Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0618700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:24843829:24844743:-1 gene:Os06g0618700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 24 description:VQ domain containing protein. (Os06t0618700-01)
Sequence

ATGGGTGAGTGCAGCTACAACAGCATGAGCCCATCGACGCCGCTGCCGCCGCCGCCATCG
GCGGCGGCGGCGAAGAAGGGCTCGCCGGAGGCGGCGGCGGCGCACAAGGAGAGGCCCAAG
ATAAGGATCATCCACATCATTGCGCCAGAGATCATCAAGACCGACGTCGCCAACTTCCGG
GACCTCGTGCAGCGCCTCACCGGCAAGCAGCAGCAGCAGCAGCAAGAATCGGCAGAAACG
ACGTTGCCGCCGCCATCGCCGGTGGCGGTGCTCGACGAAAAGAAGGAGAAGGTCACCACC
AAGAAGAGGCCGGCGCCGGCGGAGGACGAGAGCATGATGAGGAAGAAGAAGAAGAAGAAG
ATCAAGTGCGAGGTGAAGGTGGAGGAAGGCCATGGATTTGGCTACGATCATCCCGATCAC
ACCGACCTGTGGATGGATCTGAATCCGGGAGGGTTCTTGAGCTTCTTGGAGGAGGAGGAC
GTGTTCCAAGGCATGGCTGCCGACCTGTTCCAATCGCCTCTTGGTTCATCGAGGATGGAT
TTCGTTGGTGAAATGTACGCATCTTAA

Peptide Sequence

PEP ID

Os06t0618700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:24843829:24844743:-1 gene:Os06g0618700 transcript:Os06t0618700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 24 description:VQ domain containing protein. (Os06t0618700-01)
Sequence

MGECSYNSMSPSTPLPPPPSAAAAKKGSPEAAAAHKERPKIRIIHIIAPEIIKTDVANFR
DLVQRLTGKQQQQQQESAETTLPPPSPVAVLDEKKEKVTTKKRPAPAEDESMMRKKKKKK
IKCEVKVEEGHGFGYDHPDHTDLWMDLNPGGFLSFLEEEDVFQGMAADLFQSPLGSSRMD
FVGEMYAS

Transcript Sequence

Transcript ID

Os06t0618700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:24843829:24844743:-1 gene:Os06g0618700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 24 description:VQ domain containing protein. (Os06t0618700-01)
Sequence

AAATCCTCATCTCCTCTCTTAGCTAAGATTGTTTGACAAAATAATCTCTAGCTTCTACAT
CACATCATATCACTTCCCTCTCTCAATCTTTTTCTCTCCTATCCTCTCCTCACACTAGCT
TAGCTTAGCTTAGCTAGCTACCATCGTCTTCTTCGTCTTCGGCGAGATATGGGTGAGTGC
AGCTACAACAGCATGAGCCCATCGACGCCGCTGCCGCCGCCGCCATCGGCGGCGGCGGCG
AAGAAGGGCTCGCCGGAGGCGGCGGCGGCGCACAAGGAGAGGCCCAAGATAAGGATCATC
CACATCATTGCGCCAGAGATCATCAAGACCGACGTCGCCAACTTCCGGGACCTCGTGCAG
CGCCTCACCGGCAAGCAGCAGCAGCAGCAGCAAGAATCGGCAGAAACGACGTTGCCGCCG
CCATCGCCGGTGGCGGTGCTCGACGAAAAGAAGGAGAAGGTCACCACCAAGAAGAGGCCG
GCGCCGGCGGAGGACGAGAGCATGATGAGGAAGAAGAAGAAGAAGAAGATCAAGTGCGAG
GTGAAGGTGGAGGAAGGCCATGGATTTGGCTACGATCATCCCGATCACACCGACCTGTGG
ATGGATCTGAATCCGGGAGGGTTCTTGAGCTTCTTGGAGGAGGAGGACGTGTTCCAAGGC
ATGGCTGCCGACCTGTTCCAATCGCCTCTTGGTTCATCGAGGATGGATTTCGTTGGTGAA
ATGTACGCATCTTAATTAGTATTTGGGATTAGAGGTTCAATTTCCTTTTGGTTTACTTTG
TGAGAATTTTTGCATTTTGGTTGAGAGGTTTGGATGGTCTTCAAAAAAGAAAAAGAGAGA
GAGAGAGAGAGAGAGAGAAGGGGATAAACACAATGGTGATGATGGTTAAGTAAGTATTGC
ACCCATGGTTGCAAT