Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0632700-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:25641527:25643267:-1 gene:Os06g0632700 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os06t0632700-01);Hypothetical conserved gene. (Os06t0632700-02)
Sequence

GCAAGTGATCTTCAGCGTGAGTATGGACTATGCCTAAATTACTCTCAGGCTTGGCGTGGA
AGATCAATTGCTCAAAAGGAACTTCATAGCACACACGATGAGGTAACCAGTCAGCTACCT
TGGTTTTGTGGACGGATCATGCAGACAAACCCTCAAAGTGTGGCCACTGTAGTACCTATG
GAAGATTCAAAATTTCGTTTGTTTGTTGCATTCCATGCATCGCTTCATGGTTTTGAGCAT
GGGTGCAGACCATTACTTTTTCTTGATGTAATATCTGCAAAACCAAATAAGCAGTGGAAG
CTACTTACTGCCACTTCTGTTGATAGTGAAGGTGATGTGTTCCCAGTTGCATTTGCTGTA
GTGGATGATGAGAGCAGTGAACACTGGCATTGGTTTCTTGAGCAACTTAAATCTTCTGTG
TCAGCTTCCCGTGCCATAACATTCATATCGAATGGAGAAAATGGACTATGGGATGAAGTG
CCTTTGGTTTTCCCTGACAGTCACCACGGATACTGTGTGGACTATCTTATTGAAGAATTT
AAGACACAATTGGATGATGCATGGACCGAAGAAGCAAGAGATGTCATGGTTGAGCATCTT
AAGAAGGCCATATATGCATGCACAGTTGACGAGTTCAATCAGTATATTGAACTAATCAAA
GGTGAATCTGACAAGCTTGCTGAATGGCTTCTGGAGATTAAACCCGAGCGATGGTCAGAT
GCCTTTTTCAAAGGGTCAAGGCATGGGCAGTATTCATGCAATTTTCCTAGCACTATTGTT
GAGTGGATCCCCACCAGATACGAGCTTTCAATTGTCCAGTTAGTTGACATGATAAGATGC
AAGCTCATGGAGATGATGTACACACGCAGGGAGTCTTCTAATGCGTGGGCTGAGTTATTA
ACACCTGCAGCTAATCAGAAATTGCAGGAAGAAGTGAGCAAAGCCCACACCCTGAACGTC
ATCCCTTCTGAAAGTAATGAAAATGGCAATGTGTTCAAGGTGTGTGATGATTCTGTTAAT
GTTGTCAATATTGATGCATGGGAGTGTACCTGCCGAAAGTGGCATATTTCTGGGTTGCCA
TGCATGCATGCAATTGCAGTAATAGAGCGGATTGGACACTGCCCTTACGATTACTGTGTG
AAGTATTTCAGAACAGAATGCTACCGCTTGACCTACTCCATGTCGATAAATCCAATACCC
GATGTTATGCTGCCTCCTGCTATATTAAGTGATCAATCTCAAAGTCCAGTAACACATGCA
ACCCCAATAAGAACCCGACGACGGGTTGGCAGGCCAAAGGAGAAGCCGGCAGACCCACGC
ATCGCAATTAAAAGGGCAGTGCGGTGCAGCAGGTGCCAGGGTTATGGCCACAATAAAGCA
ACCTGCAAAGTTCCTCTGAGCACATAG

Peptide Sequence

PEP ID

Os06t0632700-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:25641527:25643267:-1 gene:Os06g0632700 transcript:Os06t0632700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os06t0632700-01);Hypothetical conserved gene. (Os06t0632700-02)
Sequence

ASDLQREYGLCLNYSQAWRGRSIAQKELHSTHDEVTSQLPWFCGRIMQTNPQSVATVVPM
EDSKFRLFVAFHASLHGFEHGCRPLLFLDVISAKPNKQWKLLTATSVDSEGDVFPVAFAV
VDDESSEHWHWFLEQLKSSVSASRAITFISNGENGLWDEVPLVFPDSHHGYCVDYLIEEF
KTQLDDAWTEEARDVMVEHLKKAIYACTVDEFNQYIELIKGESDKLAEWLLEIKPERWSD
AFFKGSRHGQYSCNFPSTIVEWIPTRYELSIVQLVDMIRCKLMEMMYTRRESSNAWAELL
TPAANQKLQEEVSKAHTLNVIPSESNENGNVFKVCDDSVNVVNIDAWECTCRKWHISGLP
CMHAIAVIERIGHCPYDYCVKYFRTECYRLTYSMSINPIPDVMLPPAILSDQSQSPVTHA
TPIRTRRRVGRPKEKPADPRIAIKRAVRCSRCQGYGHNKATCKVPLST

Transcript Sequence

Transcript ID

Os06t0632700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:25641527:25643267:-1 gene:Os06g0632700 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os06t0632700-01);Hypothetical conserved gene. (Os06t0632700-02)
Sequence

TTGCAAGTGATCTTCAGCGTGAGTATGGACTATGCCTAAATTACTCTCAGGCTTGGCGTG
GAAGATCAATTGCTCAAAAGGAACTTCATAGCACACACGATGAGGTAACCAGTCAGCTAC
CTTGGTTTTGTGGACGGATCATGCAGACAAACCCTCAAAGTGTGGCCACTGTAGTACCTA
TGGAAGATTCAAAATTTCGTTTGTTTGTTGCATTCCATGCATCGCTTCATGGTTTTGAGC
ATGGGTGCAGACCATTACTTTTTCTTGATGTAATATCTGCAAAACCAAATAAGCAGTGGA
AGCTACTTACTGCCACTTCTGTTGATAGTGAAGGTGATGTGTTCCCAGTTGCATTTGCTG
TAGTGGATGATGAGAGCAGTGAACACTGGCATTGGTTTCTTGAGCAACTTAAATCTTCTG
TGTCAGCTTCCCGTGCCATAACATTCATATCGAATGGAGAAAATGGACTATGGGATGAAG
TGCCTTTGGTTTTCCCTGACAGTCACCACGGATACTGTGTGGACTATCTTATTGAAGAAT
TTAAGACACAATTGGATGATGCATGGACCGAAGAAGCAAGAGATGTCATGGTTGAGCATC
TTAAGAAGGCCATATATGCATGCACAGTTGACGAGTTCAATCAGTATATTGAACTAATCA
AAGGTGAATCTGACAAGCTTGCTGAATGGCTTCTGGAGATTAAACCCGAGCGATGGTCAG
ATGCCTTTTTCAAAGGGTCAAGGCATGGGCAGTATTCATGCAATTTTCCTAGCACTATTG
TTGAGTGGATCCCCACCAGATACGAGCTTTCAATTGTCCAGTTAGTTGACATGATAAGAT
GCAAGCTCATGGAGATGATGTACACACGCAGGGAGTCTTCTAATGCGTGGGCTGAGTTAT
TAACACCTGCAGCTAATCAGAAATTGCAGGAAGAAGTGAGCAAAGCCCACACCCTGAACG
TCATCCCTTCTGAAAGTAATGAAAATGGCAATGTGTTCAAGGTGTGTGATGATTCTGTTA
ATGTTGTCAATATTGATGCATGGGAGTGTACCTGCCGAAAGTGGCATATTTCTGGGTTGC
CATGCATGCATGCAATTGCAGTAATAGAGCGGATTGGACACTGCCCTTACGATTACTGTG
TGAAGTATTTCAGAACAGAATGCTACCGCTTGACCTACTCCATGTCGATAAATCCAATAC
CCGATGTTATGCTGCCTCCTGCTATATTAAGTGATCAATCTCAAAGTCCAGTAACACATG
CAACCCCAATAAGAACCCGACGACGGGTTGGCAGGCCAAAGGAGAAGCCGGCAGACCCAC
GCATCGCAATTAAAAGGGCAGTGCGGTGCAGCAGGTGCCAGGGTTATGGCCACAATAAAG
CAACCTGCAAAGTTCCTCTGAGCACATAGTCTACCCATGGGTTCAGTTCTCCTATGTACA
TTTAGGTGGAGAGTTGCTCTTGTTTGCTGTAATACGAGTGATGCTATTTCTTTATAACTC
GGTACATGCATCAGTCATTGATTCTAGCTCTAAATTGCTTTGTATTTGCTTGCTTTGTTA
GGCTAACATATTTGGTCGTAAAATCGCACATTGTAATGGACGCAATAGAGAGACTTGGGA
GGTTTGCTGTTATGTAATGCTGTCCAATTTGATCTGGTTTCCCGTTCTAGCTATTGTGTG
CCAATCTGATCATCTCAACTCTCAGGCAAGGAAAGGAATATATATAGACTGTAGTTACTT
G