Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0625800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:25235825:25238208:-1 gene:Os06g0625800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0625800-01)
Sequence	ATGGGCTCCGTTGGCTTGGCGCGAATGCTGAGGTCGCTGTGCGTCGCCGGCGATCTCGCT AGGGCGGTGGGTCTCCTGTGGCGGAGTACGGTGTGCCCCGGTGAGGGGACCTACGCGCTT CTGCTGCAGGAATGCGTGAACCGGCGGGACGCGAGGATGGGGAAGAGGATCCACGCGCGC ATGGTGTCGGTGGGGTTTGGCGGCGGCGTCTACATCGTCACCAAGCTGCTGATCTTTTAC GTCAAGATCGGTGAGCTTGGTGTTGCGCGGAAGGTGTTCGACGGAATGCCGCAGAGGAGC GTCGTGGCGTGGAACGCCATGATATCCGGGTGCGCGCGCGGCGGCGCGGAGGCGCGGGCG GTGGAGATGTTTGGGTCGATGCGGGCGGAGGGGATGAGGCCGGACCAGTTCACGTTCGCG TCGGTGCTCTGCGCGTGCGCGAGGCTGGCCGCGCTGGAGCACGGCCGGCGCGTGCACGGC GTCATGGTCAAGTCGCGCGTCGGCGGCGGCAACGTCTTCGTCGACAGCGCGCTCGTCGAC ATGTACCTCAAGTGCAGCAGCCCCGAGGAGGCGCGCCGGGCGTTCGCGGCGGCGCCGGCG CGGAACGTCACCATGTGGACCGCCGTCATCTCCGGGCACGGCCAGCACGGGCGCGCCGCG GAGGCGCTGGCGCTGTTCGACCGGATGACGCGGGTGGACGGGCTCCGGCCGAACGACGTC ACGTTCCTCGCCGTGCTCTCGGCGTGCGCGCACGCCGGGCTCGTCGGCGAGGGTCTGCGC CACCTCTCGTCCATGTCGTCGGGCTACGGCCTCACGCCGAGGGGCGAGCACTACGCGGCG GCGGTCGACATGCTCGCCAGGGTCGGCCGGCTCGGCGACGCCTACGAGCTCGTCAAGAAC CTGCCGGACTGCCAGGAGCACTCGGTGGTCTGGGGCGCGCTGCTCGGCGCCGGCAGGAAG CACGGCGACGTGAGGCTGGTCGAGCTCGCCGCGCGCCGCTTCTTCCGGCTGCAGCCGGGG AACGCCGGCAAGTACGTCGTCCTGGCGAACGCGTACGCCGCGCGCGAGATGTGGGGCAGC GTCGCCGGCGCGCACGAGGCGATGCGGTCGCTGGGAATCAAGAAGGATCCGGCCTGGAGC GCCGTCGAGGTCCGGGGCAAAAGGCACACCTTCCTCGCCGGCGACTCGTACCACGACGAG CGCTCGGCGATATACGCGGCCTGCAACGCGTTGGCCGCCGCCGTCGCCGAGCAGTCCGTG CCTCCGGTTATGGATGGAGATGATGCCAGCCATTGCAGCTGA

Peptide Sequence

PEP ID	Os06t0625800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:25235825:25238208:-1 gene:Os06g0625800 transcript:Os06t0625800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0625800-01)
Sequence	MGSVGLARMLRSLCVAGDLARAVGLLWRSTVCPGEGTYALLLQECVNRRDARMGKRIHAR MVSVGFGGGVYIVTKLLIFYVKIGELGVARKVFDGMPQRSVVAWNAMISGCARGGAEARA VEMFGSMRAEGMRPDQFTFASVLCACARLAALEHGRRVHGVMVKSRVGGGNVFVDSALVD MYLKCSSPEEARRAFAAAPARNVTMWTAVISGHGQHGRAAEALALFDRMTRVDGLRPNDV TFLAVLSACAHAGLVGEGLRHLSSMSSGYGLTPRGEHYAAAVDMLARVGRLGDAYELVKN LPDCQEHSVVWGALLGAGRKHGDVRLVELAARRFFRLQPGNAGKYVVLANAYAAREMWGS VAGAHEAMRSLGIKKDPAWSAVEVRGKRHTFLAGDSYHDERSAIYAACNALAAAVAEQSV PPVMDGDDASHCS

Transcript Sequence

Transcript ID	Os06t0625800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:25235825:25238208:-1 gene:Os06g0625800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0625800-01)
Sequence	GTTGTAAATGTAGTAGCCTGATTTCTCCTAGGTCTCGGATTTCATCTTGTATACACTACT AATCTGAGCGGCGCAGAGATGCGACGCCATTAGAGCGAGCTCGAATTCGGATAGAAGAGA GTTGGGCAGCTGGATCATGGGCTCCGTTGGCTTGGCGCGAATGCTGAGGTCGCTGTGCGT CGCCGGCGATCTCGCTAGGGCGGTGGGTCTCCTGTGGCGGAGTACGGTGTGCCCCGGTGA GGGGACCTACGCGCTTCTGCTGCAGGAATGCGTGAACCGGCGGGACGCGAGGATGGGGAA GAGGATCCACGCGCGCATGGTGTCGGTGGGGTTTGGCGGCGGCGTCTACATCGTCACCAA GCTGCTGATCTTTTACGTCAAGATCGGTGAGCTTGGTGTTGCGCGGAAGGTGTTCGACGG AATGCCGCAGAGGAGCGTCGTGGCGTGGAACGCCATGATATCCGGGTGCGCGCGCGGCGG CGCGGAGGCGCGGGCGGTGGAGATGTTTGGGTCGATGCGGGCGGAGGGGATGAGGCCGGA CCAGTTCACGTTCGCGTCGGTGCTCTGCGCGTGCGCGAGGCTGGCCGCGCTGGAGCACGG CCGGCGCGTGCACGGCGTCATGGTCAAGTCGCGCGTCGGCGGCGGCAACGTCTTCGTCGA CAGCGCGCTCGTCGACATGTACCTCAAGTGCAGCAGCCCCGAGGAGGCGCGCCGGGCGTT CGCGGCGGCGCCGGCGCGGAACGTCACCATGTGGACCGCCGTCATCTCCGGGCACGGCCA GCACGGGCGCGCCGCGGAGGCGCTGGCGCTGTTCGACCGGATGACGCGGGTGGACGGGCT CCGGCCGAACGACGTCACGTTCCTCGCCGTGCTCTCGGCGTGCGCGCACGCCGGGCTCGT CGGCGAGGGTCTGCGCCACCTCTCGTCCATGTCGTCGGGCTACGGCCTCACGCCGAGGGG CGAGCACTACGCGGCGGCGGTCGACATGCTCGCCAGGGTCGGCCGGCTCGGCGACGCCTA CGAGCTCGTCAAGAACCTGCCGGACTGCCAGGAGCACTCGGTGGTCTGGGGCGCGCTGCT CGGCGCCGGCAGGAAGCACGGCGACGTGAGGCTGGTCGAGCTCGCCGCGCGCCGCTTCTT CCGGCTGCAGCCGGGGAACGCCGGCAAGTACGTCGTCCTGGCGAACGCGTACGCCGCGCG CGAGATGTGGGGCAGCGTCGCCGGCGCGCACGAGGCGATGCGGTCGCTGGGAATCAAGAA GGATCCGGCCTGGAGCGCCGTCGAGGTCCGGGGCAAAAGGCACACCTTCCTCGCCGGCGA CTCGTACCACGACGAGCGCTCGGCGATATACGCGGCCTGCAACGCGTTGGCCGCCGCCGT CGCCGAGCAGTCCGTGCCTCCGGTTATGGATGGAGATGATGCCAGCCATTGCAGCTGAGC TGATTGGTGATGTGAAGTGGCATTGCATTTTCATCATTTGAGATGTTGCTTCTATGAAGC AACAAGCCTGCTAAATGATCGATTGTCAGTTGTCAGTTGTCACTCGCTCAATTTCATGAA CATTTGCAAATTTTGCATCCTCTTTCAAAGAGGGTTCAAAGAGATCACAGGGCCTGTAGA TTTTTTGCAACTTGAGAACTGTTGTGCCCTTGTTCTAGACCCACTGCAATTTTGATCTGT TATTAGCCGGGTTCGGGCTGCAACTACAAAAGTTGCATCTTGGAGAAATCTGATGCATGA GAAAATTGGCGCCAAGATAAACATATGGGAGAAGGTCCGGAGCAAACGACATGAAAGTAC ACCATTGTAATGTATTTACCCTTTTGCTCTATCCCAGTCACTGATCACGACCTTGCTTCC AGAATACTAGCATTATGTAACACAAGATCACATCACCTGTTCATGTTATTGAGATTCAGA ACACTTTGAATGACATCTGGTCCTAGTCTGTGGTTTGGATCCTTGCAGACTTGCAGAGCC ATGAAACAAATCCTCACTGTTCTCGAGTCACATGCAGATCCTCGAATGTCAGCAGTTCAG TAAGAATCAAATGTCAGTATGCGGATTGCCAGGAGACAGAAATACAGACAGGCAGACAGA CAGTACTGATTGTACCATGTGAAGAGGAAGTTTCTGAATGAAACACATGACAGAATCATC AGTGTGGTGACTGGTGAACTCAAAGAGAGTCTGAGACAAGAGATGGAACAGTAGAGGTCA GCTTCTGTGTCAGTATCTCTGTTTCTCCTCAAAATACTGTATCTCAAATGGATATTCCCA GATTACACTTGAACATTAGGAGAAAGAAAAGTTAAAGCAAAGATGTACAGCCTCTCTTTT GTACCAGGTGAGCATATTGAGGAACCAATACATATTATTTTTTC