Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0610800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:24348670:24353951:1 gene:Os06g0610800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0610800-01);Similar to Aspartic proteinase nepenthesin-1. (Os06t0610800-02)
Sequence	ATGGCTGCTGCTGCTGCTCGATGCGCCGGCCATGGCGGCGGCGGCGGCGGCGGCGGTTTC TTACTCCGGCGACGGCTGCTCGCCACCGCGGCGTTCCTGGCGGCGTTTGGGCTCTGCACT GCTGCTGCTGATGACGCTGCCACGGGGAGAGGACAAGGGCATGATCATGTGATGCTGAGC GTGGAGGACATGTTCCCTGACTCGTCGTCGTCGTCGCCGTCGTGCGACGCGCCGCCGCGA GATCACAGACATGACGCCACGTCATCAACCACTAGGATGACGATCGTCCACCGGCACGGC CCGTGCTCGCCGCTAGCCGCCGCGCACGGCGAGCCGCCGTCCCACGGCGAGATCCTCGCC GCCGACCAGAGCCGCGCCGAGTCGATCCAACACCGGGTGTCCACCACCACCACCGGCCGG GTGAATCCAAAGCGCAGACGCCACCGGCAGCAGCAGCCGCCGTCGGCGCCGGCGCCGGCG GCGTCGCTGTCGTCGTCCACCGCGTCGCTCCCGGCGTCGCCGGGGCGCGCGCTGGGCACA GGCAACTACGTGGTGACCGTGGGCCTCGGCACGCCGGCGTCGCGGTACACGGTGGTGTTC GACACCGGCAGCGACACGACGTGGGTGCAGTGCCAGCCGTGCGTGGTGGCGTGCTACGAG CAGCGGGAGAAGCTGTTCGACCCGGCGAGCTCGTCCACCTACGCCAACGTCTCCTGCGCC GCGCCGGCCTGCTCCGACCTCGACGTCAGCGGCTGCTCCGGCGGCCACTGCCTCTACGGC GTCCAGTACGGCGACGGCTCGTACTCCATTGGCTTCTTCGCCATGGACACCCTCACCCTC TCCTCCTACGACGCCGTCAAGGGGTTCCGGTTCGGCTGCGGCGAGAGGAACGACGGCTTG TTCGGCGAGGCGGCGGGGCTCCTCGGCCTCGGCCGCGGCAAGACGTCGCTGCCGGTGCAG ACGTACGGCAAGTACGGCGGCGTGTTCGCGCACTGCCTCCCGGCGAGGTCGACCGGCACG GGGTACCTCGACTTCGGCGCGGGCTCGCCGCCGGCGACGACGACGACGCCGATGCTGACG GGCAACGGGCCGACGTTCTACTACGTCGGCATGACGGGCATCCGCGTCGGCGGGCGGCTG CTGCCCATCGCGCCGTCGGTGTTCGCCGCCGCCGGCACGATCGTCGACTCCGGCACGGTG ATCACGCGCCTCCCGCCGGCGGCGTACTCGTCGCTCCGCTCCGCGTTCGCCGCCGCCATG GCGGCGCGCGGGTACAGGAAGGCGGCGGCGGTGTCGCTGCTGGACACGTGCTACGACTTC ACCGGGATGAGCCAGGTGGCGATCCCGACGGTGTCGCTGCTGTTCCAGGGCGGCGCGGCG CTGGACGTCGACGCGTCGGGGATCATGTACACGGTGAGCGCGTCGCAGGTGTGCCTCGCG TTCGCCGGCAACGAGGACGGCGGCGACGTCGGCATCGTCGGGAACACGCAGCTCAAGACG TTCGGCGTCGCCTACGACATCGGGAAGAAGGTGGTCGGCTTCTCCCCCGGAGCTTGCTGA

Peptide Sequence

PEP ID	Os06t0610800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:24348670:24353951:1 gene:Os06g0610800 transcript:Os06t0610800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0610800-01);Similar to Aspartic proteinase nepenthesin-1. (Os06t0610800-02)
Sequence	MAAAAARCAGHGGGGGGGGFLLRRRLLATAAFLAAFGLCTAAADDAATGRGQGHDHVMLS VEDMFPDSSSSSPSCDAPPRDHRHDATSSTTRMTIVHRHGPCSPLAAAHGEPPSHGEILA ADQSRAESIQHRVSTTTTGRVNPKRRRHRQQQPPSAPAPAASLSSSTASLPASPGRALGT GNYVVTVGLGTPASRYTVVFDTGSDTTWVQCQPCVVACYEQREKLFDPASSSTYANVSCA APACSDLDVSGCSGGHCLYGVQYGDGSYSIGFFAMDTLTLSSYDAVKGFRFGCGERNDGL FGEAAGLLGLGRGKTSLPVQTYGKYGGVFAHCLPARSTGTGYLDFGAGSPPATTTTPMLT GNGPTFYYVGMTGIRVGGRLLPIAPSVFAAAGTIVDSGTVITRLPPAAYSSLRSAFAAAM AARGYRKAAAVSLLDTCYDFTGMSQVAIPTVSLLFQGGAALDVDASGIMYTVSASQVCLA FAGNEDGGDVGIVGNTQLKTFGVAYDIGKKVVGFSPGAC

Transcript Sequence

Transcript ID	Os06t0610800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:24348670:24353951:1 gene:Os06g0610800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0610800-01);Similar to Aspartic proteinase nepenthesin-1. (Os06t0610800-02)
Sequence	GTGCGTTCCCTCCACTCGCGCGGGCTGAGCTTAGCTTAGCTCCCCACTCACTCGCCACTT GCTGCAATTGCAATGGCTGCTGCTGCTGCTCGATGCGCCGGCCATGGCGGCGGCGGCGGC GGCGGCGGTTTCTTACTCCGGCGACGGCTGCTCGCCACCGCGGCGTTCCTGGCGGCGTTT GGGCTCTGCACTGCTGCTGCTGATGACGCTGCCACGGGGAGAGGACAAGGGCATGATCAT GTGATGCTGAGCGTGGAGGACATGTTCCCTGACTCGTCGTCGTCGTCGCCGTCGTGCGAC GCGCCGCCGCGAGATCACAGACATGACGCCACGTCATCAACCACTAGGATGACGATCGTC CACCGGCACGGCCCGTGCTCGCCGCTAGCCGCCGCGCACGGCGAGCCGCCGTCCCACGGC GAGATCCTCGCCGCCGACCAGAGCCGCGCCGAGTCGATCCAACACCGGGTGTCCACCACC ACCACCGGCCGGGTGAATCCAAAGCGCAGACGCCACCGGCAGCAGCAGCCGCCGTCGGCG CCGGCGCCGGCGGCGTCGCTGTCGTCGTCCACCGCGTCGCTCCCGGCGTCGCCGGGGCGC GCGCTGGGCACAGGCAACTACGTGGTGACCGTGGGCCTCGGCACGCCGGCGTCGCGGTAC ACGGTGGTGTTCGACACCGGCAGCGACACGACGTGGGTGCAGTGCCAGCCGTGCGTGGTG GCGTGCTACGAGCAGCGGGAGAAGCTGTTCGACCCGGCGAGCTCGTCCACCTACGCCAAC GTCTCCTGCGCCGCGCCGGCCTGCTCCGACCTCGACGTCAGCGGCTGCTCCGGCGGCCAC TGCCTCTACGGCGTCCAGTACGGCGACGGCTCGTACTCCATTGGCTTCTTCGCCATGGAC ACCCTCACCCTCTCCTCCTACGACGCCGTCAAGGGGTTCCGGTTCGGCTGCGGCGAGAGG AACGACGGCTTGTTCGGCGAGGCGGCGGGGCTCCTCGGCCTCGGCCGCGGCAAGACGTCG CTGCCGGTGCAGACGTACGGCAAGTACGGCGGCGTGTTCGCGCACTGCCTCCCGGCGAGG TCGACCGGCACGGGGTACCTCGACTTCGGCGCGGGCTCGCCGCCGGCGACGACGACGACG CCGATGCTGACGGGCAACGGGCCGACGTTCTACTACGTCGGCATGACGGGCATCCGCGTC GGCGGGCGGCTGCTGCCCATCGCGCCGTCGGTGTTCGCCGCCGCCGGCACGATCGTCGAC TCCGGCACGGTGATCACGCGCCTCCCGCCGGCGGCGTACTCGTCGCTCCGCTCCGCGTTC GCCGCCGCCATGGCGGCGCGCGGGTACAGGAAGGCGGCGGCGGTGTCGCTGCTGGACACG TGCTACGACTTCACCGGGATGAGCCAGGTGGCGATCCCGACGGTGTCGCTGCTGTTCCAG GGCGGCGCGGCGCTGGACGTCGACGCGTCGGGGATCATGTACACGGTGAGCGCGTCGCAG GTGTGCCTCGCGTTCGCCGGCAACGAGGACGGCGGCGACGTCGGCATCGTCGGGAACACG CAGCTCAAGACGTTCGGCGTCGCCTACGACATCGGGAAGAAGGTGGTCGGCTTCTCCCCC GGAGCTTGCTGATGAAATGTGCCACGCGTCACCCCCAGCAAACGTACACGTCAGCACGCA GAATGAATTAACTGTCTGCACTCTGCAGTGTAATGCTGCAATCCACCAGGTGGTCAGCGA CTGGTTTTATTACCATGATTTCTGAAGATATATAATCATATGATTACAAATATGCT