Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0611500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:24384025:24386064:1 gene:Os06g0611500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase (Fragment). (Os06t0611500-01)
Sequence	ATGGCTTTCAGAAACCATGACGCTGCCATGGTCCTCTTCTTCTTCCTCCTCATGGTGACT ACCTACGCCAACGCGCACGGACACAGCAAGAAGCCCGAGGAGATCACTCAGGGCGTTTAC GGGGCGGCGGCGGCGGTGGCGGCCGGCCCCGGCGGCACGTTCGACATCACCAAGCTCGGC GCCGTCGGCAACGGCAGGGCGGACAGCACCGGCGCGGTGATGGCGGCGTGGAGGTCGGCG TGCGCCGGCGCCGGGAAGCAGACGATCCTGATCCCCAAGGGGGATTTCATGACGGGGGCG ATGGAGCTCAGGGGCCCCTGCAATGGCGCCGTGACCATCCAGCTCGACGGCAACCTGCTG GGCTCCAACGACCTCAGCAAGTACCCGGGCAAGAAGATGCCCAACTGGGTCGAGGTCCGC CATGTCGACAACTTCGTCATCTCCGGCAAGGGCAAGCTCGACGGCCAGGGCCCCGGCGTC TGGAGCAAGAACTCCTGCGCCAAGAACTACAACTGCAAGCTCCTCCCCAACACGCTGGTG CTGAACACGGTGAACGACGGGGTGGTGAGCGGGATCACGCTGCTGAACGCCAAGTTCTTC CACATGAACATCTACCGGTGCAAGGACATAAAGATCAGCGGCGTGACCATCAACGCCCCG GGGGACAGCCCCAACACCGACGGCATCCACATGGGCGACTCCTCCAAGATCACCATCGCC GCCACCACCATCGGCACCGGCGACGACTGCATCTCCATCGGCCCCGGCACCGACGGCGTC AACATCACCGGCGTCACCTGCGGCCCCGGCCACGGCATCAGCATCGGCAGCCTCGGCCGG TACAAGGACGAGCGGGACGTCCGGGACGTCTCCGTCACCCGCTGCGTCCTCCGCAAGACC ACCAATGGCCTCCGGATCAAGTCGTACGAGGACTCCGTGTCGCCGGTGACCGTGTCCAAG GTGTCCTACGACGGCGTCGTCATGGACCACGTCGACAACCCCATCATCATCGACCAGAAG TACTGCCCCAACAGCATCTGCACCAGCAAGGGCGACTCCAAGGTGTCCGTCAGGGACGTC ACCTTCAGGAACATCACCGGGTCGTCCAACACGCCGGCGGTCGTCCAGCTGCTCTGCTCC GGCAAGCTGCCGTGCAGCGGCGTCGCGATGCAGGACGTCAGGGTGCTGTACGGCGGCAGC GACAAGAAGACCACGGCCGTCTGCGACCACGCGCTGGGGAAGTCCACCGGGTGCCTCAAG GAGCTCGCTTGCCTCTAA

Peptide Sequence

PEP ID	Os06t0611500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:24384025:24386064:1 gene:Os06g0611500 transcript:Os06t0611500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase (Fragment). (Os06t0611500-01)
Sequence	MAFRNHDAAMVLFFFLLMVTTYANAHGHSKKPEEITQGVYGAAAAVAAGPGGTFDITKLG AVGNGRADSTGAVMAAWRSACAGAGKQTILIPKGDFMTGAMELRGPCNGAVTIQLDGNLL GSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNCKLLPNTLV LNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKITIA ATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVLRKT TNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSVRDV TFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKKTTAVCDHALGKSTGCLK ELACL

Transcript Sequence

Transcript ID	Os06t0611500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:24384025:24386064:1 gene:Os06g0611500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase (Fragment). (Os06t0611500-01)
Sequence	CGCCGGAGAGAGAAGCACCGGCGGTCAATAATTAAAAAAAAAGAAAAAAATGGCTTTCAG AAACCATGACGCTGCCATGGTCCTCTTCTTCTTCCTCCTCATGGTGACTACCTACGCCAA CGCGCACGGACACAGCAAGAAGCCCGAGGAGATCACTCAGGGCGTTTACGGGGCGGCGGC GGCGGTGGCGGCCGGCCCCGGCGGCACGTTCGACATCACCAAGCTCGGCGCCGTCGGCAA CGGCAGGGCGGACAGCACCGGCGCGGTGATGGCGGCGTGGAGGTCGGCGTGCGCCGGCGC CGGGAAGCAGACGATCCTGATCCCCAAGGGGGATTTCATGACGGGGGCGATGGAGCTCAG GGGCCCCTGCAATGGCGCCGTGACCATCCAGCTCGACGGCAACCTGCTGGGCTCCAACGA CCTCAGCAAGTACCCGGGCAAGAAGATGCCCAACTGGGTCGAGGTCCGCCATGTCGACAA CTTCGTCATCTCCGGCAAGGGCAAGCTCGACGGCCAGGGCCCCGGCGTCTGGAGCAAGAA CTCCTGCGCCAAGAACTACAACTGCAAGCTCCTCCCCAACACGCTGGTGCTGAACACGGT GAACGACGGGGTGGTGAGCGGGATCACGCTGCTGAACGCCAAGTTCTTCCACATGAACAT CTACCGGTGCAAGGACATAAAGATCAGCGGCGTGACCATCAACGCCCCGGGGGACAGCCC CAACACCGACGGCATCCACATGGGCGACTCCTCCAAGATCACCATCGCCGCCACCACCAT CGGCACCGGCGACGACTGCATCTCCATCGGCCCCGGCACCGACGGCGTCAACATCACCGG CGTCACCTGCGGCCCCGGCCACGGCATCAGCATCGGCAGCCTCGGCCGGTACAAGGACGA GCGGGACGTCCGGGACGTCTCCGTCACCCGCTGCGTCCTCCGCAAGACCACCAATGGCCT CCGGATCAAGTCGTACGAGGACTCCGTGTCGCCGGTGACCGTGTCCAAGGTGTCCTACGA CGGCGTCGTCATGGACCACGTCGACAACCCCATCATCATCGACCAGAAGTACTGCCCCAA CAGCATCTGCACCAGCAAGGGCGACTCCAAGGTGTCCGTCAGGGACGTCACCTTCAGGAA CATCACCGGGTCGTCCAACACGCCGGCGGTCGTCCAGCTGCTCTGCTCCGGCAAGCTGCC GTGCAGCGGCGTCGCGATGCAGGACGTCAGGGTGCTGTACGGCGGCAGCGACAAGAAGAC CACGGCCGTCTGCGACCACGCGCTGGGGAAGTCCACCGGGTGCCTCAAGGAGCTCGCTTG CCTCTAATGGATTATTAATTCGATCATCATCGATCTCTTTGTGTGTGTTCATCGTGTTTA AGAGACAGATCGAGGTTTGGAGAGCATATGGATGTATCCGCGTGTGTTCCTTGATTTTGA TCTTCCAAGTTAATGTCCATATCCTTTCTTTCTGTAAAATTAAGACCCAAAGCTGCCTCC TC