGGTGCA CGAGCTGTCAGAAGGCTACCTGGTCCTAATAACAGGGTTCCTGCTGCAGATGGAAACGTT GACGAATTAGCAGAAGCCCAAGGACTTGGTGCTGGTGAACTTTTGAGAAGAAATGCAGAA AATGTTGCTGCTCGATTAGAACGACTTGAAGCTCAAGTCGAGCAGATGCTAGATGGTTTG GATGATGCAGATGGTGCAGAGGATGTTCCTTTTGATGAACTTGTAGGCATGCAAGGCCCT GTTTTCCACTTGGTTGAGAACGCAATAACAGTTCTGGCCAGCAATGCTATATTCCTCATT GTTGTGATCTTCGTACCATTCTCATTGGGAAGGATTGTCCTGTACTATCTATCATGGTTC TTCTCTTCAGCCTCTAGTCCTATGCTGGCAAGAATGATGCCGTTTACGGAAACTGCTATT TCATTGGCTAATGATACATTGAAGAGTGCACTTAATGCCGTGAAGAACTTATCTGCTGAC AGCCATAATGAAGGTGTCATTGGTCATGTCATTGAGGTGGTTACTCAATCATTGAAGATA AATGCCACTGGTCTTACTGTAATGCAGGCCTCTGGGAAGAGTAGTCTGATAAAAGGAACT GCTATTGGCTCATCCTATCTTTCTGATCTGACAACTCTTGCTGTGGGATATATGTTTATC TTTTGCCTTGTGTTTTTGTACATTGGATCATTGGCTTTACTGCGGTATGCTAGGGGAGAA CGTTTCACCATTGGGAGGCTCTACGGTATAGCTACCATTTTAGAGGCTATCCCATCTCTA TGCAGGCAATTCTTTGCTGGAATGAAGCATCTCATGACTATGGTCAAAGTTGCATTCCTT TTGGTGATTGAACTTGGTGTATTTCCCCTTATGTGCGGTTGGTGGCTTGATGTATGCACC TTAAAGATGCTGGGTGCAACAATTGCTCAAAGAGTTGAATTCTTCACGATGTCACCCTTG GCAAGCTCCTCTATCCATTGGCTTGTTGGGATTATATATATGCTTCAAATAAGCATATTT GTCAGCCTTCTTCGAGGGGTACTGCGCAATGGTGTTCTTTATTTCTTGCGGGACCCTGCC GATCCAAATTACAATCCGTTTAGGGATTTGATTGATGATCCTGTGCATAAACATGCCCGG CGAGTTCTTCTGTCTGTTGCTGTGTATGGAAGCTTGATTGTGATACTTGTTTTCTTACCT GTCAAACTGGCCATGCGAGTAGCTCCATCGATTTTTCCTCTGGACATCACCATTTTTGAC CCATTTACAGAGATCCCAGTTGATGTGCTTCTGTTCCAAATATGCATCCCGTTTGCAATT GAGCACTTCAAGCCTCGTGCAACAATTAAAGCACTTCTGCGTCATTGGTTTGCTGCTGTT GGTTGGGCATTAGGCTTAACTGATTTCTTACTGCCAAGACATGAAGAAAATGGTGGGCAA GAGAACTGGAATGGCAGAGCAGGTAGAGATAGGGTACATGGTGGCCGGGAAATGGTTGCC CCACAGCTGGAGCAGCGTATGATACAACATGTTGCTGATAATCTGAATGGCAGGGGTAAT GCCAATGACAGTAACGAGGTCGCTGAAGAATCTGATGTTGATGACCAGGGAGATTCAGAG TATGGTTTCGTCCTTCGGATTGTGCTCTTGCTTGTACTGGCATGGATGACTCTGCTGATA TTCAATGCTGGAATGATTGTTATTCCAATCTCACTTGGTCGTTTAGTTTTTGAGGCTATT CCCCGCCTGCCAATCACACATGGCATCAAGTGCAATGATTTATTCTCTTTCAGCATTGGA TGTTATATTATCTGGAGTGCAGCAGCTGGAACCAGATATGCAATTGATTACATTCGATCA CGACGACTGGCCTTCCTAGTGCAACAAATCTGCAAGTGGTGCTCTATTGTTGTGAAGAGT TCTGCTCTCCTGTCAATATGGATCTTTGTTATTCCTGTGTTGATTGGACTCCTGTTTGAG TTACTGGTCATTGTACCCATGAGGGTGCCTATTGACGAGAGTCCGGTTTTCCTGTTGTAT CAGGATTGGGCTCTTGGATTAATATTCTTAAAAATATGGACTAGGCTGGTTATGTTGGAT CAAATGGCACCTTTGGTTGATGAAAGCTGGAGGACGAAGTTTGAGAGGGTTAGAGAGGAT GGCTTCTCCCGTTTGAGAGGTCTATGGGTCCTGCATGAAATCATAATGCCTATTGTCACC AAGCTCCTTACAGCTCTCTGCGTTCCATATGTTCTTGCAAGGGGTGTCTTCCCAGTGCTT GGTTACCCACTCATTGTGAACTCAGCGGTCTACCGTTTCGCGTGGCTTGGCTGCCTGATA TTCAGCGCGCTGTTCTTCTGTGGCAAGAGATTCCATGTTTGGTTCACCAATCTCCACAAT TCCATTAGGGATGACCGTTATCTGATTGGGCGGAGGCTGCACAACTTTGGTGAGGACTCA CTCCATTCAAGTGAACCTGGAACAACTACAGCGTCTGACGATGATGAACACGAGCAAGCA CTCATTCCTCGCGATCAGGAAGGAGAGTTGGGGCTGAGGTTCAGGCGCCATATCATGCGT GGAAACCAACCGAGAATGGCTGCATAA

Peptide Sequence

PEP ID	Os06t0639100-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:25968133:25974634:-1 gene:Os06g0639100 transcript:Os06t0639100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0639100-01);Similar to protein binding / zinc ion binding. (Os06t0639100-02);Similar to protein binding / zinc ion binding. (Os06t0639100-03);Similar to predicted protein. (Os06t0639100-04);Similar to predicted protein. (Os06t0639100-05)
Sequence	MADVAADRPPAAEQEEARPPSSTAAVAEEDEEEEEGDVCRICRNPGDDEHPLRYPCACSG SIKFVHQDCLLQWLDHSNSRQCEVCKHAFSFSPVYADNAPSRLPFQELIVGVGMKACHVL QFVLRLAFVLSVWLMIIPFITYWIWRLTFVRSLGEAQRLFLSHISAQLILSDCLHGFLLS AIIVLIFLGATSLRDYIRHLRELGGHDAERDDGGRERHGARAVRRLPGPNNRVPAADGNV DELAEAQGLGAGELLRRNAENVAARLERLEAQVEQMLDGLDDADGAEDVPFDELVGMQGP VFHLVENAITVLASNAIFLIVVIFVPFSLGRIVLYYLSWFFSSASSPMLARMMPFTETAI SLANDTLKSALNAVKNLSADSHNEGVIGHVIEVVTQSLKINATGLTVMQASGKSSLIKGT AIGSSYLSDLTTLAVGYMFIFCLVFLYIGSLALLRYARGERFTIGRLYGIATILEAIPSL CRQFFAGMKHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTLKMLGATIAQRVEFFTMSPL ASSSIHWLVGIIYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHAR RVLLSVAVYGSLIVILVFLPVKLAMRVAPSIFPLDITIFDPFTEIPVDVLLFQICIPFAI EHFKPRATIKALLRHWFAAVGWALGLTDFLLPRHEENGGQENWNGRAGRDRVHGGREMVA PQLEQRMIQHVADNLNGRGNANDSNEVAEESDVDDQGDSEYGFVLRIVLLLVLAWMTLLI FNAGMIVIPISLGRLVFEAIPRLPITHGIKCNDLFSFSIGCYIIWSAAAGTRYAIDYIRS RRLAFLVQQICKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPIDESPVFLLY QDWALGLIFLKIWTRLVMLDQMAPLVDESWRTKFERVREDGFSRLRGLWVLHEIIMPIVT KLLTALCVPYVLARGVFPVLGYPLIVNSAVYRFAWLGCLIFSALFFCGKRFHVWFTNLHN SIRDDRYLIGRRLHNFGEDSLHSSEPGTTTASDDDEHEQALIPRDQEGELGLRFRRHIMR GNQPRMAA

Transcript Sequence

Transcript ID	Os06t0639100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:25968133:25974634:-1 gene:Os06g0639100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0639100-01);Similar to protein binding / zinc ion binding. (Os06t0639100-02);Similar to protein binding / zinc ion binding. (Os06t0639100-03);Similar to predicted protein. (Os06t0639100-04);Similar to predicted protein. (Os06t0639100-05)
Sequence	ACCGCCTCCTCCGCCCCAACGCGGTCTCCCTCCCCCCCCCCTCCCCCGCGCGATCGCTCG CACGCACGGCCGCCGCCGCCGCCGCGCCCAGCCATGGCGGACGTCGCCGCGGACCGGCCT CCCGCGGCCGAGCAGGAGGAGGCGCGGCCGCCCTCATCCACCGCGGCGGTGGCGGAGGAG GACGAGGAGGAGGAGGAAGGGGACGTGTGCCGGATCTGCCGGAACCCGGGGGACGACGAG CACCCGCTCCGGTACCCGTGCGCCTGCAGCGGCAGCATCAAGTTCGTGCACCAGGACTGC CTCCTCCAGTGGCTCGACCACAGCAACTCCCGCCAGTGCGAGGTTTGCAAACATGCATTC TCTTTCTCGCCCGTCTATGCTGACAATGCTCCGTCAAGACTCCCCTTCCAAGAACTTATT GTTGGTGTTGGGATGAAAGCGTGCCATGTGCTTCAGTTTGTCCTCCGGCTTGCCTTTGTT CTTTCAGTTTGGCTCATGATTATCCCCTTCATCACTTACTGGATATGGAGGTTAACATTC GTGAGAAGTCTTGGTGAAGCACAGAGGCTATTCTTGAGTCATATCAGCGCTCAGTTGATC CTAAGTGACTGTTTACATGGTTTTCTTCTCTCAGCTATTATTGTCCTTATATTTCTTGGA GCTACCTCTTTAAGGGACTATATAAGACACTTGCGGGAACTTGGAGGGCATGATGCTGAG AGGGATGATGGGGGCCGTGAAAGGCATGGTGCACGAGCTGTCAGAAGGCTACCTGGTCCT AATAACAGGGTTCCTGCTGCAGATGGAAACGTTGACGAATTAGCAGAAGCCCAAGGACTT GGTGCTGGTGAACTTTTGAGAAGAAATGCAGAAAATGTTGCTGCTCGATTAGAACGACTT GAAGCTCAAGTCGAGCAGATGCTAGATGGTTTGGATGATGCAGATGGTGCAGAGGATGTT CCTTTTGATGAACTTGTAGGCATGCAAGGCCCTGTTTTCCACTTGGTTGAGAACGCAATA ACAGTTCTGGCCAGCAATGCTATATTCCTCATTGTTGTGATCTTCGTACCATTCTCATTG GGAAGGATTGTCCTGTACTATCTATCATGGTTCTTCTCTTCAGCCTCTAGTCCTATGCTG GCAAGAATGATGCCGTTTACGGAAACTGCTATTTCATTGGCTAATGATACATTGAAGAGT GCACTTAATGCCGTGAAGAACTTATCTGCTGACAGCCATAATGAAGGTGTCATTGGTCAT GTCATTGAGGTGGTTACTCAATCATTGAAGATAAATGCCACTGGTCTTACTGTAATGCAG GCCTCTGGGAAGAGTAGTCTGATAAAAGGAACTGCTATTGGCTCATCCTATCTTTCTGAT CTGACAACTCTTGCTGTGGGATATATGTTTATCTTTTGCCTTGTGTTTTTGTACATTGGA TCATTGGCTTTACTGCGGTATGCTAGGGGAGAACGTTTCACCATTGGGAGGCTCTACGGT ATAGCTACCATTTTAGAGGCTATCCCATCTCTATGCAGGCAATTCTTTGCTGGAATGAAG CATCTCATGACTATGGTCAAAGTTGCATTCCTTTTGGTGATTGAACTTGGTGTATTTCCC CTTATGTGCGGTTGGTGGCTTGATGTATGCACCTTAAAGATGCTGGGTGCAACAATTGCT CAAAGAGTTGAATTCTTCACGATGTCACCCTTGGCAAGCTCCTCTATCCATTGGCTTGTT GGGATTATATATATGCTTCAAATAAGCATATTTGTCAGCCTTCTTCGAGGGGTACTGCGC AATGGTGTTCTTTATTTCTTGCGGGACCCTGCCGATCCAAATTACAATCCGTTTAGGGAT TTGATTGATGATCCTGTGCATAAACATGCCCGGCGAGTTCTTCTGTCTGTTGCTGTGTAT GGAAGCTTGATTGTGATACTTGTTTTCTTACCTGTCAAACTGGCCATGCGAGTAGCTCCA TCGATTTTTCCTCTGGACATCACCATTTTTGACCCATTTACAGAGATCCCAGTTGATGTG CTTCTGTTCCAAATATGCATCCCGTTTGCAATTGAGCACTTCAAGCCTCGTGCAACAATT AAAGCACTTCTGCGTCATTGGTTTGCTGCTGTTGGTTGGGCATTAGGCTTAACTGATTTC TTACTGCCAAGACATGAAGAAAATGGTGGGCAAGAGAACTGGAATGGCAGAGCAGGTAGA GATAGGGTACATGGTGGCCGGGAAATGGTTGCCCCACAGCTGGAGCAGCGTATGATACAA CATGTTGCTGATAATCTGAATGGCAGGGGTAATGCCAATGACAGTAACGAGGTCGCTGAA GAATCTGATGTTGATGACCAGGGAGATTCAGAGTATGGTTTCGTCCTTCGGATTGTGCTC TTGCTTGTACTGGCATGGATGACTCTGCTGATATTCAATGCTGGAATGATTGTTATTCCA ATCTCACTTGGTCGTTTAGTTTTTGAGGCTATTCCCCGCCTGCCAATCACACATGGCATC AAGTGCAATGATTTATTCTCTTTCAGCATTGGATGTTATATTATCTGGAGTGCAGCAGCT GGAACCAGATATGCAATTGATTACATTCGATCACGACGACTGGCCTTCCTAGTGCAACAA ATCTGCAAGTGGTGCTCTATTGTTGTGAAGAGTTCTGCTCTCCTGTCAATATGGATCTTT GTTATTCCTGTGTTGATTGGACTCCTGTTTGAGTTACTGGTCATTGTACCCATGAGGGTG CCTATTGACGAGAGTCCGGTTTTCCTGTTGTATCAGGATTGGGCTCTTGGATTAATATTC TTAAAAATATGGACTAGGCTGGTTATGTTGGATCAAATGGCACCTTTGGTTGATGAAAGC TGGAGGACGAAGTTTGAGAGGGTTAGAGAGGATGGCTTCTCCCGTTTGAGAGGTCTATGG GTCCTGCATGAAATCATAATGCCTATTGTCACCAAGCTCCTTACAGCTCTCTGCGTTCCA TATGTTCTTGCAAGGGGTGTCTTCCCAGTGCTTGGTTACCCACTCATTGTGAACTCAGCG GTCTACCGTTTCGCGTGGCTTGGCTGCCTGATATTCAGCGCGCTGTTCTTCTGTGGCAAG AGATTCCATGTTTGGTTCACCAATCTCCACAATTCCATTAGGGATGACCGTTATCTGATT GGGCGGAGGCTGCACAACTTTGGTGAGGACTCACTCCATTCAAGTGAACCTGGAACAACT ACAGCGTCTGACGATGATGAACACGAGCAAGCACTCATTCCTCGCGATCAGGAAGGAGAG TTGGGGCTGAGGTTCAGGCGCCATATCATGCGTGGAAACCAACCGAGAATGGCTGCATAA GCAGGGACGAGTTTTTGGACAAAGCAAGGGGCATATGCACGATCTGACTTCTGCCCTGGA GCTTCTGCTTGTGATTAGTAATCCGCATTGTAGAGTGAAATGAGTCCGTCAGTTAGTGAT AGGAAAAGTAAGGATTGTTGTACAACAAAGTCCAAGGGAAGAACAGCTCAAAAAAAAAAG AATACACACCAGAAAACTCATGGTAAGCTCACTTCCCTGTGGCTATGTGTTGCTGACTGT AAATATAGACGAACTACCCCACACAATTTATTGTGGTTCTGATGTGTAATGGACAATGAA TTACTCCT