Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0638700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:25959471:25963252:-1 gene:Os06g0638700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 2 description:Putative cyclase family protein. (Os06t0638700-01)
Sequence

ATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGCCGCGCGCCAAGCTCCCCTC
GCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTG
GCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGGCGGAGGGAGGCGGATCCTGGAC
ATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCG
CTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGG
ATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTC
GACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTCCTGCATTGCTG
GTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAATGGAGTCCCTGAACATCCCA
AGAGGAGTTCGTCGAGTTCTTTTCAGAACAATGAACACTGACAAGAGACTGATGTGGCAA
AAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGT
TACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATG
ATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGTAATTGTCGAAGCTCTGAAG
TTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGA
GCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGA

Peptide Sequence

PEP ID

Os06t0638700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:25959471:25963252:-1 gene:Os06g0638700 transcript:Os06t0638700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 2 description:Putative cyclase family protein. (Os06t0638700-01)
Sequence

MAHLATVVLLLVAAARQAPLAAGDHSANPRLPTCAAAPDVAAPQEHGDGGGVGGGRRILD
ITHAVRAELPVLGSCDGVGALVRLKKSMANGSRSNLSELRMSVHTGTHVDAPGHMWQPHF
DAGLDVDTLDLGLLNGPALLVDVPRHSNVTAEVMESLNIPRGVRRVLFRTMNTDKRLMWQ
KESDLSFVGFTEDGAQWLVGYTDIKLVGVDYLSVASYEHMIPAHVVFLKSKEIVIVEALK
LDDVEPGMYMLHCLPLRLAGAEGSPVRCILIK

Transcript Sequence

Transcript ID

Os06t0638700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:25959471:25963252:-1 gene:Os06g0638700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 2 description:Putative cyclase family protein. (Os06t0638700-01)
Sequence

AGTACGTCTCGCTCGAACTGCGAGCGCCATGGCTCATCTCGCCACCGTCGTGCTCCTGCT
CGTCGCGGCCGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCT
CCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGG
CGTCGGCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGT
TCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGG
CTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGC
CCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCT
CGGCCTCCTCAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGC
TGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAACAAT
GAACACTGACAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTAC
AGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTA
TCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAA
GGAAATTGTAATTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTT
ACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTAT
AAAATGATCGCGTCATTGAGGATTTGAGGTACTGTACCAGCTGAAGAGACCGCTGTAATG
TAGGATTTGGCTTTCAATGATCATGTACCTTCAAAACAGTGTTCTTTTTCATGTACGTGT
TCTTTGCTCTTCCATTTCTCTTTATCAATTCAACACTTGTGATTTTTTTATATATATCAT
ATCTCTCAAGTGCTGT