Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0603300-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:23863461:23864518:-1 gene:Os06g0603300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 23 description:VQ domain containing protein. (Os06t0603300-00)
Sequence

ATGGCCGCCGCGAGCTTCGACGGCGCCGGCGGGGCGCTCGGCGTGCACGCGGCGTCGCGC
AAGATCGGGAAATCGGCGGCGCATCAGCAGCAGCGGAAGCCGGTGATCATTTACATGGTG
TCGCCCAAGATCATCCACGTCGAGGCCCACGAGTTCATGTCGCTGGTGCAGCGGCTCACC
GGCCCGGGGGCGGCGGCCGCGGGCGACGGCGGCAAGAAGGCGGCGTCGTCGTCGCCGAGG
GAGGCGCGCAGGGGGGCGCCGCCGGTGCGCGTCAAGGCGCGGGCCCTGAACCGGCCCGCC
GGCGGCTCGGCCGTGTCCGTGTCGGTGACGGCGACGATGCGGCAGCAGCAGCAGCTCGCC
TCTCCGTCGTCGGCGGCGGCGGCCGGGCCGTCGCCGTCGCCGTCGACGGGGTTCCTGTTC
AACGACCTCAGCCCGCTCCGCGGCGCCGCGCTCAAGGGCGAGGCCGCCGCCGCCGCGCCG
CTCGTCTCCCCCGGCGCCGGCTGGCTTCAGCACGTCGGCGACCACTTCTTCAGCCCCGTC
GGCGCGCCGGGGGCGCTCGGCTCGCCGTCCGCCTTCCTCGACATCTTCGGGCCGCTGCCG
TCGCAGCACCAATAA

Peptide Sequence

PEP ID

Os06t0603300-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:23863461:23864518:-1 gene:Os06g0603300 transcript:Os06t0603300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 23 description:VQ domain containing protein. (Os06t0603300-00)
Sequence

MAAASFDGAGGALGVHAASRKIGKSAAHQQQRKPVIIYMVSPKIIHVEAHEFMSLVQRLT
GPGAAAAGDGGKKAASSSPREARRGAPPVRVKARALNRPAGGSAVSVSVTATMRQQQQLA
SPSSAAAAGPSPSPSTGFLFNDLSPLRGAALKGEAAAAAPLVSPGAGWLQHVGDHFFSPV
GAPGALGSPSAFLDIFGPLPSQHQ

Transcript Sequence

Transcript ID

Os06t0603300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:23863461:23864518:-1 gene:Os06g0603300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 23 description:VQ domain containing protein. (Os06t0603300-00)
Sequence

GCCTCTTGCTGTCCCACTCAAAATCTCTTTCGTGTCCACCTCACCTTGCACCACCTGCTC
CGCCGCCGCCGCCGCCGTCCTCGATCCATCCATGGCCGCCGCGAGCTTCGACGGCGCCGG
CGGGGCGCTCGGCGTGCACGCGGCGTCGCGCAAGATCGGGAAATCGGCGGCGCATCAGCA
GCAGCGGAAGCCGGTGATCATTTACATGGTGTCGCCCAAGATCATCCACGTCGAGGCCCA
CGAGTTCATGTCGCTGGTGCAGCGGCTCACCGGCCCGGGGGCGGCGGCCGCGGGCGACGG
CGGCAAGAAGGCGGCGTCGTCGTCGCCGAGGGAGGCGCGCAGGGGGGCGCCGCCGGTGCG
CGTCAAGGCGCGGGCCCTGAACCGGCCCGCCGGCGGCTCGGCCGTGTCCGTGTCGGTGAC
GGCGACGATGCGGCAGCAGCAGCAGCTCGCCTCTCCGTCGTCGGCGGCGGCGGCCGGGCC
GTCGCCGTCGCCGTCGACGGGGTTCCTGTTCAACGACCTCAGCCCGCTCCGCGGCGCCGC
GCTCAAGGGCGAGGCCGCCGCCGCCGCGCCGCTCGTCTCCCCCGGCGCCGGCTGGCTTCA
GCACGTCGGCGACCACTTCTTCAGCCCCGTCGGCGCGCCGGGGGCGCTCGGCTCGCCGTC
CGCCTTCCTCGACATCTTCGGGCCGCTGCCGTCGCAGCACCAATAATGATACAAATCTCA
CCGGAGCAACGGCGACGGCGACGGCGACGCAGTCGCTGTGCATGATGCATGGTCGCCAAT
TAGGGTTTTCCTCTCGCGACCTTGCACTTGCACGGCGTAATAATCGAAAAAGAAATTCCG
AAATGAGCTTAAAATCATCTTGGTTTGCATATGTATAGGCTTGTAAATTAATTAGTTCAT
CAAAATTGTAGATAATTTAGGTGGTTTACAAAATTTTCCCTTAATTGCTCGCATGGCTCT
ACACGCATGAGCCATGGCTGCAGCAAGGGAAGAGGTCGATCGAGTTGTGTTCTATTGATT
TGTTCATCTGATTATACATAGATGATTACCTTTTCTTT