Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0625400-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:25202059:25207810:-1 gene:Os06g0625400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Metalloendopeptidase. (Os06t0625400-01);Similar to cDNA clone:J013073O18, full insert sequence. (Os06t0625400-02)
Sequence	ATGTCAACTGCAAGTCCATTTGGTGCTATGGCAAGCCTTTTTGCACCAAAGCTACCTGGT GGCTTGGCTGCAAGCCTAACTGGTGAAAGATCACCTGCTGCGGATAAAATAAAGCCTGTG AAAAGGGAAAGACAGGCAATTAGGCCACCTGTAGAACATAAGTGGTCTCTTCCTGGAGTT GCCCAGGATGCCAAGCCTCCAGCAATTTTTCAACATGAATTGATCCAGAGTTTCTCAATC AACATGTTCTGTAAGATACCTGTTAACCAAGTTCAGACATATAAAGACCTGCGAAGTGTC CTGATGAAGCGGATATTTTTATCTGCTCTGCATTTTCGAATCAATACAAGATATAAGAGC TCAAATCCTCCTTTTACATCCGTCGAGCTGGATCATAGTGACTCTGGAAGGGAAGGTTGC ACTGTCACTACTCTTACAGTAACAGCTGAACCCCAGAATTGGAGGAGTGCCATCAAAGTT GCCGTTCATGAGGTTAGGAGACTCAAAGAGTTTGGTGTCACAATGGGGGAAATGACCCGC TACATGGATGCACTGATAAAAGATAGCGAGCAACTGGCTATGATGATTGATAGTGTTCCC TCAGTTGACAACTTGGACTTCATTATGGAGAGTGATGCACTTCGCCATACTGTTATGGAT CAATTGCAGGGGCATGAAAGTTTGCTTGCTGTTGCTGAAACCGTCACCCTTGAGGAGGTC AACACTGTTGGTGCAGAAGTTCTGGAATTTATTTCAGATTATGGAAAGCCTGATGCACCG CTTCCTGCTGCTATTGTGGCCTGTGTACCCAAAAAGGTCCACATGGATGGAGTAGGTGAA ACTGATTTTGAGATACATCCGGAAGAAATAACTGATTCCATCAAGGCGGGTCTTGAGGAA CCTATTTACCCAGAGCCTGAGCTCGAGGTGCCAAAAGAACTGATTACTCGGTCTGAGCTT GAGGACTTGAAATTGCAACGCAAACCATCATTTGCTTCTCTGAGTAAAGAGGAGAATGTT GTGAAAATATTTGACGATGAAACTGGTATAGCACAGCGCCGCCTTTCTAATGGAATTTCC ATCAATTATAAGATCACACAAAATGAGGCAAGGGTTGGTGTTATGCGACTGATAGTAGGT GGTGGGAGGGCAACAGAAGATTCTGAATCTAAGGGATCTGTTATTGTTGGTGTTCGTACT TTGAGTGAAGGTGGCTGTGTTGGCAACTTTTCAAGGGAACAGGTTGAACTTTTCTGTGTG AATAATCTCATAAACTGCTCATTAGAATCCAATGAGGAGTTCATTTTTATGGAGTTCAGA TTTGCTTTAAGAGACAATGGCATGCGCGCTGCTTTCCAACTCCTCCATATGGTCCTTGAG CATAATGTGTGGCTAGAAGATGCATTTGATAGAGCAACTCAGCTATACCTGTCTTACTAT CGCTCCATTCCCAAAAGTTTGGAGCGCTCTACAGCCCACAAGCTTATGTTAGCCATGTTG AACCATGATGAAAGGTTTGTAGAGCCATCACCACATTCATTGCAGAAATTGACTCTCCAA TCAGTCAAAGATGCTGTTATGAACCAGTTTGTTGGTGACAACATGGAGGTCAGTATTGTT GGTGATTTCACTGAAGAAGAGGTCGAATCTTGTGTTCTTGACTATCTTGGGACTGTGAGT GCTCCAAAATCTTCAAAAACACAGGAGCATATTGAGAAGATTTCCTTCCTGCCGTTTCCT TCGGACTTGCATTTTCAGCAAGTATACATAAAGGATACTGATGAGAGAGCTTGTGCCTAC ATTGCTGGCCCTGCACCTAATCGCTGGGGGTTTGCAACTGAAGGGAATGATCTATTCAAT GTCATCCGGAGTTCTAGTGGAGATGCTCAAGTTTCTGAATCAGCAAACACAGATCTTACG GAGAGGAAACATAATGACGTTCGCAGCCATTCTCTGTTCTTTGGCATCACTTTGAGTTTG TTGGCTGAAATTATTAATTCTAGGCTATTCACAACAGTTCGAGATTCCATGGGATTAACC TACGATGTTTCTTTTGAACTAAACCTTTTTGACAAATTGGACCTTGGTTGGTATGTGATT GCAGTAACATCAACCCCGAGCAAGGTTCATAAAGCTGTTGATGCATGCAAAGGTGTTCTC AGAGGATTACATAGTAACAAAATTGTTGAAAGGGAGCTGGACCGGGCAAAGAGGACGTTA TTGATGAAACATGAGGCTGAGACAAAGACAAATGCCTATTGGCTTGGTTTACTAGCCCAT CTGCAGTCTTCATCTGTGCCTAGAAAGGTGAAGCATAAATTGTTTGTGTGTGCGCTCCAC C

Peptide Sequence

PEP ID	Os06t0625400-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:25202059:25207810:-1 gene:Os06g0625400 transcript:Os06t0625400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Metalloendopeptidase. (Os06t0625400-01);Similar to cDNA clone:J013073O18, full insert sequence. (Os06t0625400-02)
Sequence	MSTASPFGAMASLFAPKLPGGLAASLTGERSPAADKIKPVKRERQAIRPPVEHKWSLPGV AQDAKPPAIFQHELIQSFSINMFCKIPVNQVQTYKDLRSVLMKRIFLSALHFRINTRYKS SNPPFTSVELDHSDSGREGCTVTTLTVTAEPQNWRSAIKVAVHEVRRLKEFGVTMGEMTR YMDALIKDSEQLAMMIDSVPSVDNLDFIMESDALRHTVMDQLQGHESLLAVAETVTLEEV NTVGAEVLEFISDYGKPDAPLPAAIVACVPKKVHMDGVGETDFEIHPEEITDSIKAGLEE PIYPEPELEVPKELITRSELEDLKLQRKPSFASLSKEENVVKIFDDETGIAQRRLSNGIS INYKITQNEARVGVMRLIVGGGRATEDSESKGSVIVGVRTLSEGGCVGNFSREQVELFCV NNLINCSLESNEEFIFMEFRFALRDNGMRAAFQLLHMVLEHNVWLEDAFDRATQLYLSYY RSIPKSLERSTAHKLMLAMLNHDERFVEPSPHSLQKLTLQSVKDAVMNQFVGDNMEVSIV GDFTEEEVESCVLDYLGTVSAPKSSKTQEHIEKISFLPFPSDLHFQQVYIKDTDERACAY IAGPAPNRWGFATEGNDLFNVIRSSSGDAQVSESANTDLTERKHNDVRSHSLFFGITLSL LAEIINSRLFTTVRDSMGLTYDVSFELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVL RGLHSNKIVERELDRAKRTLLMKHEAETKTNAYWLGLLAHLQSSSVPRKVKHKLFVCALH

Transcript Sequence

Transcript ID	Os06t0625400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:25202059:25207810:-1 gene:Os06g0625400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Metalloendopeptidase. (Os06t0625400-01);Similar to cDNA clone:J013073O18, full insert sequence. (Os06t0625400-02)
Sequence	CATTTGCACTCAGAAAACAAACTGAGCGAAAGATTCCCTATTGGACTTGAAGAGCAGATA CATAAATGGGATCCTGATAAGATCCGCAGATTTCATGAGCGTTGGTATTACCCTGCTAAT GCTACTTTATATCTGGTAGGAGAGATCGATGATATTCCCAGAGCAATACGAGAAATAGAG GCTGTGTTTGAACATACACTTCCAGAAGGTGAAGCAGCCCCTATGTCAACTGCAAGTCCA TTTGGTGCTATGGCAAGCCTTTTTGCACCAAAGCTACCTGGTGGCTTGGCTGCAAGCCTA ACTGGTGAAAGATCACCTGCTGCGGATAAAATAAAGCCTGTGAAAAGGGAAAGACAGGCA ATTAGGCCACCTGTAGAACATAAGTGGTCTCTTCCTGGAGTTGCCCAGGATGCCAAGCCT CCAGCAATTTTTCAACATGAATTGATCCAGAGTTTCTCAATCAACATGTTCTGTAAGATA CCTGTTAACCAAGTTCAGACATATAAAGACCTGCGAAGTGTCCTGATGAAGCGGATATTT TTATCTGCTCTGCATTTTCGAATCAATACAAGATATAAGAGCTCAAATCCTCCTTTTACA TCCGTCGAGCTGGATCATAGTGACTCTGGAAGGGAAGGTTGCACTGTCACTACTCTTACA GTAACAGCTGAACCCCAGAATTGGAGGAGTGCCATCAAAGTTGCCGTTCATGAGGTTAGG AGACTCAAAGAGTTTGGTGTCACAATGGGGGAAATGACCCGCTACATGGATGCACTGATA AAAGATAGCGAGCAACTGGCTATGATGATTGATAGTGTTCCCTCAGTTGACAACTTGGAC TTCATTATGGAGAGTGATGCACTTCGCCATACTGTTATGGATCAATTGCAGGGGCATGAA AGTTTGCTTGCTGTTGCTGAAACCGTCACCCTTGAGGAGGTCAACACTGTTGGTGCAGAA GTTCTGGAATTTATTTCAGATTATGGAAAGCCTGATGCACCGCTTCCTGCTGCTATTGTG GCCTGTGTACCCAAAAAGGTCCACATGGATGGAGTAGGTGAAACTGATTTTGAGATACAT CCGGAAGAAATAACTGATTCCATCAAGGCGGGTCTTGAGGAACCTATTTACCCAGAGCCT GAGCTCGAGGTGCCAAAAGAACTGATTACTCGGTCTGAGCTTGAGGACTTGAAATTGCAA CGCAAACCATCATTTGCTTCTCTGAGTAAAGAGGAGAATGTTGTGAAAATATTTGACGAT GAAACTGGTATAGCACAGCGCCGCCTTTCTAATGGAATTTCCATCAATTATAAGATCACA CAAAATGAGGCAAGGGTTGGTGTTATGCGACTGATAGTAGGTGGTGGGAGGGCAACAGAA GATTCTGAATCTAAGGGATCTGTTATTGTTGGTGTTCGTACTTTGAGTGAAGGTGGCTGT GTTGGCAACTTTTCAAGGGAACAGGTTGAACTTTTCTGTGTGAATAATCTCATAAACTGC TCATTAGAATCCAATGAGGAGTTCATTTTTATGGAGTTCAGATTTGCTTTAAGAGACAAT GGCATGCGCGCTGCTTTCCAACTCCTCCATATGGTCCTTGAGCATAATGTGTGGCTAGAA GATGCATTTGATAGAGCAACTCAGCTATACCTGTCTTACTATCGCTCCATTCCCAAAAGT TTGGAGCGCTCTACAGCCCACAAGCTTATGTTAGCCATGTTGAACCATGATGAAAGGTTT GTAGAGCCATCACCACATTCATTGCAGAAATTGACTCTCCAATCAGTCAAAGATGCTGTT ATGAACCAGTTTGTTGGTGACAACATGGAGGTCAGTATTGTTGGTGATTTCACTGAAGAA GAGGTCGAATCTTGTGTTCTTGACTATCTTGGGACTGTGAGTGCTCCAAAATCTTCAAAA ACACAGGAGCATATTGAGAAGATTTCCTTCCTGCCGTTTCCTTCGGACTTGCATTTTCAG CAAGTATACATAAAGGATACTGATGAGAGAGCTTGTGCCTACATTGCTGGCCCTGCACCT AATCGCTGGGGGTTTGCAACTGAAGGGAATGATCTATTCAATGTCATCCGGAGTTCTAGT GGAGATGCTCAAGTTTCTGAATCAGCAAACACAGATCTTACGGAGAGGAAACATAATGAC GTTCGCAGCCATTCTCTGTTCTTTGGCATCACTTTGAGTTTGTTGGCTGAAATTATTAAT TCTAGGCTATTCACAACAGTTCGAGATTCCATGGGATTAACCTACGATGTTTCTTTTGAA CTAAACCTTTTTGACAAATTGGACCTTGGTTGGTATGTGATTGCAGTAACATCAACCCCG AGCAAGGTTCATAAAGCTGTTGATGCATGCAAAGGTGTTCTCAGAGGATTACATAGTAAC AAAATTGTTGAAAGGGAGCTGGACCGGGCAAAGAGGACGTTATTGATGAAACATGAGGCT GAGACAAAGACAAATGCCTATTGGCTTGGTTTACTAGCCCATCTGCAGTCTTCATCTGTG CCTAGAAAGGTGAAGCATAAATTGTTTGTGTGTGCGCTCCACC