Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0598800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:23608738:23611096:1 gene:Os06g0598800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WAX CRYSTAL-SPARSE LEAF 1 description:Similar to Fatty acid elongase 1-like protein. (Os06t0598800-01)
Sequence	ATGGAGACCTCGGCGGCGGCGGCGCCCAATGGCGGCGCGGCGGCGGCGGAGCAGCAGCAG CGGCGTCGGCTGCCGGACTTCCAGCAGTCGGTGAGGCTCAAGTACGTGAAGCTGGGGTAC CACTACCTCATCTCCCACGGCATGTACCTGCTGCTGTCGCCGCTGATGGCGCTGGTGGCC GTGCAGCTCTCCACCGTGTCCCCGGGCGACATCGCCGACCTGTGGGAGCAGCTCCGCTTC AACCTCCTCTCCGTCGTCGCCTGCTCCACCCTCCTCGTCTTCCTCTCCACCCTCTACTTC CTCACCCGCCCCCGCCCCGTCTACCTCCTCGACTTCGCCTGCTACAAGCCCGACCCCCAG CGCAAGTGCACCCGCGAGACCTTCATGCGCTGCTCCAGCCTCACCGGCTCCTTCACCGAC GCCAACCTCGACTTCCAGCGCAAGATCCTCGAGCGCTCCGGCCTCGGCGAGGACACCTAC CTCCCTCCCGCCGTGCTGCGCGTCCCGCCCAACCCGTGCATGGACGAGGCCCGCAAGGAG GCCCGCACCGTCATGTTCGGCGCCATTGACCAGCTTCTTGAGAAGACGGGTGTGAAGCCC AAGGACATTGGTGTGGTTGTCGTCAATTGCAGCTTGTTCAACCCGACGCCGTCGCTGTCC GCCATGGTTGTGAACCACTACAAGCTGAGGGGGAATGTCATCAGCTACAACCTCGGCGGG ATGGGGTGCAGTGCCGGCTTGCTGTCCGTCGATCTCGCCAAGGACTTGCTGCAGGTGCAC CCAAACTCGTACGCGCTGGTGGTCAGCATGGAGAACATCACGCTCAATTGGTACTTTGGC AACAACCGGTCGATGCTCGTGTCGAATTGCCTGTTCCGGATGGGCGGCGCCGCCATCCTG CTGTCGAACAGGCGGTCCGACCGCCGGAGGTCCAAGTATGAGCTTGTGCACACCGTGCGC ACGCACAAGGGCGCCAACGACAAGTGCTTTGGCTGTGTCACCCAGGAGGAAGACGAGATC GGCAAGATCGGCGTGTCGCTCTCCAAGGACCTGATGGCGGTGGCCGGAGACGCGCTGAAG ACGAACATCACCACCCTCGGGCCGCTCGTGCTCCCGTTGTCGGAGCAGCTGCTCTTCATG GCCACATTGGTTGCCAAGAAGGTCCTCAAGATGAAGATCAAGCCATACATTCCCGATTTC AAGCTGGCATTTGAGCATTTCTGCATCCATGCCGGTGGCCGTGCCGTGCTGGATGAGCTG GAGAAGAACTTGGAGTTGACTGACTGGCACATGGAGCCATCTAGGATGACACTGTACCGG TTTGGCAACACATCGAGCAGCTCACTCTGGTATGAGCTGGCGTACACCGAGGCGAAGGGG AGGATCAGGAAGCGGGACAGGATCTGGCAGATTGCATTTGGATCTGGTTTCAAGTGCAAC AGCGCAGTCTGGAAGGCGCTGCAAACAGTGAATCCAGCGAAGGAGAAGAACCCCTGGATG GATGAGATTGACAACTTCCCGGTTGAAGTTCCAAAGATATCAAAGGTTGGAAATGCATGA

Peptide Sequence

PEP ID	Os06t0598800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:23608738:23611096:1 gene:Os06g0598800 transcript:Os06t0598800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WAX CRYSTAL-SPARSE LEAF 1 description:Similar to Fatty acid elongase 1-like protein. (Os06t0598800-01)
Sequence	METSAAAAPNGGAAAAEQQQRRRLPDFQQSVRLKYVKLGYHYLISHGMYLLLSPLMALVA VQLSTVSPGDIADLWEQLRFNLLSVVACSTLLVFLSTLYFLTRPRPVYLLDFACYKPDPQ RKCTRETFMRCSSLTGSFTDANLDFQRKILERSGLGEDTYLPPAVLRVPPNPCMDEARKE ARTVMFGAIDQLLEKTGVKPKDIGVVVVNCSLFNPTPSLSAMVVNHYKLRGNVISYNLGG MGCSAGLLSVDLAKDLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAIL LSNRRSDRRRSKYELVHTVRTHKGANDKCFGCVTQEEDEIGKIGVSLSKDLMAVAGDALK TNITTLGPLVLPLSEQLLFMATLVAKKVLKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEL EKNLELTDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIRKRDRIWQIAFGSGFKCN SAVWKALQTVNPAKEKNPWMDEIDNFPVEVPKISKVGNA

Transcript Sequence

Transcript ID	Os06t0598800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23608738:23611096:1 gene:Os06g0598800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WAX CRYSTAL-SPARSE LEAF 1 description:Similar to Fatty acid elongase 1-like protein. (Os06t0598800-01)
Sequence	AGTTTCCACCTTTTCCCTCTCTTCCTCCGCTTATTAAAAGGCGGCGTCCCTCCCCGTGGT GCTCGCCGCCGTATTCAAGCGGAGGAAGAGAGAGAGAGAGAGAGAATCAAGGCAGTAGTC GTCTTCCTCTCCTCTCGCCGCCGCATCCGACCGGAGAAAGATCCCTTCTTTCCCTCCTCC AAGCCCGCCTCGGTATCCAGAGATGGAGACCTCGGCGGCGGCGGCGCCCAATGGCGGCGC GGCGGCGGCGGAGCAGCAGCAGCGGCGTCGGCTGCCGGACTTCCAGCAGTCGGTGAGGCT CAAGTACGTGAAGCTGGGGTACCACTACCTCATCTCCCACGGCATGTACCTGCTGCTGTC GCCGCTGATGGCGCTGGTGGCCGTGCAGCTCTCCACCGTGTCCCCGGGCGACATCGCCGA CCTGTGGGAGCAGCTCCGCTTCAACCTCCTCTCCGTCGTCGCCTGCTCCACCCTCCTCGT CTTCCTCTCCACCCTCTACTTCCTCACCCGCCCCCGCCCCGTCTACCTCCTCGACTTCGC CTGCTACAAGCCCGACCCCCAGCGCAAGTGCACCCGCGAGACCTTCATGCGCTGCTCCAG CCTCACCGGCTCCTTCACCGACGCCAACCTCGACTTCCAGCGCAAGATCCTCGAGCGCTC CGGCCTCGGCGAGGACACCTACCTCCCTCCCGCCGTGCTGCGCGTCCCGCCCAACCCGTG CATGGACGAGGCCCGCAAGGAGGCCCGCACCGTCATGTTCGGCGCCATTGACCAGCTTCT TGAGAAGACGGGTGTGAAGCCCAAGGACATTGGTGTGGTTGTCGTCAATTGCAGCTTGTT CAACCCGACGCCGTCGCTGTCCGCCATGGTTGTGAACCACTACAAGCTGAGGGGGAATGT CATCAGCTACAACCTCGGCGGGATGGGGTGCAGTGCCGGCTTGCTGTCCGTCGATCTCGC CAAGGACTTGCTGCAGGTGCACCCAAACTCGTACGCGCTGGTGGTCAGCATGGAGAACAT CACGCTCAATTGGTACTTTGGCAACAACCGGTCGATGCTCGTGTCGAATTGCCTGTTCCG GATGGGCGGCGCCGCCATCCTGCTGTCGAACAGGCGGTCCGACCGCCGGAGGTCCAAGTA TGAGCTTGTGCACACCGTGCGCACGCACAAGGGCGCCAACGACAAGTGCTTTGGCTGTGT CACCCAGGAGGAAGACGAGATCGGCAAGATCGGCGTGTCGCTCTCCAAGGACCTGATGGC GGTGGCCGGAGACGCGCTGAAGACGAACATCACCACCCTCGGGCCGCTCGTGCTCCCGTT GTCGGAGCAGCTGCTCTTCATGGCCACATTGGTTGCCAAGAAGGTCCTCAAGATGAAGAT CAAGCCATACATTCCCGATTTCAAGCTGGCATTTGAGCATTTCTGCATCCATGCCGGTGG CCGTGCCGTGCTGGATGAGCTGGAGAAGAACTTGGAGTTGACTGACTGGCACATGGAGCC ATCTAGGATGACACTGTACCGGTTTGGCAACACATCGAGCAGCTCACTCTGGTATGAGCT GGCGTACACCGAGGCGAAGGGGAGGATCAGGAAGCGGGACAGGATCTGGCAGATTGCATT TGGATCTGGTTTCAAGTGCAACAGCGCAGTCTGGAAGGCGCTGCAAACAGTGAATCCAGC GAAGGAGAAGAACCCCTGGATGGATGAGATTGACAACTTCCCGGTTGAAGTTCCAAAGAT ATCAAAGGTTGGAAATGCATGACATGAAATGCCTTGTTTGTCTCAAGAGTAGTAAAAAGT ATGGTGGGTTGAGTGGCATTGTGCATTGGCATTGGTAGGGCAGGAAGTTCATCTTCAGGG TTCTAAATCCATTTGCAATTGTTCAAGAGTTCTTTGGTTTTCAGTTGTAGCATCTGTGAG GGGAACTTTAAAAAGAAAACTGTAGCTGATTCAATTAGGTAGAAAAAGGGTGTGTTTTCT TCACTTAGGGCTGTCTGATAATGCTGTATTTATTCAGATTGGAGAAAACAATTGGAGTCT TCATGTGACGTTTATTCATCGTTGCCTGATTGTGATTGCCCTTGTAGCACTGTCACATTC TCATTAAATTTATCTCATTAAATTGATTGGTTT