Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0604500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:23935983:23940521:1 gene:Os06g0604500 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os06t0604500-01);Hypothetical conserved gene. (Os06t0604500-02)
Sequence	ATGCCCGGCGCGGCGGTCCACGCGGTGGACCCACGGGGCGGCGCCTCCCCGCCCCCCGTC GCCAAGGCGGAGGCGGCGACGGCTGCAGCGGCGGCGGCGGGAGGGTGCGAGCCGGCGCGG AAGGCGGGGGCGGTGACCATGGAGCACGTGCTGCTGGCGCTGCACGAGACGGAGGCGGAG AGGGAGGCGCGGATCCGGGAGATGTTCGCCTTCTTCGACGTGGACGGGCGCGGGCAGCTG GACTACGCGCAGATCGAGGCCGGGCTCGCCGCGCTGCAGATCCCCGCCGAGTGCAAGTAC GCGCGGGAGCTGCTCCGCGCCTGCGACCGCGACCGCGACGGCCGCGTCGGGTACGACGAC TTCAGGCGGTACATGGACGACAAGGAGCTCGAGCTCTACCGCATCTTCCAGGCCATCGAC GTCGAGCACAACGGCTGCATCCTCCCCGAGGAGCTCTGGGACGCGCTCGTCAAGGCTGGT ATAGAGATTGATGATGAGGAGCTTGCACGGTTTGTCGAGCATGTGGACAAGGACAACAAT GGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACC ATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCT GTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGG ATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATG CAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGT GGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGC GCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAA AATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTA GCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGT GTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGT CCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGA ATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGAT AGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCA ACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCA GAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTT TCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATT ACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGA

Peptide Sequence

PEP ID	Os06t0604500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:23935983:23940521:1 gene:Os06g0604500 transcript:Os06t0604500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os06t0604500-01);Hypothetical conserved gene. (Os06t0604500-02)
Sequence	MPGAAVHAVDPRGGASPPPVAKAEAATAAAAAAGGCEPARKAGAVTMEHVLLALHETEAE REARIREMFAFFDVDGRGQLDYAQIEAGLAALQIPAECKYARELLRACDRDRDGRVGYDD FRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDDEELARFVEHVDKDNN GIITFEEWRDFLLLYPNEVTIENIYHHWERVCLVDIGEQAVIPEGISKSVNASKYLIAGG IAGAASRTATAPLDRLKVIMQVQTTRTTVMHSIKDIWSQGGMLAFFRGNGLNVVKVAPES AIRFYAYEMLKEYIMKSKGENKSEVGPSERLVAGGLAGAVAQTAIYPVDLVKTRLQTYSC VDGKVPSLGALSRDILMHEGPRAFYRGLVPSLLGIVPYAGIDLAVYETLKDVSKTYILKD SDPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQRANSESAYRGMSDVFWRTLQHEGV SGFYKGILPNLLKVVPAASITYLVYEAMKKNLSLD

Transcript Sequence

Transcript ID	Os06t0604500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23935983:23940521:1 gene:Os06g0604500 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os06t0604500-01);Hypothetical conserved gene. (Os06t0604500-02)
Sequence	ATTCCCATTCCATTCCCCAAACCAACCCAACCCACCACCACCACCACCGGCGCCGCCGCC GCCGCCGCCTCCCCCTCACCCCCATTCCTTCCTCGCCGCCGGCGCCATGCCCGGCGCGGC GGTCCACGCGGTGGACCCACGGGGCGGCGCCTCCCCGCCCCCCGTCGCCAAGGCGGAGGC GGCGACGGCTGCAGCGGCGGCGGCGGGAGGGTGCGAGCCGGCGCGGAAGGCGGGGGCGGT GACCATGGAGCACGTGCTGCTGGCGCTGCACGAGACGGAGGCGGAGAGGGAGGCGCGGAT CCGGGAGATGTTCGCCTTCTTCGACGTGGACGGGCGCGGGCAGCTGGACTACGCGCAGAT CGAGGCCGGGCTCGCCGCGCTGCAGATCCCCGCCGAGTGCAAGTACGCGCGGGAGCTGCT CCGCGCCTGCGACCGCGACCGCGACGGCCGCGTCGGGTACGACGACTTCAGGCGGTACAT GGACGACAAGGAGCTCGAGCTCTACCGCATCTTCCAGGCCATCGACGTCGAGCACAACGG CTGCATCCTCCCCGAGGAGCTCTGGGACGCGCTCGTCAAGGCTGGTATAGAGATTGATGA TGAGGAGCTTGCACGGTTTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTT TGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTA TCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGG CATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGC ATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTAC ACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATT TTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTA TGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGT TGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAAT TTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGT ACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTA TAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGT ATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCC TCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCC TTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAG AGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAA AGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTA TGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGC CATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAA GTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGG CATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACAT CTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTG ACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTG CTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACT AGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGA AAACTGAGCATTTTGTC