Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0604200-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:23908918:23913796:-1 gene:Os06g0604200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 4 description:Chloroplast-localized phospholipase D, Herbivore defense (Os06t0604200-02)
Sequence	ATGGCGGAGCAGCAGCTGATGCATGGCACCCTCGACGCCACCATCTTCGAGGCCACCAAC CTCACCAACCCCACCCGCCTCACCGGCAGCGCCCCCGAGGGCATCCGCAAGTGGTGGGAA GGGGTGGAGAAGACGACCGGGGTTGGGCAGGGCGGGACGCGGCTGTACGCGACGGTGGAT CTCGGCAAGGCGCGGCTCGGCCGGACGCGGGTCATCGACGACGAGCCGGTGAACCCGCGG TGGGACGAGCGCTTCCACCTCTACTGCGCCCACTTCGCCGACAACGTCGTCTTCTCCGTC AAGGTCTCGCTGCCCATCGACGCCGCGCTCATCGGCCGCGCCTACCTCCCCGTCGGGGAC CTCCTGTCCGGCGAGGTCGTCGAGCGCAAGCTCGACATCCTCGACGAGCACAAGAATAAG CTCCCCCACGGGCCGACCATCCACGTCCGTCTGCAGTTCAAGGACGTCGCCGTCGACGGC GACGGGAAGTGGTGGGGCGCCGGCGTCGGCAACGCCGGGTACGCCGGCGTGCCGTGCACC TACTTCAAGCAGCACACCGGGTGCGGGGTCACCCTGTACCAGGACGCGCACGTGCCGGAC ACGTTCGCGCCGACGATCCCGCTCGCCGGCGGCGCGCACTACCAGCAGGGGCGGTGCTGG GAGGACGTGTTCGACGCCATCAGCAACGCCAAGCACCTCATATACATCACCGGCTGGTCG GTGTTCACCGACATCACGCTCATCCGCGACCCGTCCCGGCAGCGCCCCGGCGGCGACGCC ACCATCGGCGAGCTCCTCAAGCGCAAGGCCAGCGAGGGCGTCCGCGTGCTCATGCTGGTC TGGAACGACGTCACGTCGCTGCAGATCCTCCAGTCGCTCGGCATCAAGTGGGGCTTCAGC CAGACGCACGACGCCGAGACGTTCCAGTACTTCGAGGACACCGACGTCCACTGCGTCGTC TGCGCGCGCCACCCCGACGCCGGCGGCAGCATCGTCATGGGCGTCAAGGTGCCCTTCGCT TCCACCCACCACCAGAAGACCGTCATCGTCGACCACGACATGCCGGCCGGCGCCGGCTCC GGCCTCCGCAGCATCGTCAGCTTCGTCGGCGGCCTCGACCTCTGCGACGGCCGCTACGAC ACGCAGTCCCACTCCCTCTTCCGGACGCTCGACGCCGCGCACCACAAGGACTTCCACCAG CCGAGCATCGACGACGCCGAGCTCGCCAAGGGCGGGCCGAGGGAGCCATGGCACGACATC CACTCCAGGCTCGAGGGCCCCGTCGCCTGGGACGTCCTCTACAACTTCGAGCAGCGGTGG CGGAAGCAGAGCGGCCACGGCGACCTCCTCGTCAACCTCACCGCCCTCGAGCACCTCATT GCGCCGCAGTCCGCGATGAAGCTCCCCGTCATCGGCAACGACGACCACGAGGCGTGGAAC GTGCAGGTCTTCCGCTCCATCGACGGCGGCGCGTGCGACGGCTTCCCGAGCAGCCCGGAT GCGGCGGCGCGGCTCGACCTCGTGAGCGGGAAGAACAACGTGATCGAGCGGAGCATCCAG GACGCGTACATCCACGCCATCCGCCGCGCCAGGGACTTCATCTACATCGAGAACCAGTAC TTCATCGGGAGCTCCTACGGGTGGAGGCCCGACGACGGCGTCAGGCCGGAGGACGTCGAG GCGGTGAACCTGATCCCGAGGGAGCTCTCCCTCAAGATCATGAGCAAGATCGCCGCCGGC GAGCGGTTCACCGTCTACGTCGTGGTGCCGATGTGGCCGGAGGGCCACCCTGACAGCCAG GCCATGCAGGCCATCCTCGATTGGCAGAGGAGGACGATGGAGATGATGTACGCCGACATC GCCGGCGCGCTCAAGGCGAAGAGGATGGACGCCGACCCGAGGGATTACCTCACCTTCTTC TGCTTGGGAAACAGAGAGGTGAAGAGGAGTGGTGAGTATGTGCCCGGACATCACCCAAGA GATGGCACGCCATATGCCAAGGCACAAAAGACGCGCCGGTTCATGATCTATGTCCACTCC AAGATGATGATAGTCGATGACGAGTACATCATCGTGGGATCGGCCAACATCAACCAGAGG TCGATGGACGGCGGCCGAGACTCGGAGATCGCCATGGGAGCATTCCAGCCACACCACCTG AACATCGGTGGCCAGCTTGCAAGAGGTCAAATCCATGGCTTCCGGATGTCACTATGGTAT GAGCACCTAGGAGGCGAACCGCACGACGACTTCCTGCACCCGGGGAGCCTGGAGTGTGTC CGGAGAGTGAACGAGATGGCTAACAAGCACTGGGAGCTCTACGCCAGCGAGGAGCTCCAT GAAGACCTCCCGGGGCATCTGCTAACCTACCCGATCGCCGTGGCTAAGGACGGCACGGTG GCGGCGCTCCCGGGGGCGAAGTTCTTCCCGGACACCGAGGCGCCGGTGCTGGGGAAGAAG GCGATCAATCCGTTGATGACCCCCGATATCACCTCGTAG

Peptide Sequence

PEP ID	Os06t0604200-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:23908918:23913796:-1 gene:Os06g0604200 transcript:Os06t0604200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 4 description:Chloroplast-localized phospholipase D, Herbivore defense (Os06t0604200-02)
Sequence	MAEQQLMHGTLDATIFEATNLTNPTRLTGSAPEGIRKWWEGVEKTTGVGQGGTRLYATVD LGKARLGRTRVIDDEPVNPRWDERFHLYCAHFADNVVFSVKVSLPIDAALIGRAYLPVGD LLSGEVVERKLDILDEHKNKLPHGPTIHVRLQFKDVAVDGDGKWWGAGVGNAGYAGVPCT YFKQHTGCGVTLYQDAHVPDTFAPTIPLAGGAHYQQGRCWEDVFDAISNAKHLIYITGWS VFTDITLIRDPSRQRPGGDATIGELLKRKASEGVRVLMLVWNDVTSLQILQSLGIKWGFS QTHDAETFQYFEDTDVHCVVCARHPDAGGSIVMGVKVPFASTHHQKTVIVDHDMPAGAGS GLRSIVSFVGGLDLCDGRYDTQSHSLFRTLDAAHHKDFHQPSIDDAELAKGGPREPWHDI HSRLEGPVAWDVLYNFEQRWRKQSGHGDLLVNLTALEHLIAPQSAMKLPVIGNDDHEAWN VQVFRSIDGGACDGFPSSPDAAARLDLVSGKNNVIERSIQDAYIHAIRRARDFIYIENQY FIGSSYGWRPDDGVRPEDVEAVNLIPRELSLKIMSKIAAGERFTVYVVVPMWPEGHPDSQ AMQAILDWQRRTMEMMYADIAGALKAKRMDADPRDYLTFFCLGNREVKRSGEYVPGHHPR DGTPYAKAQKTRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPHHL NIGGQLARGQIHGFRMSLWYEHLGGEPHDDFLHPGSLECVRRVNEMANKHWELYASEELH EDLPGHLLTYPIAVAKDGTVAALPGAKFFPDTEAPVLGKKAINPLMTPDITS

Transcript Sequence

Transcript ID	Os06t0604200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23908918:23913796:-1 gene:Os06g0604200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 4 description:Chloroplast-localized phospholipase D, Herbivore defense (Os06t0604200-02)
Sequence	ACCATTAATTGCGAGCTGCTTCTTCTTCCCGTTCTTGTCAAGACTGAAACTCACTGGATC ATCGAGGAGTGGCAATGGCGGAGCAGCAGCTGATGCATGGCACCCTCGACGCCACCATCT TCGAGGCCACCAACCTCACCAACCCCACCCGCCTCACCGGCAGCGCCCCCGAGGGCATCC GCAAGTGGTGGGAAGGGGTGGAGAAGACGACCGGGGTTGGGCAGGGCGGGACGCGGCTGT ACGCGACGGTGGATCTCGGCAAGGCGCGGCTCGGCCGGACGCGGGTCATCGACGACGAGC CGGTGAACCCGCGGTGGGACGAGCGCTTCCACCTCTACTGCGCCCACTTCGCCGACAACG TCGTCTTCTCCGTCAAGGTCTCGCTGCCCATCGACGCCGCGCTCATCGGCCGCGCCTACC TCCCCGTCGGGGACCTCCTGTCCGGCGAGGTCGTCGAGCGCAAGCTCGACATCCTCGACG AGCACAAGAATAAGCTCCCCCACGGGCCGACCATCCACGTCCGTCTGCAGTTCAAGGACG TCGCCGTCGACGGCGACGGGAAGTGGTGGGGCGCCGGCGTCGGCAACGCCGGGTACGCCG GCGTGCCGTGCACCTACTTCAAGCAGCACACCGGGTGCGGGGTCACCCTGTACCAGGACG CGCACGTGCCGGACACGTTCGCGCCGACGATCCCGCTCGCCGGCGGCGCGCACTACCAGC AGGGGCGGTGCTGGGAGGACGTGTTCGACGCCATCAGCAACGCCAAGCACCTCATATACA TCACCGGCTGGTCGGTGTTCACCGACATCACGCTCATCCGCGACCCGTCCCGGCAGCGCC CCGGCGGCGACGCCACCATCGGCGAGCTCCTCAAGCGCAAGGCCAGCGAGGGCGTCCGCG TGCTCATGCTGGTCTGGAACGACGTCACGTCGCTGCAGATCCTCCAGTCGCTCGGCATCA AGTGGGGCTTCAGCCAGACGCACGACGCCGAGACGTTCCAGTACTTCGAGGACACCGACG TCCACTGCGTCGTCTGCGCGCGCCACCCCGACGCCGGCGGCAGCATCGTCATGGGCGTCA AGGTGCCCTTCGCTTCCACCCACCACCAGAAGACCGTCATCGTCGACCACGACATGCCGG CCGGCGCCGGCTCCGGCCTCCGCAGCATCGTCAGCTTCGTCGGCGGCCTCGACCTCTGCG ACGGCCGCTACGACACGCAGTCCCACTCCCTCTTCCGGACGCTCGACGCCGCGCACCACA AGGACTTCCACCAGCCGAGCATCGACGACGCCGAGCTCGCCAAGGGCGGGCCGAGGGAGC CATGGCACGACATCCACTCCAGGCTCGAGGGCCCCGTCGCCTGGGACGTCCTCTACAACT TCGAGCAGCGGTGGCGGAAGCAGAGCGGCCACGGCGACCTCCTCGTCAACCTCACCGCCC TCGAGCACCTCATTGCGCCGCAGTCCGCGATGAAGCTCCCCGTCATCGGCAACGACGACC ACGAGGCGTGGAACGTGCAGGTCTTCCGCTCCATCGACGGCGGCGCGTGCGACGGCTTCC CGAGCAGCCCGGATGCGGCGGCGCGGCTCGACCTCGTGAGCGGGAAGAACAACGTGATCG AGCGGAGCATCCAGGACGCGTACATCCACGCCATCCGCCGCGCCAGGGACTTCATCTACA TCGAGAACCAGTACTTCATCGGGAGCTCCTACGGGTGGAGGCCCGACGACGGCGTCAGGC CGGAGGACGTCGAGGCGGTGAACCTGATCCCGAGGGAGCTCTCCCTCAAGATCATGAGCA AGATCGCCGCCGGCGAGCGGTTCACCGTCTACGTCGTGGTGCCGATGTGGCCGGAGGGCC ACCCTGACAGCCAGGCCATGCAGGCCATCCTCGATTGGCAGAGGAGGACGATGGAGATGA TGTACGCCGACATCGCCGGCGCGCTCAAGGCGAAGAGGATGGACGCCGACCCGAGGGATT ACCTCACCTTCTTCTGCTTGGGAAACAGAGAGGTGAAGAGGAGTGGTGAGTATGTGCCCG GACATCACCCAAGAGATGGCACGCCATATGCCAAGGCACAAAAGACGCGCCGGTTCATGA TCTATGTCCACTCCAAGATGATGATAGTCGATGACGAGTACATCATCGTGGGATCGGCCA ACATCAACCAGAGGTCGATGGACGGCGGCCGAGACTCGGAGATCGCCATGGGAGCATTCC AGCCACACCACCTGAACATCGGTGGCCAGCTTGCAAGAGGTCAAATCCATGGCTTCCGGA TGTCACTATGGTATGAGCACCTAGGAGGCGAACCGCACGACGACTTCCTGCACCCGGGGA GCCTGGAGTGTGTCCGGAGAGTGAACGAGATGGCTAACAAGCACTGGGAGCTCTACGCCA GCGAGGAGCTCCATGAAGACCTCCCGGGGCATCTGCTAACCTACCCGATCGCCGTGGCTA AGGACGGCACGGTGGCGGCGCTCCCGGGGGCGAAGTTCTTCCCGGACACCGAGGCGCCGG TGCTGGGGAAGAAGGCGATCAATCCGTTGATGACCCCCGATATCACCTCGTAGATCAGGT GAAAGTTTGTGCTGGTGGTGCATGCGGAGCAAAAGTTTGCTAGTCCTACACTGGAGTGAT GCTGCTTCCATCAGAATGTGTTTGTTTTTCAACGGTGTAAGTTGTCCTAGAATGTCACCC TCTATGTAATGTTGAATCTTAATTCCATTGTCTAAAATAACCAAATTTGTAATGTTACTG GAACAAATTTTGTAATGATGAGTATGCACCTGCAAATCGATCACCCAGAGGAGGCCAACC