Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0608800-04
CDS Infomation	cds chromosome:IRGSP-1.0:6:24229354:24234456:-1 gene:Os06g0608800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-02);Similar to Copine-1. (Os06t0608800-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-04)
Sequence	ATGGGGGCAAAGGACTCCAAGCCCTCATACAGCTATTCTTCTTCATATGATCATGGGAAT TCATCATCGGGATATAACTCGAGATACCCTGCATACCCTGCAAATGCATCTTCCAGTCAG AACACAAGGTATGCTCCTTCTATGGAGAACTATGTGCAGCCAGAAACGCATGCCAGGTTG CAGAGGAAGTACTCGAGGATTGGTGATGACTACCGCTCTCTGAATCAAGTGACTGAAGCT TTGGCACAAGCAGGTCTTGAATCATCAAATCTTATTGTAGGCATTGATTTTACAAAGAGC AATGAATGGACAGGTAAACTTTCCTTCAATCGCCGATGTCTGCATGATATTGGAAACACT CCAAATCCATATGAGCAAGCAATATCTATTATTGGAAGGACACTTTCAGCTTTTGATGAA GATAATTTGATTCCTTGCTTTGGATTTGGTGACGCATCAACTCATGATCAGGAGGTATTC AGCTTTTATCCAGAGAACCGCCCATGCAACGGATTTGAAGAGGCATTAGAAAGATACAGA GAAATTGTTCCGACTCTTCGATTAGCTGGACCAACATCTTTTGCCCCGATGATTGAAACA GCAATTGGTATTGTAGACAGCACTGGTGGTCAGTATCATGTTCTTCTGATAATAGCCGAT GGACAGGTTACTCGAAGTGTTGATACACAGTCTGGGCAGTTAAGCCCGCAGGAGCGTGAT ACGATTGATGCTATAGTAAAAGCTAGCCAGTTCCCCTTGTCTATTGTTCTTGTTGGGGTG GGTGATGGACCATGGGACATGATGCATCAGTTTGATGACAATATACCTGCTCGCTCATTT GACAATTTCCAGTTTGTGAATTTCACGGACATCATGTCAAAGAGCATAGCAGCTGACAGG AAGGAGGCAGAATTTGCACTATCCGCCTTGATGGAAATCCCAACACAATACAAGGCAACA CTTGATCTCCAACTTCTAGGCCGTCGCCAAAGAATACAGCCAAGAATTCCTCTGCCGCCA CCTATGAGGAATGCTTATTCGAGGTCTACTAGCTTTGACCAACATTCTGGTGTTTATTCA CGATCTAGTAGCTTCGGCCCACAAACAAGTGGCTTTCAGCAATCTGAAAGCTTCAAACAG AGACAGCCTGTGGCTACCACTGCACCTGACACTTATACCTCGGAAAGTTCTTTAGAAGGA AGACTTTTGTGCGCTATCTGTATGGATAAATCAAAGGATCTTGCATTTGGATGTGGACAT CAGACCTGTTATGAATGCGGGAAGAATTTGGTGCGCTGCCCTATGTGCCAGCAGCATATA ACCACAAGGATCAGGCTGTACTGA

Peptide Sequence

PEP ID	Os06t0608800-04
PEP Infomation	pep chromosome:IRGSP-1.0:6:24229354:24234456:-1 gene:Os06g0608800 transcript:Os06t0608800-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-02);Similar to Copine-1. (Os06t0608800-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-04)
Sequence	MGAKDSKPSYSYSSSYDHGNSSSGYNSRYPAYPANASSSQNTRYAPSMENYVQPETHARL QRKYSRIGDDYRSLNQVTEALAQAGLESSNLIVGIDFTKSNEWTGKLSFNRRCLHDIGNT PNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYR EIVPTLRLAGPTSFAPMIETAIGIVDSTGGQYHVLLIIADGQVTRSVDTQSGQLSPQERD TIDAIVKASQFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTDIMSKSIAADR KEAEFALSALMEIPTQYKATLDLQLLGRRQRIQPRIPLPPPMRNAYSRSTSFDQHSGVYS RSSSFGPQTSGFQQSESFKQRQPVATTAPDTYTSESSLEGRLLCAICMDKSKDLAFGCGH QTCYECGKNLVRCPMCQQHITTRIRLY

Transcript Sequence

Transcript ID	Os06t0608800-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:24229354:24234456:-1 gene:Os06g0608800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-02);Similar to Copine-1. (Os06t0608800-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0608800-04)
Sequence	AGGTCGCGTGCCTCCGCTCGCTCGCTCGCTCATCGTCGTCGTCTTCCTCGGGGCCTCTCT CGTCGTGGAGCGGAGGCGTGCCGCGTAGCAGGGGGAATTCAACTGAGGTGAGAAATGGGG GCAAAGGACTCCAAGCCCTCATACAGCTATTCTTCTTCATATGATCATGGGAATTCATCA TCGGGATATAACTCGAGATACCCTGCATACCCTGCAAATGCATCTTCCAGTCAGAACACA AGGTATGCTCCTTCTATGGAGAACTATGTGCAGCCAGAAACGCATGCCAGGTTGCAGAGG AAGTACTCGAGGATTGGTGATGACTACCGCTCTCTGAATCAAGTGACTGAAGCTTTGGCA CAAGCAGGTCTTGAATCATCAAATCTTATTGTAGGCATTGATTTTACAAAGAGCAATGAA TGGACAGGTAAACTTTCCTTCAATCGCCGATGTCTGCATGATATTGGAAACACTCCAAAT CCATATGAGCAAGCAATATCTATTATTGGAAGGACACTTTCAGCTTTTGATGAAGATAAT TTGATTCCTTGCTTTGGATTTGGTGACGCATCAACTCATGATCAGGAGGTATTCAGCTTT TATCCAGAGAACCGCCCATGCAACGGATTTGAAGAGGCATTAGAAAGATACAGAGAAATT GTTCCGACTCTTCGATTAGCTGGACCAACATCTTTTGCCCCGATGATTGAAACAGCAATT GGTATTGTAGACAGCACTGGTGGTCAGTATCATGTTCTTCTGATAATAGCCGATGGACAG GTTACTCGAAGTGTTGATACACAGTCTGGGCAGTTAAGCCCGCAGGAGCGTGATACGATT GATGCTATAGTAAAAGCTAGCCAGTTCCCCTTGTCTATTGTTCTTGTTGGGGTGGGTGAT GGACCATGGGACATGATGCATCAGTTTGATGACAATATACCTGCTCGCTCATTTGACAAT TTCCAGTTTGTGAATTTCACGGACATCATGTCAAAGAGCATAGCAGCTGACAGGAAGGAG GCAGAATTTGCACTATCCGCCTTGATGGAAATCCCAACACAATACAAGGCAACACTTGAT CTCCAACTTCTAGGCCGTCGCCAAAGAATACAGCCAAGAATTCCTCTGCCGCCACCTATG AGGAATGCTTATTCGAGGTCTACTAGCTTTGACCAACATTCTGGTGTTTATTCACGATCT AGTAGCTTCGGCCCACAAACAAGTGGCTTTCAGCAATCTGAAAGCTTCAAACAGAGACAG CCTGTGGCTACCACTGCACCTGACACTTATACCTCGGAAAGTTCTTTAGAAGGAAGACTT TTGTGCGCTATCTGTATGGATAAATCAAAGGATCTTGCATTTGGATGTGGACATCAGACC TGTTATGAATGCGGGAAGAATTTGGTGCGCTGCCCTATGTGCCAGCAGCATATAACCACA AGGATCAGGCTGTACTGAGAAAACAAAAATGGATATCCTGAAGTTTCTGAAGCCTGCAGA AACAGAATCTCCAACATCAGAAGAAACTCCTGTGCAAAATTTATGAACCAGCCTAAATTG TACTGTTCTTTCGTCTTGTAATTGGTGGTTTACTATTATTATTGCAGTGAGAAATGTTTA GGCAGATAGTGATCCATATAAAAAGCTAAGGCACACACTGTAGTATTAACTACAGTAGTT ATGTGAAGAAGAGGTACACTAAATAATGTACAGTAATTAGCTTCTCTATTATACATTCTC CTTTCTTTCCCTTGGTAAATAAGATAAAAGGTTGCAAAATTTCCAGG