Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0602400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:23806008:23811036:1 gene:Os06g0602400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52A description:Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related sequence 2). (Os06t0602400-01)
Sequence	CTCGCCGGCAGGGACCTGATGGCGTGCGCGCAGACGGGGTCCGGGAAGACGGCCGCGTTC TGCCTCCCCGTCGTGAGCGGCCTCGTCGCGGCGGGAGGGAGCGGAATCGGCCACCGGGAG AGGTCGTCGTTCAACCGCGCCGCCGCGAAGCCCCGCGCGCTCGTGCTAGCGCCCACGAGG GAGCTCGCCGCGCAGATTAATGAGGAGGCCAAGAAGTTCTCTTTCCAAACTGGACTTAGA GTTGTGGTGGCCTATGGAGGAACTCCAATGTATAACCAGCTCCGTGATCTAGAGAGGGGC GCTGATATTCTTGTTGCTACACCCGGTCGCCTTGTGGACATGGTTGAAAGATCAAAAGTC TCCCTTGAGGCAATCAAGTACCTGGTAATGGATGAAGCCGACAGGATGCTGGATATGGGC TTTGAGCCTCAGATAAGGAAGATTGTTGAAAGAATGAACATGCCAAGGAAGTCTGTGAGA CAAACTATGCTTTTCAGTGCAACCTTCCCACCAGAGATTCAGAGACTGGCTTCGGACTTT TTGTCGAACTACATATTTATCACTGTTGGGAGGGTGGGTTCAAGTACTGACCTAATTATG CAGAAGGTTGAACTCCTCTCTGACGGGGAGAAACGAGGCTACCTGCTTGATCTTTTACAG AGGCAATCTGTCGGTGTGGCTAACAGTAAGCTGCAGCAACCTCTGACATTGGTGTTTGTG GAGACAAAACGAGAGGCCGACTCTCTGAGGTACTGGCTATACAGCAAAGGTTTCCCTGCA ACAGCGATCCATGGTGACAGAACACAGCAGGAAAGGGAGAGCGCACTGAGATCCTTTAAG ACTGGCCTCACTCCTATAATGGTTGCCACTGATGTAGCCTCACGGGGCCTGGATGTCCCA AATGTTGCTCATGTGATCAACTACGATCTTCCCAAGAGCATAGAGGACTACGTCCACAGG ATTGGAAGAACTGGCAGAGCTGGGAAGGCTGGGTCAGCCACGGCCTTCTTCACTGAGTCT GACCACTCGCTGGCGAAGGGCTTACTGGAGCTGATGACCGAGGCGAAACAGGATGTTCCT GACTGGCTCGTACAGTATGCAGAGAGGCCGTACTATGGAGGTTCAAGCTACGGTGGAAGA AACCGGAGGTCTGGTGGCGGGGGCAACAGGTTTGCCGGCAGAGATTTCCGCCAGGGCAGT GGCGGCGGCTACTCAGGTGGTGGTGGTGGCGGCGGCTACTCAGGTGGTGGTGGTGGCGGC GGCTACTCAGGTGGTGGTGGTGGCTACTCAGGTGGTGGCCGTGGTGGTGGCTACTCACGC GGTGGCCGTGGTGGCTACTCAGGCGGAGGCGGTGGCGGTGGTGGAGACCCCTACCGAGCA AGTGCTCCACCCCCGCGGTACTACCCTTCGTACCCGATGGGCACGGCCGACATCAACGCC TCTGGCTGGGACTAA

Peptide Sequence

PEP ID	Os06t0602400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:23806008:23811036:1 gene:Os06g0602400 transcript:Os06t0602400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52A description:Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related sequence 2). (Os06t0602400-01)
Sequence	LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR ELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKV SLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDF LSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFV ETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVP NVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVP DWLVQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSGGGYSGGGGGGGYSGGGGGG GYSGGGGGYSGGGRGGGYSRGGRGGYSGGGGGGGGDPYRASAPPPRYYPSYPMGTADINA SGWD

Transcript Sequence

Transcript ID	Os06t0602400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23806008:23811036:1 gene:Os06g0602400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52A description:Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related sequence 2). (Os06t0602400-01)
Sequence	CGCTCGCCGGCAGGGACCTGATGGCGTGCGCGCAGACGGGGTCCGGGAAGACGGCCGCGT TCTGCCTCCCCGTCGTGAGCGGCCTCGTCGCGGCGGGAGGGAGCGGAATCGGCCACCGGG AGAGGTCGTCGTTCAACCGCGCCGCCGCGAAGCCCCGCGCGCTCGTGCTAGCGCCCACGA GGGAGCTCGCCGCGCAGATTAATGAGGAGGCCAAGAAGTTCTCTTTCCAAACTGGACTTA GAGTTGTGGTGGCCTATGGAGGAACTCCAATGTATAACCAGCTCCGTGATCTAGAGAGGG GCGCTGATATTCTTGTTGCTACACCCGGTCGCCTTGTGGACATGGTTGAAAGATCAAAAG TCTCCCTTGAGGCAATCAAGTACCTGGTAATGGATGAAGCCGACAGGATGCTGGATATGG GCTTTGAGCCTCAGATAAGGAAGATTGTTGAAAGAATGAACATGCCAAGGAAGTCTGTGA GACAAACTATGCTTTTCAGTGCAACCTTCCCACCAGAGATTCAGAGACTGGCTTCGGACT TTTTGTCGAACTACATATTTATCACTGTTGGGAGGGTGGGTTCAAGTACTGACCTAATTA TGCAGAAGGTTGAACTCCTCTCTGACGGGGAGAAACGAGGCTACCTGCTTGATCTTTTAC AGAGGCAATCTGTCGGTGTGGCTAACAGTAAGCTGCAGCAACCTCTGACATTGGTGTTTG TGGAGACAAAACGAGAGGCCGACTCTCTGAGGTACTGGCTATACAGCAAAGGTTTCCCTG CAACAGCGATCCATGGTGACAGAACACAGCAGGAAAGGGAGAGCGCACTGAGATCCTTTA AGACTGGCCTCACTCCTATAATGGTTGCCACTGATGTAGCCTCACGGGGCCTGGATGTCC CAAATGTTGCTCATGTGATCAACTACGATCTTCCCAAGAGCATAGAGGACTACGTCCACA GGATTGGAAGAACTGGCAGAGCTGGGAAGGCTGGGTCAGCCACGGCCTTCTTCACTGAGT CTGACCACTCGCTGGCGAAGGGCTTACTGGAGCTGATGACCGAGGCGAAACAGGATGTTC CTGACTGGCTCGTACAGTATGCAGAGAGGCCGTACTATGGAGGTTCAAGCTACGGTGGAA GAAACCGGAGGTCTGGTGGCGGGGGCAACAGGTTTGCCGGCAGAGATTTCCGCCAGGGCA GTGGCGGCGGCTACTCAGGTGGTGGTGGTGGCGGCGGCTACTCAGGTGGTGGTGGTGGCG GCGGCTACTCAGGTGGTGGTGGTGGCTACTCAGGTGGTGGCCGTGGTGGTGGCTACTCAC GCGGTGGCCGTGGTGGCTACTCAGGCGGAGGCGGTGGCGGTGGTGGAGACCCCTACCGAG CAAGTGCTCCACCCCCGCGGTACTACCCTTCGTACCCGATGGGCACGGCCGACATCAACG CCTCTGGCTGGGACTAAGCTGGAGCTCTCGGCGTCGTCCTCACTTCTCAGTGCACATACC GTATATACTACCATGCCTAAAATTACTTAGTAGGGGAACCAAAATGGCGGTGGGCACGCC TGGTCTCTGCTGCTCTTTTACCTTGTTGATCGCCTTGTCTCGTCTGATATACCTATACAA CGGTGGTGCACAGAGGTATGTGGCTCTGTTGGGAAGTTGGGGTTTTGGCCAGAATGGTGG TGGTGACATTGTGGTGATCAGGCTTCACTTGTTGCTTAAAACTTGTTACTATGTTATTGT AAGTGGCAGCTGATCGACACTGCTATATTTACCAGTGTTTAAGGAAGAACTTTATATTCC TTATTGATGCTGGATGTTTTTCTTC