Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0630300-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:25498385:25501725:1 gene:Os06g0630300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1950 domain containing protein. (Os06t0630300-01);Conserved hypothetical protein. (Os06t0630300-02)
Sequence

ATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGC
TCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCCTTCGGGCTGCCCAAT
TCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAACCTGGTGGTGTGGAT
TTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTCTTGACGGTGCCCCCT
CCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGCAACGACAAAGAAGAT
CAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTAACTGAGGGAGAAAAG
CTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAGAATAAAGATGCTTCC
TTCTCACAGAAGGAAAAGCGGAAGAGAGATCGTGGCCAGGCTAGCAGGGGGAAGAACTAC
GTTGAAGAAGAGAAGCGACTTCTGAGGGGGAGTGGCGTCTACTCTGGCTTTGACACTTGA

Peptide Sequence

PEP ID

Os06t0630300-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:25498385:25501725:1 gene:Os06g0630300 transcript:Os06t0630300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1950 domain containing protein. (Os06t0630300-01);Conserved hypothetical protein. (Os06t0630300-02)
Sequence

MKRAAPWEEPLEVSSDDSLSSDSDDEAGKGKGDNAFGLPNSTKAAAPDAMSKKKKPGGVD
FNALSRHGYRGGPSVLTVPPPKVEPNWSWSTGKDRNDKEDQTESYEERERTRTAVTEGEK
LIGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGKNYVEEEKRLLRGSGVYSGFDT

Transcript Sequence

Transcript ID

Os06t0630300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:25498385:25501725:1 gene:Os06g0630300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1950 domain containing protein. (Os06t0630300-01);Conserved hypothetical protein. (Os06t0630300-02)
Sequence

AGGTGTACTTTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAA
TCGAGGGTTTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGC
GACCTTCTCCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGT
CTCCGTGATCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCC
GACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCC
TTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAA
CCTGGTGGTGTGGATTTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTC
TTGACGGTGCCCCCTCCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGC
AACGACAAAGAAGATCAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTA
ACTGAGGGAGAAAAGCTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAG
AATAAAGATGCTTCCTTCTCACAGAAGGAAAAGCGGAAGAGAGATCGTGGCCAGGCTAGC
AGGGGGAAGAACTACGTTGAAGAAGAGAAGCGACTTCTGAGGGGGAGTGGCGTCTACTCT
GGCTTTGACACTTGATGCTCTGTTTTCTGTGCCTTTGTTTGACATGCATAGTAAATTGTT
TTGTGCTTGTGCTATTTGATGTGTGTTGGTAGTTCGTGCTTAATCCTCTGCTTCCATATC
TGTGGCGTTGTACTGATTGAATTGAATTCATCTTGGATCATTGGCATACCGTGTCCCATA
TTTGTTGGTAATTTACTAACTTTAGATGC