Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0611000-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:24361177:24363582:1 gene:Os06g0611000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 65kD microtubule associated protein. (Os06t0611000-01);Similar to Microtubule-associated protein MAP65-1a. (Os06t0611000-02)
Sequence	ATCGCTGGGAGTCTGCAAGTTGGTGACCACATGGAAACACCCCGTGTTAATGAGGATGAT CTTTCAACGAAGAAATTAAATGAATTTCTTTCTGAATTGCAAGCTCTACAAAAGGAAAAG AGCAATAGACTGCACAAGATTCTTGACTTCGTGAGTTCAGTGCATGATCTCTGTTCTGTC CTTGGGATGGATTTCCTGAGCACTGTTACTGAAGTTCATCCTAGTCTCAATGACTCGGTT GGTGCCGAGTTCAAGAGCATTAGTGACGCAACATTATCCAAGCTGTCTAAGATGGTAATT CAACTTAAAGAAGAGAAATCAAAGAGACTTGAAAGGATTCAAGCTCTAGCTTCCCAGCTA ACTGATCTTTGGAACCTAATGGACACCTCTGCTGATGAGCGACAACTTTTTGACCATGTC ACATGCAACATTTCCTCAACATTGGATGAAGTAACAGCACCAGGAGCTCTTGATATTGAT TTGATCGAACAGGCTGAACTTGAAGTTGAAAGGCTGGATCAGCTCAAAGCTAGTAGGATG AAGGATATTGCGTTCAAAAGGCAGACTGAACTTGAAGATATATATGCCCAGGCTCACATT ACGATAGATACCAGTGCTGCAAGAGATAGAATACTGACTGTTATTGATTCTAGTATCTTC GAGCCTTCGGAACTACTGGCTGATATGGAGAACCAGATACTTAAAGCAAAAGAAGAGGCA CTAAGCAGAAAGGACATTCTGGAGAAGGTTGAAAGGTGGATGTCAGCATGCGAAGAAGAG AGCTGGCTTGAAGACTATAGCCAGGACGACAACAGATACAGTGCAACCAGAGGTGCACAT CTGAACCTCAAGCGGGCAGAAAAGGCTCGTCTTTTGGTCAGTAAAATTCCAGTCATTGTT GATACACTGATGGCAAAGACCCGGGCATGGGAACAAGAGCATGGTATGCCGTTCAGCTAT GACGGTGTTCATCTTCTCGCAATGCTGGATGAGTACAAAGTACTAAGGCAGCAGAAGGAA GAAGAGAAGCGACGAATGAGGGACCAGAAGAAGATAAACGACCAGCTAGCTGCAGAGCAG GAGAAGCTCTTCGGCTCGAAACCGAGCCCAGCCCGGCCCCAATCCTCAAGGAAGGCGCCT GGCCCGCGGGCCAACGGTGGCGCAGTCAATGGCACACCGAACCGGAGGCTCTCGGCCCAC CAGAACGGCGGCGGCAGGTCGGTGAGCCGGGACGGGCGGAGGGACAGTGGCCGGCCGGCT GCTCCGGTGAACTACGTCGCCATCTGCAAGGAAGAGTCCAGCAACAACAACCCGGCGGCG TCCTCCCCCTGA

Peptide Sequence

PEP ID	Os06t0611000-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:24361177:24363582:1 gene:Os06g0611000 transcript:Os06t0611000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 65kD microtubule associated protein. (Os06t0611000-01);Similar to Microtubule-associated protein MAP65-1a. (Os06t0611000-02)
Sequence	IAGSLQVGDHMETPRVNEDDLSTKKLNEFLSELQALQKEKSNRLHKILDFVSSVHDLCSV LGMDFLSTVTEVHPSLNDSVGAEFKSISDATLSKLSKMVIQLKEEKSKRLERIQALASQL TDLWNLMDTSADERQLFDHVTCNISSTLDEVTAPGALDIDLIEQAELEVERLDQLKASRM KDIAFKRQTELEDIYAQAHITIDTSAARDRILTVIDSSIFEPSELLADMENQILKAKEEA LSRKDILEKVERWMSACEEESWLEDYSQDDNRYSATRGAHLNLKRAEKARLLVSKIPVIV DTLMAKTRAWEQEHGMPFSYDGVHLLAMLDEYKVLRQQKEEEKRRMRDQKKINDQLAAEQ EKLFGSKPSPARPQSSRKAPGPRANGGAVNGTPNRRLSAHQNGGGRSVSRDGRRDSGRPA APVNYVAICKEESSNNNPAASSP

Transcript Sequence

Transcript ID	Os06t0611000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:24361177:24363582:1 gene:Os06g0611000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 65kD microtubule associated protein. (Os06t0611000-01);Similar to Microtubule-associated protein MAP65-1a. (Os06t0611000-02)
Sequence	AATCGCTGGGAGTCTGCAAGTTGGTGACCACATGGAAACACCCCGTGTTAATGAGGATGA TCTTTCAACGAAGAAATTAAATGAATTTCTTTCTGAATTGCAAGCTCTACAAAAGGAAAA GAGCAATAGACTGCACAAGATTCTTGACTTCGTGAGTTCAGTGCATGATCTCTGTTCTGT CCTTGGGATGGATTTCCTGAGCACTGTTACTGAAGTTCATCCTAGTCTCAATGACTCGGT TGGTGCCGAGTTCAAGAGCATTAGTGACGCAACATTATCCAAGCTGTCTAAGATGGTAAT TCAACTTAAAGAAGAGAAATCAAAGAGACTTGAAAGGATTCAAGCTCTAGCTTCCCAGCT AACTGATCTTTGGAACCTAATGGACACCTCTGCTGATGAGCGACAACTTTTTGACCATGT CACATGCAACATTTCCTCAACATTGGATGAAGTAACAGCACCAGGAGCTCTTGATATTGA TTTGATCGAACAGGCTGAACTTGAAGTTGAAAGGCTGGATCAGCTCAAAGCTAGTAGGAT GAAGGATATTGCGTTCAAAAGGCAGACTGAACTTGAAGATATATATGCCCAGGCTCACAT TACGATAGATACCAGTGCTGCAAGAGATAGAATACTGACTGTTATTGATTCTAGTATCTT CGAGCCTTCGGAACTACTGGCTGATATGGAGAACCAGATACTTAAAGCAAAAGAAGAGGC ACTAAGCAGAAAGGACATTCTGGAGAAGGTTGAAAGGTGGATGTCAGCATGCGAAGAAGA GAGCTGGCTTGAAGACTATAGCCAGGACGACAACAGATACAGTGCAACCAGAGGTGCACA TCTGAACCTCAAGCGGGCAGAAAAGGCTCGTCTTTTGGTCAGTAAAATTCCAGTCATTGT TGATACACTGATGGCAAAGACCCGGGCATGGGAACAAGAGCATGGTATGCCGTTCAGCTA TGACGGTGTTCATCTTCTCGCAATGCTGGATGAGTACAAAGTACTAAGGCAGCAGAAGGA AGAAGAGAAGCGACGAATGAGGGACCAGAAGAAGATAAACGACCAGCTAGCTGCAGAGCA GGAGAAGCTCTTCGGCTCGAAACCGAGCCCAGCCCGGCCCCAATCCTCAAGGAAGGCGCC TGGCCCGCGGGCCAACGGTGGCGCAGTCAATGGCACACCGAACCGGAGGCTCTCGGCCCA CCAGAACGGCGGCGGCAGGTCGGTGAGCCGGGACGGGCGGAGGGACAGTGGCCGGCCGGC TGCTCCGGTGAACTACGTCGCCATCTGCAAGGAAGAGTCCAGCAACAACAACCCGGCGGC GTCCTCCCCCTGACGATCATCCTCGCCATGATTGACCGTACATTTCTTGGTGCCAGTGGT AGAGAGATACTCCATATCTGTGCAGTAGCAGGAAAAAAAGAAAAACTATAGCAAGATACT AGTAGGACAAGTGATTCGAATGATAGTAGCAGTATTTTGGCTGTATTTGAATCGATTTGT TGCTGTCC