Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0618000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:24805546:24808589:1 gene:Os06g0618000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nse4 domain containing protein. (Os06t0618000-01)
Sequence

ATGGCCGCGGCGGTGGAGGCGGAGGGGCGCGGGGGCGAGCCTGTGACGCCGGGGACGCCG
GCGCCGGACCTTAGCCAGGCGACGGACGACCGGCGGCTGCTGCGGTCGCGGTACCTCGCC
GTGAAGAGCCGCATCAGCGATGACAAGGATGACATGGCGAGGGCGGATTCGGTGAAGTTC
CGTGCAGTCTTCACGCAGGTGGAGGATCTCCACAGGCTTGTTCAGAGGCCTAGGGAGCAG
ATCGCCGATGCGGAAGCCTTGCTTGGCATCGCCACCAGTCTGGTGGCATCAGTAAGGACG
CATTCAGCTCTGGGGATCACGCCCTCTGATTTCGTTTCCGGAATGCTGAAGAAGTTTGGA
GAGAAGAGGAGGGATGATGATGAGGCTGCCTCGTTGCGCTGGCTCGATGTAGGCCTCTAC
ACTTCTCGGATTTTCATGGCCGTGCCTGGATGCTCCACAATGGTTGGTCCAATGAATACA
GAAGTGTTGCCACGGAGGGTTCGTGTGTGTAGAAAGAGGACGGCTAAGCCTCGTGGAAGT
GAATGCCCTGAACAGCTCCCAGATTCATCAAATGCAGCAAAGACGGATACTGACAGGAAC
ATGTCTGTCATATTTGATGTCCTGAGAAAGAAGAAAAATGCTAGGCTGGAAAACCTTGTT
TTAAACAGGAAGTCTTTTGCCCAAACGGTGGAGAATATCTTTGCCTTGTCATTCCTAGTG
AAAGATGGCAGGGTGGAAATCAGTGTCAATGATGAGGACCATCATCTTGTCTATCCAAGA
AATGCCCCTGCTGCTAGTGCCATAACCTCAGGAAAAGTAGTATACAATCATTTTGTATTC
AGATTCGATTTCAAGGATTGGAAGCTCATGAAAGACATGGTCGTCGACGGCGAGGAGCTG
ATGCAGCACAGGCCTCCGGCTCCACAAGTCGGCACGCACGGCTCCAGCACCACCACCACC
ACCACCACCACCGGAGGAGCGAATGAAGGCCCTGAGACCGAGACGCCTGCAGCCCCTGCA
CACAGCACGGCGATCAGGAAGCTCTGCAGGAACCGAGGCCTGGTCATGCACGACATGAAG
GAGGAGGCGGCCACCATGGAGGAGAAGAGGTCGGCCATGGACGCGCAGGTGTCTCAGCTG
GCGTCGAAGCGCAGGCGCCTCTTCCAGGACGACGACGATGACGACGGCGACTTGGAGTAG

Peptide Sequence

PEP ID

Os06t0618000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:24805546:24808589:1 gene:Os06g0618000 transcript:Os06t0618000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nse4 domain containing protein. (Os06t0618000-01)
Sequence

MAAAVEAEGRGGEPVTPGTPAPDLSQATDDRRLLRSRYLAVKSRISDDKDDMARADSVKF
RAVFTQVEDLHRLVQRPREQIADAEALLGIATSLVASVRTHSALGITPSDFVSGMLKKFG
EKRRDDDEAASLRWLDVGLYTSRIFMAVPGCSTMVGPMNTEVLPRRVRVCRKRTAKPRGS
ECPEQLPDSSNAAKTDTDRNMSVIFDVLRKKKNARLENLVLNRKSFAQTVENIFALSFLV
KDGRVEISVNDEDHHLVYPRNAPAASAITSGKVVYNHFVFRFDFKDWKLMKDMVVDGEEL
MQHRPPAPQVGTHGSSTTTTTTTTGGANEGPETETPAAPAHSTAIRKLCRNRGLVMHDMK
EEAATMEEKRSAMDAQVSQLASKRRRLFQDDDDDDGDLE

Transcript Sequence

Transcript ID

Os06t0618000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:24805546:24808589:1 gene:Os06g0618000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nse4 domain containing protein. (Os06t0618000-01)
Sequence

ATCGCACACCAAAATCTCTCCTCTCCTCTCCAACTCGCCCGCTGCTTCGTCTTCTGGAAG
GTTCGAGAAAACCTAGGGCACGCAGCGGATGGCCGCGGCGGTGGAGGCGGAGGGGCGCGG
GGGCGAGCCTGTGACGCCGGGGACGCCGGCGCCGGACCTTAGCCAGGCGACGGACGACCG
GCGGCTGCTGCGGTCGCGGTACCTCGCCGTGAAGAGCCGCATCAGCGATGACAAGGATGA
CATGGCGAGGGCGGATTCGGTGAAGTTCCGTGCAGTCTTCACGCAGGTGGAGGATCTCCA
CAGGCTTGTTCAGAGGCCTAGGGAGCAGATCGCCGATGCGGAAGCCTTGCTTGGCATCGC
CACCAGTCTGGTGGCATCAGTAAGGACGCATTCAGCTCTGGGGATCACGCCCTCTGATTT
CGTTTCCGGAATGCTGAAGAAGTTTGGAGAGAAGAGGAGGGATGATGATGAGGCTGCCTC
GTTGCGCTGGCTCGATGTAGGCCTCTACACTTCTCGGATTTTCATGGCCGTGCCTGGATG
CTCCACAATGGTTGGTCCAATGAATACAGAAGTGTTGCCACGGAGGGTTCGTGTGTGTAG
AAAGAGGACGGCTAAGCCTCGTGGAAGTGAATGCCCTGAACAGCTCCCAGATTCATCAAA
TGCAGCAAAGACGGATACTGACAGGAACATGTCTGTCATATTTGATGTCCTGAGAAAGAA
GAAAAATGCTAGGCTGGAAAACCTTGTTTTAAACAGGAAGTCTTTTGCCCAAACGGTGGA
GAATATCTTTGCCTTGTCATTCCTAGTGAAAGATGGCAGGGTGGAAATCAGTGTCAATGA
TGAGGACCATCATCTTGTCTATCCAAGAAATGCCCCTGCTGCTAGTGCCATAACCTCAGG
AAAAGTAGTATACAATCATTTTGTATTCAGATTCGATTTCAAGGATTGGAAGCTCATGAA
AGACATGGTCGTCGACGGCGAGGAGCTGATGCAGCACAGGCCTCCGGCTCCACAAGTCGG
CACGCACGGCTCCAGCACCACCACCACCACCACCACCACCGGAGGAGCGAATGAAGGCCC
TGAGACCGAGACGCCTGCAGCCCCTGCACACAGCACGGCGATCAGGAAGCTCTGCAGGAA
CCGAGGCCTGGTCATGCACGACATGAAGGAGGAGGCGGCCACCATGGAGGAGAAGAGGTC
GGCCATGGACGCGCAGGTGTCTCAGCTGGCGTCGAAGCGCAGGCGCCTCTTCCAGGACGA
CGACGATGACGACGGCGACTTGGAGTAGAGGGCAGTGGCCATGGTGGTAGTGGTAGTGGT
AGGAGGGGGGGGGGCGTGTAGAGGAGGAGGGAAAGCCTTTTATGTAGGTAGAGAAGCCAA
TCAGCTTAGCTTAGCATTGGGATGTCTTGTTAGGAAATGATGAAACGGCTTAGCGGCATT
GCACGGCCCGTGTCAGTTTTTGGATCGTTGGGCGTGTGGCGCTGAATGTTTTAAGGTCTT
TTGGTTATTTAGGCCAGTGTGTATGAACTGGACGACGCTATTTTACAGATAAATTGAAGT
CAAGTTATAAAGGTAGTGTTTGGCAGT