Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0613000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:24502484:24504664:-1 gene:Os06g0613000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0613000-01)
Sequence

GAGACTTGCGCCACATACAACCTGCTTAAGGTCTCACGAAACCTGTTCAGATGGACGAAG
GAAGGTAAATACACCGATCACTACGAGAGGCTACTTATCAATGGGATCATGGGCAACCAG
AGGGGAAAAGAGCCTGGTGTGATGATCTATTTTCTTCCCATGGGCCCGGGACGATCCAAG
AGCATCAGTGGCATGCCCACCTCTGGCCTACCCCCCAAGAACCCAGGGGGCTGGGGTAAT
GCAAATGCTACATTTTGGTGCTGCTATGGGACAGGGATAGAGTCATTCTCAAAGTTAGGG
GATTCCATCTACTTCTTGGAAGAGGGAGAAATCCCTGGGCTTTACATCATTCAGTACATA
CCAAGCACCTTTGATTGGAAAGCGGCAGGCCTGACTGTTAAGCAGCAGGCCAAACCACTG
TCCTCAACAGATTCTCACTTTGAGGTTTCAATCTTCATTTCTTCAAAGGGAGATGCCCGA
CCGGCAAATGTGAATGTGAGGATACCGTCATGGACATCCGTGGATGGAGCAATAGCAACT
CTAAATGGCCAAAAACTCAACTTGACATCTGCAGGCGATTTCCTCTCGGTGACGAAACTT
TGGGGCGATGACACCTTATCTCTCAAATTCCCCATCACCTTAAGAACCGAGCCGATCAAA
GATGATCGGCCGGAGTATTCGTCCATCCAAGCGGTGCTGTTCGGGCCTCACCTCCTCGCC
GGCCTGACGCACGGCAACCAGACCGTGAAAACCAGCAACGACTCCAACAGCGGCCTCACC
CCCGGCGTCTGGGAGGTGAACGCCACCCACGCCGCCGCCGCCGTCGCCGTCTGGGTCACC
CCGGTGTCGCAGTCGCTCAATTCGCAGCTCGTCACCCTCACGCAGCGCGACGGCGACGCG
CAGGCGGCGGCGGCGTTCGTCCTGTCGGTGTCGATCGCCGACGGCGCGCTAACGATGCAG
GAGTCCCCCGTCGCCGGGAGCGACGCGTGCGTGCACGCCACTTTCCGGGCCTACCACTCC
CCCTCCGGCGCCAGCGCCATCGACGCCGCCACCGGCAGGCTTCAGGGCCGCGACGTGGCG
CTCGAGCCGTTCGACCGGCCGGGCATGGCCGTCACCGACGCGCTCAGCGTCGGCCGGCCG
GGGCCGGCCACGCGGTTCAACGCCGTCGCCGGGCTGGACGGCCTCCCCGGCACGGTGTCC
CTGGAGCTCGCCACCAGGCCGGGATGCTTCGTGGCAGCCCCCACCACGGCCTACCTCGCC
GGCGCCAAGGCTCAGGTCAGCTGCCGGAAACCCACCGCCGCCGGCGGCGGCGAAGACGAC
GACGACACGGCGTTCCGCCGCGCCGCAAGCTTCACCCAGGCGGCACCTCTCCGTCTCTAC
CACCCGCTGAGCTTCTCGGCGACGGGCACCGACAGGAACTTCCTCCTGGAGCCATTGCAG
AGCCTCCAGGACGAGTTCTACACCGTCTACTTCAACGTCCTCACCAAGTGA

Peptide Sequence

PEP ID

Os06t0613000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:24502484:24504664:-1 gene:Os06g0613000 transcript:Os06t0613000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0613000-01)
Sequence

ETCATYNLLKVSRNLFRWTKEGKYTDHYERLLINGIMGNQRGKEPGVMIYFLPMGPGRSK
SISGMPTSGLPPKNPGGWGNANATFWCCYGTGIESFSKLGDSIYFLEEGEIPGLYIIQYI
PSTFDWKAAGLTVKQQAKPLSSTDSHFEVSIFISSKGDARPANVNVRIPSWTSVDGAIAT
LNGQKLNLTSAGDFLSVTKLWGDDTLSLKFPITLRTEPIKDDRPEYSSIQAVLFGPHLLA
GLTHGNQTVKTSNDSNSGLTPGVWEVNATHAAAAVAVWVTPVSQSLNSQLVTLTQRDGDA
QAAAAFVLSVSIADGALTMQESPVAGSDACVHATFRAYHSPSGASAIDAATGRLQGRDVA
LEPFDRPGMAVTDALSVGRPGPATRFNAVAGLDGLPGTVSLELATRPGCFVAAPTTAYLA
GAKAQVSCRKPTAAGGGEDDDDTAFRRAASFTQAAPLRLYHPLSFSATGTDRNFLLEPLQ
SLQDEFYTVYFNVLTK

Transcript Sequence

Transcript ID

Os06t0613000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:24502484:24504664:-1 gene:Os06g0613000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0613000-01)
Sequence

GGAGACTTGCGCCACATACAACCTGCTTAAGGTCTCACGAAACCTGTTCAGATGGACGAA
GGAAGGTAAATACACCGATCACTACGAGAGGCTACTTATCAATGGGATCATGGGCAACCA
GAGGGGAAAAGAGCCTGGTGTGATGATCTATTTTCTTCCCATGGGCCCGGGACGATCCAA
GAGCATCAGTGGCATGCCCACCTCTGGCCTACCCCCCAAGAACCCAGGGGGCTGGGGTAA
TGCAAATGCTACATTTTGGTGCTGCTATGGGACAGGGATAGAGTCATTCTCAAAGTTAGG
GGATTCCATCTACTTCTTGGAAGAGGGAGAAATCCCTGGGCTTTACATCATTCAGTACAT
ACCAAGCACCTTTGATTGGAAAGCGGCAGGCCTGACTGTTAAGCAGCAGGCCAAACCACT
GTCCTCAACAGATTCTCACTTTGAGGTTTCAATCTTCATTTCTTCAAAGGGAGATGCCCG
ACCGGCAAATGTGAATGTGAGGATACCGTCATGGACATCCGTGGATGGAGCAATAGCAAC
TCTAAATGGCCAAAAACTCAACTTGACATCTGCAGGCGATTTCCTCTCGGTGACGAAACT
TTGGGGCGATGACACCTTATCTCTCAAATTCCCCATCACCTTAAGAACCGAGCCGATCAA
AGATGATCGGCCGGAGTATTCGTCCATCCAAGCGGTGCTGTTCGGGCCTCACCTCCTCGC
CGGCCTGACGCACGGCAACCAGACCGTGAAAACCAGCAACGACTCCAACAGCGGCCTCAC
CCCCGGCGTCTGGGAGGTGAACGCCACCCACGCCGCCGCCGCCGTCGCCGTCTGGGTCAC
CCCGGTGTCGCAGTCGCTCAATTCGCAGCTCGTCACCCTCACGCAGCGCGACGGCGACGC
GCAGGCGGCGGCGGCGTTCGTCCTGTCGGTGTCGATCGCCGACGGCGCGCTAACGATGCA
GGAGTCCCCCGTCGCCGGGAGCGACGCGTGCGTGCACGCCACTTTCCGGGCCTACCACTC
CCCCTCCGGCGCCAGCGCCATCGACGCCGCCACCGGCAGGCTTCAGGGCCGCGACGTGGC
GCTCGAGCCGTTCGACCGGCCGGGCATGGCCGTCACCGACGCGCTCAGCGTCGGCCGGCC
GGGGCCGGCCACGCGGTTCAACGCCGTCGCCGGGCTGGACGGCCTCCCCGGCACGGTGTC
CCTGGAGCTCGCCACCAGGCCGGGATGCTTCGTGGCAGCCCCCACCACGGCCTACCTCGC
CGGCGCCAAGGCTCAGGTCAGCTGCCGGAAACCCACCGCCGCCGGCGGCGGCGAAGACGA
CGACGACACGGCGTTCCGCCGCGCCGCAAGCTTCACCCAGGCGGCACCTCTCCGTCTCTA
CCACCCGCTGAGCTTCTCGGCGACGGGCACCGACAGGAACTTCCTCCTGGAGCCATTGCA
GAGCCTCCAGGACGAGTTCTACACCGTCTACTTCAACGTCCTCACCAAGTGATCCACCGC
CATGTGACAGCGAGCCCAGCCTTGCCATGGACAGAATGACAGATCACCAAGCTTGTCCAT
GGCTTACACTACCTGTAATGGATATGAAATTAAACATAGTTAGTACCTAAGACCTGATTA
CCTAATTAACAATCTTCACCATGGCCGTGATGATTCAATCAATGCGTGCATGTGTGCTCG
TGATCCAGAAAGAAAGGGAAAGGCGATCC